RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W MTC1P47018 478 aaKnown RBP15.64■□□□□ 0.09
PTM1YKL039W DRS1P32892 752 aaKnown RBP15.41■□□□□ 0.06
PTM1YKL039W BFR2Q06631 534 aaKnown RBP13.2□□□□□ -0.3
PTM1YKL039W DIP2Q12220 943 aaPredicted RBP13.2□□□□□ -0.3
PTM1YKL039W FAP1P53971 965 aa13.08□□□□□ -0.32
PTM1YKL039W AVT3P36062 692 aa12.98□□□□□ -0.33
PTM1YKL039W ISW2Q08773 1120 aa12.74□□□□□ -0.37
PTM1YKL039W PRI1P10363 409 aa12.7□□□□□ -0.38
PTM1YKL039W RPG1P38249 964 aaKnown RBP12.59□□□□□ -0.39
PTM1YKL039W RSE1Q04693 1361 aaKnown RBP12.54□□□□□ -0.4
PTM1YKL039W AAD16Q02895 342 aa12.51□□□□□ -0.41
PTM1YKL039W PRY3P47033 881 aa12.27□□□□□ -0.44
PTM1YKL039W TFA1P36100 482 aa12.26□□□□□ -0.45
PTM1YKL039W RPL17AP05740 184 aaKnown RBP12.09□□□□□ -0.47
PTM1YKL039W RPL17BP46990 184 aaKnown RBP12.09□□□□□ -0.47
PTM1YKL039W TSR3Q12094 313 aaKnown RBP12.05□□□□□ -0.48
PTM1YKL039W REB1P21538 810 aa11.94□□□□□ -0.5
PTM1YKL039W YCK3P39962 524 aa11.68□□□□□ -0.54
PTM1YKL039W SPT21P35209 758 aa11.67□□□□□ -0.54
PTM1YKL039W HAA1Q12753 694 aaKnown RBP11.56□□□□□ -0.56
PTM1YKL039W MRPL32P25348 183 aa11.54□□□□□ -0.56
PTM1YKL039W RIM101P33400 625 aa11.43□□□□□ -0.58
PTM1YKL039W YKR023WP36119 530 aaKnown RBP11.33□□□□□ -0.6
PTM1YKL039W CDC27P38042 758 aa11.17□□□□□ -0.62
PTM1YKL039W TFC8Q12308 588 aa11.1□□□□□ -0.63
PTM1YKL039W HOP09932 586 aa11.08□□□□□ -0.64
PTM1YKL039W OXP1P28273 1286 aa11.07□□□□□ -0.64
PTM1YKL039W DCD1P06773 312 aa11.02□□□□□ -0.65
PTM1YKL039W YIL055CP40523 627 aaKnown RBP10.86□□□□□ -0.67
PTM1YKL039W YAH1Q12184 172 aaKnown RBP10.84□□□□□ -0.67
PTM1YKL039W YGL015CP33199 130 aa10.83□□□□□ -0.68
PTM1YKL039W PTP3P40048 928 aa10.83□□□□□ -0.68
PTM1YKL039W SSP1P38871 571 aa10.78□□□□□ -0.68
PTM1YKL039W BCH2P36122 765 aa10.76□□□□□ -0.69
PTM1YKL039W UBP10P53874 792 aaPredicted RBP10.73□□□□□ -0.69
PTM1YKL039W RSM7P47150 247 aa10.73□□□□□ -0.69
PTM1YKL039W MAP2P38174 421 aaKnown RBP10.71□□□□□ -0.69
PTM1YKL039W YLR271WQ06152 274 aa10.71□□□□□ -0.69
PTM1YKL039W SCY1P53009 804 aa10.64□□□□□ -0.71
PTM1YKL039W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
PTM1YKL039W EPS1P40557 701 aa10.56□□□□□ -0.72
PTM1YKL039W AI2P03876 854 aa10.56□□□□□ -0.72
PTM1YKL039W BBC1P47068 1157 aa10.49□□□□□ -0.73
PTM1YKL039W BDF1P35817 686 aa10.48□□□□□ -0.73
PTM1YKL039W PSD2P53037 1138 aaKnown RBP10.48□□□□□ -0.73
PTM1YKL039W SLX5P32828 619 aaKnown RBP10.45□□□□□ -0.74
PTM1YKL039W MGA2P40578 1113 aa10.43□□□□□ -0.74
PTM1YKL039W CST9Q06032 482 aa10.39□□□□□ -0.75
PTM1YKL039W TIF4632P39936 914 aaKnown RBP10.25□□□□□ -0.77
PTM1YKL039W MRM1P25270 412 aa10.22□□□□□ -0.77
PTM1YKL039W TGL3P40308 642 aa10.19□□□□□ -0.78
PTM1YKL039W RCR1P38212 213 aa10.06□□□□□ -0.8
PTM1YKL039W NSR1P27476 414 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
PTM1YKL039W RTG3P38165 486 aa10.05□□□□□ -0.8
PTM1YKL039W RQC2Q12532 1038 aaKnown RBP10.01□□□□□ -0.81
PTM1YKL039W VPS29P38759 282 aa10□□□□□ -0.81
PTM1YKL039W RAM2P29703 316 aa9.97□□□□□ -0.81
PTM1YKL039W DMA1P38823 416 aa9.97□□□□□ -0.81
PTM1YKL039W YAP5P40574 245 aa9.95□□□□□ -0.82
PTM1YKL039W YMR1P47147 688 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
PTM1YKL039W YOR238WQ08634 303 aa9.9□□□□□ -0.82
PTM1YKL039W MST1P07236 462 aa9.89□□□□□ -0.83
PTM1YKL039W STS1P38637 319 aa9.88□□□□□ -0.83
PTM1YKL039W DBP1P24784 617 aaKnown RBP9.85□□□□□ -0.83
PTM1YKL039W YFR006WP43590 535 aa9.84□□□□□ -0.83
PTM1YKL039W PIB1Q06651 286 aa9.84□□□□□ -0.83
PTM1YKL039W MAK11P20484 414 aaKnown RBP9.83□□□□□ -0.84
PTM1YKL039W VMA1P17255 1071 aaKnown RBP9.7□□□□□ -0.86
PTM1YKL039W COQ8P27697 501 aa9.69□□□□□ -0.86
PTM1YKL039W GTT3P39996 337 aa9.69□□□□□ -0.86
PTM1YKL039W EDS1P38073 919 aa9.67□□□□□ -0.86
PTM1YKL039W MIF2P35201 549 aa9.66□□□□□ -0.86
PTM1YKL039W SET1P38827 1080 aaKnown RBP9.66□□□□□ -0.86
PTM1YKL039W SAM3Q08986 587 aa9.63□□□□□ -0.87
PTM1YKL039W UBP9P39967 754 aa9.61□□□□□ -0.87
PTM1YKL039W BUD31P25337 157 aaPredicted RBP9.59□□□□□ -0.87
PTM1YKL039W YBL029C-AQ3E756 94 aa9.59□□□□□ -0.87
PTM1YKL039W PTC3P34221 468 aaKnown RBP9.58□□□□□ -0.88
PTM1YKL039W NOP53Q12080 455 aaKnown RBP9.58□□□□□ -0.88
PTM1YKL039W WSC3Q12215 556 aa9.58□□□□□ -0.88
PTM1YKL039W YOL036WQ08206 761 aa9.56□□□□□ -0.88
PTM1YKL039W SAS10Q12136 610 aaPredicted RBP9.55□□□□□ -0.88
PTM1YKL039W VNX1P42839 908 aa9.53□□□□□ -0.88
PTM1YKL039W YPR148CQ06523 435 aa9.52□□□□□ -0.89
PTM1YKL039W SET4P42948 560 aa9.51□□□□□ -0.89
PTM1YKL039W MSB4Q12317 492 aa9.51□□□□□ -0.89
PTM1YKL039W GYP5Q12344 894 aa9.5□□□□□ -0.89
PTM1YKL039W IFH1P39520 1085 aa9.49□□□□□ -0.89
PTM1YKL039W GRE2Q12068 342 aaKnown RBP9.49□□□□□ -0.89
PTM1YKL039W ATH1P48016 1211 aa9.46□□□□□ -0.9
PTM1YKL039W ABP1P15891 592 aaKnown RBP9.44□□□□□ -0.9
PTM1YKL039W GUT1P32190 709 aa9.44□□□□□ -0.9
PTM1YKL039W TIF11P38912 153 aaKnown RBP9.43□□□□□ -0.9
PTM1YKL039W SPP1Q03012 353 aa9.43□□□□□ -0.9
PTM1YKL039W VPS70P47161 811 aa9.42□□□□□ -0.9
PTM1YKL039W DCW1P36091 449 aa9.41□□□□□ -0.9
PTM1YKL039W EAP1P36041 632 aaKnown RBP9.4□□□□□ -0.9
PTM1YKL039W HTA1P04911 132 aaKnown RBP9.37□□□□□ -0.91
PTM1YKL039W HTA2P04912 132 aa9.37□□□□□ -0.91
PTM1YKL039W ULI1P43604 169 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms