RNA–Protein interactions for RNA: YKL096W-A

CWP2, Transcript of Covalently linked cell wall mannoprotein, yeastyeast

Gene CWP2, Length 279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWP2YKL096W-A SGS1P35187 1447 aa14.32□□□□□ -0.12
CWP2YKL096W-A SPA2P23201 1466 aaKnown RBP13.98□□□□□ -0.17
CWP2YKL096W-A INO80P53115 1489 aa13.89□□□□□ -0.19
CWP2YKL096W-A SSN2P38931 1420 aa13.86□□□□□ -0.19
CWP2YKL096W-A TCB3Q03640 1545 aaKnown RBP13.59□□□□□ -0.23
CWP2YKL096W-A DRS1P32892 752 aaKnown RBP13.58□□□□□ -0.24
CWP2YKL096W-A TY1B-DR4Q07793 1604 aa13.36□□□□□ -0.27
CWP2YKL096W-A HSL1P34244 1518 aa13.23□□□□□ -0.29
CWP2YKL096W-A SPT6P23615 1451 aaKnown RBP13.21□□□□□ -0.3
CWP2YKL096W-A XRN1P22147 1528 aaKnown RBP13.03□□□□□ -0.32
CWP2YKL096W-A HIR3P47171 1648 aa13.03□□□□□ -0.32
CWP2YKL096W-A MON2P48563 1636 aaPredicted RBP12.94□□□□□ -0.34
CWP2YKL096W-A SWR1Q05471 1514 aa12.91□□□□□ -0.34
CWP2YKL096W-A THO2P53552 1597 aaKnown RBP12.88□□□□□ -0.35
CWP2YKL096W-A REV3P14284 1504 aa12.88□□□□□ -0.35
CWP2YKL096W-A SKI3P17883 1432 aaKnown RBP12.85□□□□□ -0.35
CWP2YKL096W-A TAF2P23255 1407 aa12.8□□□□□ -0.36
CWP2YKL096W-A SIN3P22579 1536 aa12.75□□□□□ -0.37
CWP2YKL096W-A SSK2P53599 1579 aa12.73□□□□□ -0.37
CWP2YKL096W-A MYO2P19524 1574 aaKnown RBP12.68□□□□□ -0.38
CWP2YKL096W-A MMS22Q06164 1454 aa12.67□□□□□ -0.38
CWP2YKL096W-A ESP1Q03018 1630 aa12.66□□□□□ -0.38
CWP2YKL096W-A CHD1P32657 1468 aa12.62□□□□□ -0.39
CWP2YKL096W-A SAS10Q12136 610 aaPredicted RBP12.51□□□□□ -0.41
CWP2YKL096W-A STU1P38198 1513 aa12.5□□□□□ -0.41
CWP2YKL096W-A POL1P13382 1468 aa12.46□□□□□ -0.42
CWP2YKL096W-A YTA7P40340 1379 aa12.43□□□□□ -0.42
CWP2YKL096W-A BUD4P47136 1447 aa12.43□□□□□ -0.42
CWP2YKL096W-A KOG1P38873 1557 aa12.42□□□□□ -0.42
CWP2YKL096W-A ATG2P53855 1592 aa12.4□□□□□ -0.42
CWP2YKL096W-A BPT1P14772 1559 aa12.39□□□□□ -0.43
CWP2YKL096W-A DNA2P38859 1522 aa12.37□□□□□ -0.43
CWP2YKL096W-A YPK9Q12697 1472 aa12.36□□□□□ -0.43
CWP2YKL096W-A RKR1Q04781 1562 aa12.35□□□□□ -0.43
CWP2YKL096W-A RSE1Q04693 1361 aaKnown RBP12.35□□□□□ -0.43
CWP2YKL096W-A ECM5Q03214 1411 aa12.33□□□□□ -0.44
CWP2YKL096W-A YOR1P53049 1477 aa12.27□□□□□ -0.45
CWP2YKL096W-A UFD4P33202 1483 aa12.26□□□□□ -0.45
CWP2YKL096W-A MYO4P32492 1471 aa12.23□□□□□ -0.45
CWP2YKL096W-A SCC2Q04002 1493 aa12.23□□□□□ -0.45
CWP2YKL096W-A TRM732Q03496 1420 aa12.23□□□□□ -0.45
CWP2YKL096W-A TAF7Q05021 590 aa12.21□□□□□ -0.45
CWP2YKL096W-A MDS3P53094 1487 aa12.18□□□□□ -0.46
CWP2YKL096W-A IKI3Q06706 1349 aaKnown RBP12.17□□□□□ -0.46
CWP2YKL096W-A PEP1P32319 1579 aa12.15□□□□□ -0.46
CWP2YKL096W-A SMC4Q12267 1418 aa12.14□□□□□ -0.47
CWP2YKL096W-A RPO31P04051 1460 aa12.14□□□□□ -0.47
CWP2YKL096W-A MLP2P40457 1679 aa12.13□□□□□ -0.47
CWP2YKL096W-A STH1P32597 1359 aa12.13□□□□□ -0.47
CWP2YKL096W-A TOP2P06786 1428 aaKnown RBP12.12□□□□□ -0.47
CWP2YKL096W-A IFH1P39520 1085 aa12.12□□□□□ -0.47
CWP2YKL096W-A SNQ2P32568 1501 aaKnown RBP12.11□□□□□ -0.47
CWP2YKL096W-A TY2B-LR1P0C2J3 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-FP0CX63 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-GR2P0CX64 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-CP25384 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-DR2Q03494 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY1B-DR1Q03855 1755 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-DR3Q07791 1770 aaKnown RBP12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-OR1Q12113 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-DR1Q12472 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A TY2B-OR2Q12501 1770 aa12.07□□□□□ -0.48
CWP2YKL096W-A YCF1P39109 1515 aaKnown RBP12.07□□□□□ -0.48
CWP2YKL096W-A TY1B-DR3Q99231 1755 aa12.07□□□□□ -0.48
CWP2YKL096W-A RQC2Q12532 1038 aaKnown RBP12.03□□□□□ -0.48
CWP2YKL096W-A SPP41P38904 1435 aa12.03□□□□□ -0.48
CWP2YKL096W-A PDR15Q04182 1529 aaKnown RBP12.01□□□□□ -0.49
CWP2YKL096W-A SSM4P40318 1319 aa11.99□□□□□ -0.49
CWP2YKL096W-A TY2B-BQ12491 1770 aa11.99□□□□□ -0.49
CWP2YKL096W-A GEA1P47102 1408 aaPredicted RBP11.95□□□□□ -0.5
CWP2YKL096W-A PAN1P32521 1480 aa11.95□□□□□ -0.5
CWP2YKL096W-A NUP170P38181 1502 aa11.92□□□□□ -0.5
CWP2YKL096W-A NSR1P27476 414 aaKnown RBP RIP-Chip data11.92□□□□□ -0.5not detected
CWP2YKL096W-A NOP2P40991 618 aaKnown RBP11.92□□□□□ -0.5
CWP2YKL096W-A ULS1Q08562 1619 aa11.9□□□□□ -0.5
CWP2YKL096W-A TY1B-HO13535 1793 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-DR5P0C2I2 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-DR6P0C2I3 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-LR2P0C2I5 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-LR3P0C2I6 1755 aaKnown RBP11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-PR1P0C2I9 1755 aaKnown RBP11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-PR2P0C2J0 1756 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-PR3P0C2J1 1755 aaKnown RBP11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-JR1P47098 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-ML2Q03434 1755 aaKnown RBP11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-ER1Q03612 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-ML1Q04711 1755 aaKnown RBP11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-GR2Q12269 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-OLQ12273 1755 aa11.87□□□□□ -0.51
CWP2YKL096W-A TY1B-PLQ12414 1755 aaKnown RBP11.87□□□□□ -0.51
CWP2YKL096W-A TSC11P40061 1430 aa11.86□□□□□ -0.51
CWP2YKL096W-A POL5P39985 1022 aaKnown RBP11.86□□□□□ -0.51
CWP2YKL096W-A TY1B-BRQ12193 1756 aa11.84□□□□□ -0.51
CWP2YKL096W-A TY1B-GR3Q12316 1755 aa11.84□□□□□ -0.51
CWP2YKL096W-A TY1B-ORQ92393 1755 aa11.84□□□□□ -0.51
CWP2YKL096W-A RTT106P40161 455 aa11.83□□□□□ -0.52
CWP2YKL096W-A VTH1P40438 1549 aa11.81□□□□□ -0.52
CWP2YKL096W-A VTH2P40890 1549 aa11.81□□□□□ -0.52
CWP2YKL096W-A MTC1P47018 478 aaKnown RBP11.75□□□□□ -0.53
CWP2YKL096W-A CDC25P04821 1589 aa11.73□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms