RNA–Protein interactions for RNA: YKL111C

YKL111C, Transcript of Dubious open reading frame, yeastyeast

Gene YKL111C, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKL111CYKL111C MTC1P47018 478 aaKnown RBP8.94□□□□□ -0.98
YKL111CYKL111C DRS1P32892 752 aaKnown RBP8.78□□□□□ -1
YKL111CYKL111C FAP1P53971 965 aa8.24□□□□□ -1.09
YKL111CYKL111C PRY3P47033 881 aa7.77□□□□□ -1.17
YKL111CYKL111C DIP2Q12220 943 aaPredicted RBP7.55□□□□□ -1.2
YKL111CYKL111C BFR2Q06631 534 aaKnown RBP7.51□□□□□ -1.21
YKL111CYKL111C AVT3P36062 692 aa7.47□□□□□ -1.21
YKL111CYKL111C AAD16Q02895 342 aa7.47□□□□□ -1.21
YKL111CYKL111C PRI1P10363 409 aa7.46□□□□□ -1.22
YKL111CYKL111C YCK3P39962 524 aa7.38□□□□□ -1.23
YKL111CYKL111C ISW2Q08773 1120 aa7.25□□□□□ -1.25
YKL111CYKL111C HAA1Q12753 694 aaKnown RBP7.24□□□□□ -1.25
YKL111CYKL111C RPG1P38249 964 aaKnown RBP7.19□□□□□ -1.26
YKL111CYKL111C RSE1Q04693 1361 aaKnown RBP7.15□□□□□ -1.26
YKL111CYKL111C TSR3Q12094 313 aaKnown RBP7.04□□□□□ -1.28
YKL111CYKL111C TFA1P36100 482 aa7.03□□□□□ -1.28
YKL111CYKL111C RPL17AP05740 184 aaKnown RBP6.89□□□□□ -1.31
YKL111CYKL111C RPL17BP46990 184 aaKnown RBP6.89□□□□□ -1.31
YKL111CYKL111C REB1P21538 810 aa6.77□□□□□ -1.33
YKL111CYKL111C MRPL32P25348 183 aa6.73□□□□□ -1.33
YKL111CYKL111C SPT21P35209 758 aa6.72□□□□□ -1.33
YKL111CYKL111C YGL015CP33199 130 aa6.6□□□□□ -1.35
YKL111CYKL111C RIM101P33400 625 aa6.58□□□□□ -1.36
YKL111CYKL111C YKR023WP36119 530 aaKnown RBP6.52□□□□□ -1.37
YKL111CYKL111C CDC27P38042 758 aa6.42□□□□□ -1.38
YKL111CYKL111C OXP1P28273 1286 aa6.38□□□□□ -1.39
YKL111CYKL111C TFC8Q12308 588 aa6.37□□□□□ -1.39
YKL111CYKL111C HOP09932 586 aa6.34□□□□□ -1.39
YKL111CYKL111C DCD1P06773 312 aa6.31□□□□□ -1.4
YKL111CYKL111C BUD31P25337 157 aaPredicted RBP6.29□□□□□ -1.4
YKL111CYKL111C MAP2P38174 421 aaKnown RBP6.2□□□□□ -1.42
YKL111CYKL111C UBP10P53874 792 aaPredicted RBP6.19□□□□□ -1.42
YKL111CYKL111C BCH2P36122 765 aa6.18□□□□□ -1.42
YKL111CYKL111C PTP3P40048 928 aa6.16□□□□□ -1.42
YKL111CYKL111C YIL055CP40523 627 aaKnown RBP6.16□□□□□ -1.42
YKL111CYKL111C YAH1Q12184 172 aaKnown RBP6.16□□□□□ -1.42
YKL111CYKL111C SSP1P38871 571 aa6.15□□□□□ -1.42
YKL111CYKL111C YLR271WQ06152 274 aa6.15□□□□□ -1.42
YKL111CYKL111C RSM7P47150 247 aa6.14□□□□□ -1.43
YKL111CYKL111C SCY1P53009 804 aa6.07□□□□□ -1.44
YKL111CYKL111C AI2P03876 854 aa6.04□□□□□ -1.44
YKL111CYKL111C EPS1P40557 701 aa6.04□□□□□ -1.44
YKL111CYKL111C PSD2P53037 1138 aaKnown RBP6.02□□□□□ -1.45
YKL111CYKL111C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
YKL111CYKL111C BDF1P35817 686 aa6.01□□□□□ -1.45
YKL111CYKL111C MGA2P40578 1113 aa5.96□□□□□ -1.46
YKL111CYKL111C BBC1P47068 1157 aa5.96□□□□□ -1.46
YKL111CYKL111C CST9Q06032 482 aa5.96□□□□□ -1.46
YKL111CYKL111C SLX5P32828 619 aaKnown RBP5.95□□□□□ -1.46
YKL111CYKL111C SIS1P25294 352 aaKnown RBP5.93□□□□□ -1.46
YKL111CYKL111C TIF4632P39936 914 aaKnown RBP5.92□□□□□ -1.46
YKL111CYKL111C TGL3P40308 642 aa5.92□□□□□ -1.46
YKL111CYKL111C UBP9P39967 754 aa5.88□□□□□ -1.47
YKL111CYKL111C MRM1P25270 412 aa5.84□□□□□ -1.47
YKL111CYKL111C RCR1P38212 213 aa5.78□□□□□ -1.48
YKL111CYKL111C NSR1P27476 414 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
YKL111CYKL111C VPS29P38759 282 aa5.76□□□□□ -1.49
YKL111CYKL111C RAM2P29703 316 aa5.74□□□□□ -1.49
YKL111CYKL111C RTG3P38165 486 aa5.74□□□□□ -1.49
YKL111CYKL111C MST1P07236 462 aa5.7□□□□□ -1.5
YKL111CYKL111C DMA1P38823 416 aa5.7□□□□□ -1.5
YKL111CYKL111C STS1P38637 319 aa5.67□□□□□ -1.5
YKL111CYKL111C YAP5P40574 245 aa5.67□□□□□ -1.5
YKL111CYKL111C YMR1P47147 688 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
YKL111CYKL111C YOR238WQ08634 303 aa5.65□□□□□ -1.5
YKL111CYKL111C DBP1P24784 617 aaKnown RBP5.63□□□□□ -1.51
YKL111CYKL111C YBL029C-AQ3E756 94 aa5.63□□□□□ -1.51
YKL111CYKL111C MAK11P20484 414 aaKnown RBP5.62□□□□□ -1.51
YKL111CYKL111C YFR006WP43590 535 aa5.62□□□□□ -1.51
YKL111CYKL111C RQC2Q12532 1038 aaKnown RBP5.62□□□□□ -1.51
YKL111CYKL111C PIB1Q06651 286 aa5.6□□□□□ -1.51
YKL111CYKL111C EDS1P38073 919 aa5.56□□□□□ -1.52
YKL111CYKL111C VMA1P17255 1071 aaKnown RBP5.55□□□□□ -1.52
YKL111CYKL111C COQ8P27697 501 aa5.55□□□□□ -1.52
YKL111CYKL111C VNX1P42839 908 aa5.54□□□□□ -1.52
YKL111CYKL111C SET1P38827 1080 aaKnown RBP5.53□□□□□ -1.52
YKL111CYKL111C SAM3Q08986 587 aa5.53□□□□□ -1.52
YKL111CYKL111C SAS10Q12136 610 aaPredicted RBP5.51□□□□□ -1.53
YKL111CYKL111C NOP53Q12080 455 aaKnown RBP5.5□□□□□ -1.53
YKL111CYKL111C MIF2P35201 549 aa5.49□□□□□ -1.53
YKL111CYKL111C PTC3P34221 468 aaKnown RBP5.48□□□□□ -1.53
YKL111CYKL111C YPR148CQ06523 435 aa5.48□□□□□ -1.53
YKL111CYKL111C GTT3P39996 337 aa5.47□□□□□ -1.53
YKL111CYKL111C SPP1Q03012 353 aa5.47□□□□□ -1.53
YKL111CYKL111C YOL036WQ08206 761 aa5.46□□□□□ -1.54
YKL111CYKL111C WSC3Q12215 556 aa5.46□□□□□ -1.54
YKL111CYKL111C AIR2Q12476 344 aaKnown RBP5.43□□□□□ -1.54
YKL111CYKL111C SET4P42948 560 aa5.42□□□□□ -1.54
YKL111CYKL111C MSB4Q12317 492 aa5.42□□□□□ -1.54
YKL111CYKL111C GYP5Q12344 894 aa5.42□□□□□ -1.54
YKL111CYKL111C NST1P53935 1240 aa5.41□□□□□ -1.54
YKL111CYKL111C GRE2Q12068 342 aaKnown RBP5.41□□□□□ -1.54
YKL111CYKL111C GUT1P32190 709 aa5.4□□□□□ -1.54
YKL111CYKL111C SOL3P38858 249 aa5.4□□□□□ -1.54
YKL111CYKL111C IFH1P39520 1085 aa5.4□□□□□ -1.54
YKL111CYKL111C FKH1P40466 484 aa5.4□□□□□ -1.54
YKL111CYKL111C TIF11P38912 153 aaKnown RBP5.39□□□□□ -1.55
YKL111CYKL111C VPS70P47161 811 aa5.38□□□□□ -1.55
YKL111CYKL111C IOC2Q12072 812 aa5.38□□□□□ -1.55
YKL111CYKL111C ABP1P15891 592 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms