RNA–Protein interactions for RNA: YKR055W

RHO4, Transcript of Non-essential small GTPase, yeastyeast

Gene RHO4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RHO4YKR055W MTC1P47018 478 aaKnown RBP11.55□□□□□ -0.56
RHO4YKR055W FAP1P53971 965 aa10.84□□□□□ -0.67
RHO4YKR055W DRS1P32892 752 aaKnown RBP10.39□□□□□ -0.75
RHO4YKR055W INO80P53115 1489 aa10.28□□□□□ -0.76
RHO4YKR055W MON2P48563 1636 aaPredicted RBP10.27□□□□□ -0.77
RHO4YKR055W PRY3P47033 881 aa10.22□□□□□ -0.77
RHO4YKR055W PRI1P10363 409 aa9.97□□□□□ -0.81
RHO4YKR055W AAD16Q02895 342 aa9.96□□□□□ -0.82
RHO4YKR055W RSE1Q04693 1361 aaKnown RBP9.78□□□□□ -0.84
RHO4YKR055W DNA2P38859 1522 aa9.74□□□□□ -0.85
RHO4YKR055W YCK3P39962 524 aa9.7□□□□□ -0.86
RHO4YKR055W ISW2Q08773 1120 aa9.64□□□□□ -0.87
RHO4YKR055W KOG1P38873 1557 aa9.6□□□□□ -0.87
RHO4YKR055W RPG1P38249 964 aaKnown RBP9.59□□□□□ -0.87
RHO4YKR055W HAA1Q12753 694 aaKnown RBP9.55□□□□□ -0.88
RHO4YKR055W SWR1Q05471 1514 aa9.51□□□□□ -0.89
RHO4YKR055W TSR3Q12094 313 aaKnown RBP9.43□□□□□ -0.9
RHO4YKR055W DIP2Q12220 943 aaPredicted RBP9.26□□□□□ -0.93
RHO4YKR055W SPA2P23201 1466 aaKnown RBP9.23□□□□□ -0.93
RHO4YKR055W TCB3Q03640 1545 aaKnown RBP9.16□□□□□ -0.94
RHO4YKR055W TY1B-DR4Q07793 1604 aa9.16□□□□□ -0.94
RHO4YKR055W RQC2Q12532 1038 aaKnown RBP9.1□□□□□ -0.95
RHO4YKR055W BFR2Q06631 534 aaKnown RBP9.07□□□□□ -0.96
RHO4YKR055W MRPL32P25348 183 aa9.03□□□□□ -0.96
RHO4YKR055W AVT3P36062 692 aa8.82□□□□□ -1
RHO4YKR055W RPL17AP05740 184 aaKnown RBP8.81□□□□□ -1
RHO4YKR055W RPL17BP46990 184 aaKnown RBP8.81□□□□□ -1
RHO4YKR055W MIF2P35201 549 aa8.8□□□□□ -1
RHO4YKR055W ECM5Q03214 1411 aa8.79□□□□□ -1
RHO4YKR055W REB1P21538 810 aa8.78□□□□□ -1
RHO4YKR055W YGL015CP33199 130 aa8.77□□□□□ -1.01
RHO4YKR055W SPT6P23615 1451 aaKnown RBP8.75□□□□□ -1.01
RHO4YKR055W HSL1P34244 1518 aa8.72□□□□□ -1.01
RHO4YKR055W THO2P53552 1597 aaKnown RBP8.69□□□□□ -1.02
RHO4YKR055W BUD4P47136 1447 aa8.68□□□□□ -1.02
RHO4YKR055W REV3P14284 1504 aa8.65□□□□□ -1.02
RHO4YKR055W MDS3P53094 1487 aa8.65□□□□□ -1.02
RHO4YKR055W CDC27P38042 758 aa8.54□□□□□ -1.04
RHO4YKR055W SGS1P35187 1447 aa8.53□□□□□ -1.04
RHO4YKR055W BPT1P14772 1559 aa8.49□□□□□ -1.05
RHO4YKR055W HIR3P47171 1648 aa8.49□□□□□ -1.05
RHO4YKR055W PEP1P32319 1579 aa8.44□□□□□ -1.06
RHO4YKR055W YKR023WP36119 530 aaKnown RBP8.42□□□□□ -1.06
RHO4YKR055W YFR006WP43590 535 aa8.42□□□□□ -1.06
RHO4YKR055W SPT21P35209 758 aa8.4□□□□□ -1.06
RHO4YKR055W YCF1P39109 1515 aaKnown RBP8.33□□□□□ -1.08
RHO4YKR055W MAP2P38174 421 aaKnown RBP8.31□□□□□ -1.08
RHO4YKR055W UBP10P53874 792 aaPredicted RBP8.3□□□□□ -1.08
RHO4YKR055W URN1Q06525 465 aaKnown RBP8.29□□□□□ -1.08
RHO4YKR055W ATG2P53855 1592 aa8.29□□□□□ -1.08
RHO4YKR055W HOP09932 586 aa8.25□□□□□ -1.09
RHO4YKR055W TAF2P23255 1407 aa8.25□□□□□ -1.09
RHO4YKR055W NOP2P40991 618 aaKnown RBP8.24□□□□□ -1.09
RHO4YKR055W XRN1P22147 1528 aaKnown RBP8.24□□□□□ -1.09
RHO4YKR055W DCD1P06773 312 aa8.23□□□□□ -1.09
RHO4YKR055W ABP1P15891 592 aaKnown RBP8.23□□□□□ -1.09
RHO4YKR055W TFC8Q12308 588 aa8.23□□□□□ -1.09
RHO4YKR055W MYO2P19524 1574 aaKnown RBP8.22□□□□□ -1.09
RHO4YKR055W LTE1P07866 1435 aa8.21□□□□□ -1.09
RHO4YKR055W BUD31P25337 157 aaPredicted RBP8.21□□□□□ -1.1
RHO4YKR055W TAF7Q05021 590 aa8.2□□□□□ -1.1
RHO4YKR055W SSK2P53599 1579 aa8.18□□□□□ -1.1
RHO4YKR055W MET5P47169 1442 aa8.17□□□□□ -1.1
RHO4YKR055W EBP2P36049 427 aaKnown RBP8.16□□□□□ -1.1
RHO4YKR055W CDC25P04821 1589 aa8.12□□□□□ -1.11
RHO4YKR055W RPA190P10964 1664 aaKnown RBP8.11□□□□□ -1.11
RHO4YKR055W CAB3P36076 571 aa8.11□□□□□ -1.11
RHO4YKR055W BNI1P41832 1953 aa8.1□□□□□ -1.11
RHO4YKR055W SKI3P17883 1432 aaKnown RBP8.09□□□□□ -1.11
RHO4YKR055W GEA2P39993 1459 aaKnown RBP8.07□□□□□ -1.12
RHO4YKR055W DNF1P32660 1571 aa8.06□□□□□ -1.12
RHO4YKR055W SCY1P53009 804 aa8.06□□□□□ -1.12
RHO4YKR055W ESC1Q03661 1658 aaKnown RBP8.05□□□□□ -1.12
RHO4YKR055W SIS2P36024 562 aa8.04□□□□□ -1.12
RHO4YKR055W RIM101P33400 625 aa8.03□□□□□ -1.12
RHO4YKR055W ITT1Q04638 464 aa8.02□□□□□ -1.13
RHO4YKR055W MMS1Q06211 1407 aa8.02□□□□□ -1.13
RHO4YKR055W IRC20Q06554 1556 aa8□□□□□ -1.13
RHO4YKR055W RKR1Q04781 1562 aa7.99□□□□□ -1.13
RHO4YKR055W UFD4P33202 1483 aa7.98□□□□□ -1.13
RHO4YKR055W RPO31P04051 1460 aa7.96□□□□□ -1.13
RHO4YKR055W SLX5P32828 619 aaKnown RBP7.96□□□□□ -1.14
RHO4YKR055W BCH2P36122 765 aa7.96□□□□□ -1.14
RHO4YKR055W TIF4632P39936 914 aaKnown RBP7.95□□□□□ -1.14
RHO4YKR055W TGL3P40308 642 aa7.95□□□□□ -1.14
RHO4YKR055W CHD1P32657 1468 aa7.94□□□□□ -1.14
RHO4YKR055W SIN3P22579 1536 aa7.93□□□□□ -1.14
RHO4YKR055W DRS2P39524 1355 aa7.88□□□□□ -1.15
RHO4YKR055W ESP1Q03018 1630 aa7.85□□□□□ -1.15
RHO4YKR055W PAN1P32521 1480 aa7.83□□□□□ -1.16
RHO4YKR055W DNF2Q12675 1612 aa7.81□□□□□ -1.16
RHO4YKR055W SCC2Q04002 1493 aa7.81□□□□□ -1.16
RHO4YKR055W NSR1P27476 414 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
RHO4YKR055W UBP9P39967 754 aa7.8□□□□□ -1.16
RHO4YKR055W SIS1P25294 352 aaKnown RBP7.78□□□□□ -1.16
RHO4YKR055W YPK9Q12697 1472 aa7.78□□□□□ -1.16
RHO4YKR055W OXP1P28273 1286 aa7.77□□□□□ -1.17
RHO4YKR055W TY1B-BRQ12193 1756 aa7.76□□□□□ -1.17
RHO4YKR055W TY1B-GR3Q12316 1755 aa7.76□□□□□ -1.17
RHO4YKR055W TY1B-ORQ92393 1755 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms