RNA–Protein interactions for RNA: YKL188C

PXA2, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeastyeast

Gene PXA2, Length 2,562 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXA2YKL188C MTC1P47018 478 aaKnown RBP6.81□□□□□ -1.32
PXA2YKL188C DRS1P32892 752 aaKnown RBP6.7□□□□□ -1.34
PXA2YKL188C FAP1P53971 965 aa5.78□□□□□ -1.48
PXA2YKL188C BFR2Q06631 534 aaKnown RBP5.75□□□□□ -1.49
PXA2YKL188C DIP2Q12220 943 aaPredicted RBP5.74□□□□□ -1.49
PXA2YKL188C ISW2Q08773 1120 aa5.61□□□□□ -1.51
PXA2YKL188C AVT3P36062 692 aa5.6□□□□□ -1.51
PXA2YKL188C PRI1P10363 409 aa5.54□□□□□ -1.52
PXA2YKL188C RPG1P38249 964 aaKnown RBP5.5□□□□□ -1.53
PXA2YKL188C AAD16Q02895 342 aa5.49□□□□□ -1.53
PXA2YKL188C RSE1Q04693 1361 aaKnown RBP5.49□□□□□ -1.53
PXA2YKL188C PRY3P47033 881 aa5.41□□□□□ -1.54
PXA2YKL188C RPL17AP05740 184 aaKnown RBP5.28□□□□□ -1.56
PXA2YKL188C RPL17BP46990 184 aaKnown RBP5.28□□□□□ -1.56
PXA2YKL188C TFA1P36100 482 aa5.28□□□□□ -1.56
PXA2YKL188C TSR3Q12094 313 aaKnown RBP5.26□□□□□ -1.57
PXA2YKL188C REB1P21538 810 aa5.25□□□□□ -1.57
PXA2YKL188C HAA1Q12753 694 aaKnown RBP5.11□□□□□ -1.59
PXA2YKL188C MRPL32P25348 183 aa5.1□□□□□ -1.59
PXA2YKL188C SPT21P35209 758 aa5.03□□□□□ -1.6
PXA2YKL188C YCK3P39962 524 aa5.02□□□□□ -1.61
PXA2YKL188C RIM101P33400 625 aa4.94□□□□□ -1.62
PXA2YKL188C YKR023WP36119 530 aaKnown RBP4.9□□□□□ -1.63
PXA2YKL188C CDC27P38042 758 aa4.83□□□□□ -1.64
PXA2YKL188C TFC8Q12308 588 aa4.82□□□□□ -1.64
PXA2YKL188C HOP09932 586 aa4.81□□□□□ -1.64
PXA2YKL188C YGL015CP33199 130 aa4.78□□□□□ -1.64
PXA2YKL188C YIL055CP40523 627 aaKnown RBP4.77□□□□□ -1.65
PXA2YKL188C OXP1P28273 1286 aa4.77□□□□□ -1.65
PXA2YKL188C DCD1P06773 312 aa4.76□□□□□ -1.65
PXA2YKL188C PTP3P40048 928 aa4.74□□□□□ -1.65
PXA2YKL188C YAH1Q12184 172 aaKnown RBP4.72□□□□□ -1.65
PXA2YKL188C UBP10P53874 792 aaPredicted RBP4.71□□□□□ -1.66
PXA2YKL188C SSP1P38871 571 aa4.69□□□□□ -1.66
PXA2YKL188C RSM7P47150 247 aa4.67□□□□□ -1.66
PXA2YKL188C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
PXA2YKL188C BCH2P36122 765 aa4.66□□□□□ -1.66
PXA2YKL188C MAP2P38174 421 aaKnown RBP4.66□□□□□ -1.66
PXA2YKL188C SCY1P53009 804 aa4.65□□□□□ -1.67
PXA2YKL188C BBC1P47068 1157 aa4.62□□□□□ -1.67
PXA2YKL188C YLR271WQ06152 274 aa4.62□□□□□ -1.67
PXA2YKL188C SLX5P32828 619 aaKnown RBP4.59□□□□□ -1.67
PXA2YKL188C AI2P03876 854 aa4.59□□□□□ -1.67
PXA2YKL188C EPS1P40557 701 aa4.59□□□□□ -1.67
PXA2YKL188C BDF1P35817 686 aa4.55□□□□□ -1.68
PXA2YKL188C TIF4632P39936 914 aaKnown RBP4.55□□□□□ -1.68
PXA2YKL188C MGA2P40578 1113 aa4.54□□□□□ -1.68
PXA2YKL188C PSD2P53037 1138 aaKnown RBP4.52□□□□□ -1.69
PXA2YKL188C TGL3P40308 642 aa4.47□□□□□ -1.69
PXA2YKL188C CST9Q06032 482 aa4.47□□□□□ -1.69
PXA2YKL188C MRM1P25270 412 aa4.45□□□□□ -1.7
PXA2YKL188C RQC2Q12532 1038 aaKnown RBP4.42□□□□□ -1.7
PXA2YKL188C RTG3P38165 486 aa4.39□□□□□ -1.71
PXA2YKL188C NSR1P27476 414 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
PXA2YKL188C YAP5P40574 245 aa4.37□□□□□ -1.71
PXA2YKL188C YOR238WQ08634 303 aa4.36□□□□□ -1.71
PXA2YKL188C YMR1P47147 688 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PXA2YKL188C RCR1P38212 213 aa4.32□□□□□ -1.72
PXA2YKL188C VPS29P38759 282 aa4.32□□□□□ -1.72
PXA2YKL188C MST1P07236 462 aa4.3□□□□□ -1.72
PXA2YKL188C GTT3P39996 337 aa4.3□□□□□ -1.72
PXA2YKL188C DBP1P24784 617 aaKnown RBP4.29□□□□□ -1.72
PXA2YKL188C RAM2P29703 316 aa4.29□□□□□ -1.72
PXA2YKL188C DMA1P38823 416 aa4.28□□□□□ -1.72
PXA2YKL188C UBP9P39967 754 aa4.28□□□□□ -1.72
PXA2YKL188C PIB1Q06651 286 aa4.28□□□□□ -1.72
PXA2YKL188C YFR006WP43590 535 aa4.27□□□□□ -1.73
PXA2YKL188C MAK11P20484 414 aaKnown RBP4.27□□□□□ -1.73
PXA2YKL188C STS1P38637 319 aa4.26□□□□□ -1.73
PXA2YKL188C MIF2P35201 549 aa4.22□□□□□ -1.73
PXA2YKL188C VMA1P17255 1071 aaKnown RBP4.22□□□□□ -1.73
PXA2YKL188C BUD31P25337 157 aaPredicted RBP4.21□□□□□ -1.74
PXA2YKL188C COQ8P27697 501 aa4.21□□□□□ -1.74
PXA2YKL188C WSC3Q12215 556 aa4.21□□□□□ -1.74
PXA2YKL188C SET1P38827 1080 aaKnown RBP4.19□□□□□ -1.74
PXA2YKL188C SAM3Q08986 587 aa4.19□□□□□ -1.74
PXA2YKL188C NOP53Q12080 455 aaKnown RBP4.19□□□□□ -1.74
PXA2YKL188C YBL029C-AQ3E756 94 aa4.19□□□□□ -1.74
PXA2YKL188C MSB4Q12317 492 aa4.18□□□□□ -1.74
PXA2YKL188C IFH1P39520 1085 aa4.17□□□□□ -1.74
PXA2YKL188C YOL036WQ08206 761 aa4.17□□□□□ -1.74
PXA2YKL188C ABP1P15891 592 aaKnown RBP4.16□□□□□ -1.74
PXA2YKL188C EDS1P38073 919 aa4.16□□□□□ -1.74
PXA2YKL188C VNX1P42839 908 aa4.16□□□□□ -1.74
PXA2YKL188C GYP5Q12344 894 aa4.16□□□□□ -1.74
PXA2YKL188C PTC3P34221 468 aaKnown RBP4.16□□□□□ -1.74
PXA2YKL188C SET4P42948 560 aa4.16□□□□□ -1.74
PXA2YKL188C SPP1Q03012 353 aa4.16□□□□□ -1.74
PXA2YKL188C GRE2Q12068 342 aaKnown RBP4.16□□□□□ -1.74
PXA2YKL188C EAP1P36041 632 aaKnown RBP4.15□□□□□ -1.74
PXA2YKL188C ATH1P48016 1211 aa4.15□□□□□ -1.74
PXA2YKL188C TIF11P38912 153 aaKnown RBP4.14□□□□□ -1.75
PXA2YKL188C GUT1P32190 709 aa4.12□□□□□ -1.75
PXA2YKL188C ULI1P43604 169 aa4.12□□□□□ -1.75
PXA2YKL188C HTA1P04911 132 aaKnown RBP4.12□□□□□ -1.75
PXA2YKL188C HTA2P04912 132 aa4.12□□□□□ -1.75
PXA2YKL188C DCW1P36091 449 aa4.11□□□□□ -1.75
PXA2YKL188C YPR148CQ06523 435 aa4.1□□□□□ -1.75
PXA2YKL188C VPS70P47161 811 aa4.09□□□□□ -1.75
PXA2YKL188C TRP5P00931 707 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms