RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C MTC1P47018 478 aaKnown RBP12.86□□□□□ -0.35
ATG27YJL178C FAP1P53971 965 aa12.42□□□□□ -0.42
ATG27YJL178C DRS1P32892 752 aaKnown RBP12.35□□□□□ -0.43
ATG27YJL178C PRY3P47033 881 aa11.75□□□□□ -0.53
ATG27YJL178C AAD16Q02895 342 aa11.19□□□□□ -0.62
ATG27YJL178C YCK3P39962 524 aa11.15□□□□□ -0.62
ATG27YJL178C PRI1P10363 409 aa11.14□□□□□ -0.63
ATG27YJL178C HAA1Q12753 694 aaKnown RBP10.96□□□□□ -0.65
ATG27YJL178C DIP2Q12220 943 aaPredicted RBP10.71□□□□□ -0.69
ATG27YJL178C ISW2Q08773 1120 aa10.53□□□□□ -0.72
ATG27YJL178C RPG1P38249 964 aaKnown RBP10.48□□□□□ -0.73
ATG27YJL178C AVT3P36062 692 aa10.46□□□□□ -0.73
ATG27YJL178C TSR3Q12094 313 aaKnown RBP10.45□□□□□ -0.74
ATG27YJL178C BFR2Q06631 534 aaKnown RBP10.43□□□□□ -0.74
ATG27YJL178C RSE1Q04693 1361 aaKnown RBP10.22□□□□□ -0.77
ATG27YJL178C MRPL32P25348 183 aa10.02□□□□□ -0.81
ATG27YJL178C YGL015CP33199 130 aa9.94□□□□□ -0.82
ATG27YJL178C RPL17AP05740 184 aaKnown RBP9.89□□□□□ -0.83
ATG27YJL178C RPL17BP46990 184 aaKnown RBP9.89□□□□□ -0.83
ATG27YJL178C REB1P21538 810 aa9.78□□□□□ -0.84
ATG27YJL178C BUD31P25337 157 aaPredicted RBP9.63□□□□□ -0.87
ATG27YJL178C SPT21P35209 758 aa9.54□□□□□ -0.88
ATG27YJL178C TFA1P36100 482 aa9.49□□□□□ -0.89
ATG27YJL178C CDC27P38042 758 aa9.37□□□□□ -0.91
ATG27YJL178C YKR023WP36119 530 aaKnown RBP9.35□□□□□ -0.91
ATG27YJL178C RIM101P33400 625 aa9.29□□□□□ -0.92
ATG27YJL178C UBP10P53874 792 aaPredicted RBP9.23□□□□□ -0.93
ATG27YJL178C MAP2P38174 421 aaKnown RBP9.19□□□□□ -0.94
ATG27YJL178C HOP09932 586 aa9.15□□□□□ -0.94
ATG27YJL178C TFC8Q12308 588 aa9.15□□□□□ -0.94
ATG27YJL178C DCD1P06773 312 aa9.1□□□□□ -0.95
ATG27YJL178C SIS1P25294 352 aaKnown RBP9.02□□□□□ -0.97
ATG27YJL178C OXP1P28273 1286 aa9.01□□□□□ -0.97
ATG27YJL178C BCH2P36122 765 aa8.87□□□□□ -0.99
ATG27YJL178C UBP9P39967 754 aa8.87□□□□□ -0.99
ATG27YJL178C TGL3P40308 642 aa8.84□□□□□ -0.99
ATG27YJL178C TIF4632P39936 914 aaKnown RBP8.82□□□□□ -1
ATG27YJL178C SCY1P53009 804 aa8.8□□□□□ -1
ATG27YJL178C YIL055CP40523 627 aaKnown RBP8.78□□□□□ -1
ATG27YJL178C PTP3P40048 928 aa8.76□□□□□ -1.01
ATG27YJL178C SLX5P32828 619 aaKnown RBP8.74□□□□□ -1.01
ATG27YJL178C YAH1Q12184 172 aaKnown RBP8.74□□□□□ -1.01
ATG27YJL178C RSM7P47150 247 aa8.69□□□□□ -1.02
ATG27YJL178C EPS1P40557 701 aa8.66□□□□□ -1.02
ATG27YJL178C YLR271WQ06152 274 aa8.65□□□□□ -1.02
ATG27YJL178C BDF1P35817 686 aa8.62□□□□□ -1.03
ATG27YJL178C SSP1P38871 571 aa8.6□□□□□ -1.03
ATG27YJL178C AI2P03876 854 aa8.58□□□□□ -1.04
ATG27YJL178C BBC1P47068 1157 aa8.52□□□□□ -1.05
ATG27YJL178C PSD2P53037 1138 aaKnown RBP8.48□□□□□ -1.05
ATG27YJL178C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
ATG27YJL178C YBL029C-AQ3E756 94 aa8.38□□□□□ -1.07
ATG27YJL178C MST1P07236 462 aa8.37□□□□□ -1.07
ATG27YJL178C CST9Q06032 482 aa8.37□□□□□ -1.07
ATG27YJL178C MGA2P40578 1113 aa8.35□□□□□ -1.07
ATG27YJL178C MRM1P25270 412 aa8.3□□□□□ -1.08
ATG27YJL178C NSR1P27476 414 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
ATG27YJL178C VNX1P42839 908 aa8.25□□□□□ -1.09
ATG27YJL178C YOR238WQ08634 303 aa8.23□□□□□ -1.09
ATG27YJL178C YAP5P40574 245 aa8.18□□□□□ -1.1
ATG27YJL178C RCR1P38212 213 aa8.15□□□□□ -1.1
ATG27YJL178C VPS29P38759 282 aa8.14□□□□□ -1.11
ATG27YJL178C SPP1Q03012 353 aa8.14□□□□□ -1.11
ATG27YJL178C AIR2Q12476 344 aaKnown RBP8.14□□□□□ -1.11
ATG27YJL178C RTG3P38165 486 aa8.12□□□□□ -1.11
ATG27YJL178C FKH1P40466 484 aa8.08□□□□□ -1.12
ATG27YJL178C PIB1Q06651 286 aa8.07□□□□□ -1.12
ATG27YJL178C WSC3Q12215 556 aa8.06□□□□□ -1.12
ATG27YJL178C YJL171CP46992 396 aa8.05□□□□□ -1.12
ATG27YJL178C YMR1P47147 688 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
ATG27YJL178C STS1P38637 319 aa8.04□□□□□ -1.12
ATG27YJL178C DBP1P24784 617 aaKnown RBP8.03□□□□□ -1.12
ATG27YJL178C YFR006WP43590 535 aa8.01□□□□□ -1.13
ATG27YJL178C TIF11P38912 153 aaKnown RBP8□□□□□ -1.13
ATG27YJL178C RAM2P29703 316 aa7.99□□□□□ -1.13
ATG27YJL178C GTT3P39996 337 aa7.95□□□□□ -1.14
ATG27YJL178C VMA1P17255 1071 aaKnown RBP7.91□□□□□ -1.14
ATG27YJL178C LDB19Q12502 818 aa7.89□□□□□ -1.15
ATG27YJL178C MAK11P20484 414 aaKnown RBP7.88□□□□□ -1.15
ATG27YJL178C SAM3Q08986 587 aa7.87□□□□□ -1.15
ATG27YJL178C BMT6Q12291 365 aa7.87□□□□□ -1.15
ATG27YJL178C IOC2Q12072 812 aa7.85□□□□□ -1.15
ATG27YJL178C YOL036WQ08206 761 aa7.83□□□□□ -1.16
ATG27YJL178C SET4P42948 560 aa7.82□□□□□ -1.16
ATG27YJL178C ULI1P43604 169 aa7.82□□□□□ -1.16
ATG27YJL178C EDS1P38073 919 aa7.81□□□□□ -1.16
ATG27YJL178C MSB4Q12317 492 aa7.8□□□□□ -1.16
ATG27YJL178C COQ8P27697 501 aa7.78□□□□□ -1.16
ATG27YJL178C MIF2P35201 549 aa7.78□□□□□ -1.16
ATG27YJL178C GYP5Q12344 894 aa7.74□□□□□ -1.17
ATG27YJL178C PTC3P34221 468 aaKnown RBP7.73□□□□□ -1.17
ATG27YJL178C EAP1P36041 632 aaKnown RBP7.73□□□□□ -1.17
ATG27YJL178C TRP5P00931 707 aaKnown RBP7.72□□□□□ -1.17
ATG27YJL178C DMA1P38823 416 aa7.69□□□□□ -1.18
ATG27YJL178C DCW1P36091 449 aa7.68□□□□□ -1.18
ATG27YJL178C GRE2Q12068 342 aaKnown RBP7.68□□□□□ -1.18
ATG27YJL178C RQC2Q12532 1038 aaKnown RBP7.67□□□□□ -1.18
ATG27YJL178C ABP1P15891 592 aaKnown RBP7.66□□□□□ -1.18
ATG27YJL178C SET1P38827 1080 aaKnown RBP7.66□□□□□ -1.18
ATG27YJL178C NOP53Q12080 455 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms