RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C MTC1P47018 478 aaKnown RBP14.28□□□□□ -0.12
RFA3YJL173C DRS1P32892 752 aaKnown RBP14.07□□□□□ -0.16
RFA3YJL173C FAP1P53971 965 aa12.14□□□□□ -0.47
RFA3YJL173C DIP2Q12220 943 aaPredicted RBP12.08□□□□□ -0.48
RFA3YJL173C BFR2Q06631 534 aaKnown RBP12.05□□□□□ -0.48
RFA3YJL173C AVT3P36062 692 aa11.79□□□□□ -0.52
RFA3YJL173C ISW2Q08773 1120 aa11.73□□□□□ -0.53
RFA3YJL173C PRI1P10363 409 aa11.63□□□□□ -0.55
RFA3YJL173C RPG1P38249 964 aaKnown RBP11.55□□□□□ -0.56
RFA3YJL173C AAD16Q02895 342 aa11.5□□□□□ -0.57
RFA3YJL173C RSE1Q04693 1361 aaKnown RBP11.49□□□□□ -0.57
RFA3YJL173C PRY3P47033 881 aa11.35□□□□□ -0.59
RFA3YJL173C RPL17AP05740 184 aaKnown RBP11.07□□□□□ -0.64
RFA3YJL173C TFA1P36100 482 aa11.07□□□□□ -0.64
RFA3YJL173C RPL17BP46990 184 aaKnown RBP11.07□□□□□ -0.64
RFA3YJL173C TSR3Q12094 313 aaKnown RBP11.05□□□□□ -0.64
RFA3YJL173C REB1P21538 810 aa11□□□□□ -0.65
RFA3YJL173C HAA1Q12753 694 aaKnown RBP10.67□□□□□ -0.7
RFA3YJL173C MRPL32P25348 183 aa10.66□□□□□ -0.7
RFA3YJL173C YCK3P39962 524 aa10.6□□□□□ -0.71
RFA3YJL173C SPT21P35209 758 aa10.58□□□□□ -0.72
RFA3YJL173C RIM101P33400 625 aa10.38□□□□□ -0.75
RFA3YJL173C YKR023WP36119 530 aaKnown RBP10.31□□□□□ -0.76
RFA3YJL173C CDC27P38042 758 aa10.17□□□□□ -0.78
RFA3YJL173C HOP09932 586 aa10.14□□□□□ -0.79
RFA3YJL173C TFC8Q12308 588 aa10.12□□□□□ -0.79
RFA3YJL173C DCD1P06773 312 aa10.07□□□□□ -0.8
RFA3YJL173C OXP1P28273 1286 aa10.04□□□□□ -0.8
RFA3YJL173C YGL015CP33199 130 aa10.01□□□□□ -0.81
RFA3YJL173C YIL055CP40523 627 aaKnown RBP10□□□□□ -0.81
RFA3YJL173C PTP3P40048 928 aa9.96□□□□□ -0.82
RFA3YJL173C YAH1Q12184 172 aaKnown RBP9.93□□□□□ -0.82
RFA3YJL173C UBP10P53874 792 aaPredicted RBP9.84□□□□□ -0.83
RFA3YJL173C BCH2P36122 765 aa9.82□□□□□ -0.84
RFA3YJL173C SSP1P38871 571 aa9.82□□□□□ -0.84
RFA3YJL173C MAP2P38174 421 aaKnown RBP9.8□□□□□ -0.84
RFA3YJL173C RSM7P47150 247 aa9.79□□□□□ -0.84
RFA3YJL173C SCY1P53009 804 aa9.76□□□□□ -0.85
RFA3YJL173C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
RFA3YJL173C YLR271WQ06152 274 aa9.73□□□□□ -0.85
RFA3YJL173C BBC1P47068 1157 aa9.66□□□□□ -0.86
RFA3YJL173C AI2P03876 854 aa9.65□□□□□ -0.86
RFA3YJL173C EPS1P40557 701 aa9.65□□□□□ -0.86
RFA3YJL173C SLX5P32828 619 aaKnown RBP9.6□□□□□ -0.87
RFA3YJL173C BDF1P35817 686 aa9.57□□□□□ -0.88
RFA3YJL173C MGA2P40578 1113 aa9.51□□□□□ -0.89
RFA3YJL173C PSD2P53037 1138 aaKnown RBP9.5□□□□□ -0.89
RFA3YJL173C TIF4632P39936 914 aaKnown RBP9.48□□□□□ -0.89
RFA3YJL173C CST9Q06032 482 aa9.43□□□□□ -0.9
RFA3YJL173C TGL3P40308 642 aa9.37□□□□□ -0.91
RFA3YJL173C MRM1P25270 412 aa9.35□□□□□ -0.91
RFA3YJL173C RTG3P38165 486 aa9.2□□□□□ -0.94
RFA3YJL173C RQC2Q12532 1038 aaKnown RBP9.16□□□□□ -0.94
RFA3YJL173C NSR1P27476 414 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94 RIP-Chip
RFA3YJL173C YAP5P40574 245 aa9.14□□□□□ -0.95
RFA3YJL173C RCR1P38212 213 aa9.13□□□□□ -0.95
RFA3YJL173C YOR238WQ08634 303 aa9.1□□□□□ -0.95
RFA3YJL173C VPS29P38759 282 aa9.07□□□□□ -0.96
RFA3YJL173C YMR1P47147 688 aaKnown RBP RIP-Chip data9.07□□□□□ -0.96not detected
RFA3YJL173C RAM2P29703 316 aa9.03□□□□□ -0.96
RFA3YJL173C DMA1P38823 416 aa9.03□□□□□ -0.96
RFA3YJL173C MST1P07236 462 aa9.01□□□□□ -0.97
RFA3YJL173C DBP1P24784 617 aaKnown RBP9.01□□□□□ -0.97
RFA3YJL173C PIB1Q06651 286 aa9.01□□□□□ -0.97
RFA3YJL173C YFR006WP43590 535 aa8.99□□□□□ -0.97
RFA3YJL173C STS1P38637 319 aa8.97□□□□□ -0.97
RFA3YJL173C MAK11P20484 414 aaKnown RBP8.96□□□□□ -0.98
RFA3YJL173C GTT3P39996 337 aa8.95□□□□□ -0.98
RFA3YJL173C UBP9P39967 754 aa8.92□□□□□ -0.98
RFA3YJL173C VMA1P17255 1071 aaKnown RBP8.86□□□□□ -0.99
RFA3YJL173C MIF2P35201 549 aa8.86□□□□□ -0.99
RFA3YJL173C BUD31P25337 157 aaPredicted RBP8.82□□□□□ -1
RFA3YJL173C COQ8P27697 501 aa8.82□□□□□ -1
RFA3YJL173C WSC3Q12215 556 aa8.82□□□□□ -1
RFA3YJL173C YBL029C-AQ3E756 94 aa8.82□□□□□ -1
RFA3YJL173C SET1P38827 1080 aaKnown RBP8.81□□□□□ -1
RFA3YJL173C EDS1P38073 919 aa8.75□□□□□ -1.01
RFA3YJL173C VNX1P42839 908 aa8.74□□□□□ -1.01
RFA3YJL173C SAM3Q08986 587 aa8.74□□□□□ -1.01
RFA3YJL173C SET4P42948 560 aa8.73□□□□□ -1.01
RFA3YJL173C YOL036WQ08206 761 aa8.73□□□□□ -1.01
RFA3YJL173C PTC3P34221 468 aaKnown RBP8.72□□□□□ -1.01
RFA3YJL173C NOP53Q12080 455 aaKnown RBP8.72□□□□□ -1.01
RFA3YJL173C MSB4Q12317 492 aa8.72□□□□□ -1.01
RFA3YJL173C SPP1Q03012 353 aa8.71□□□□□ -1.02
RFA3YJL173C GRE2Q12068 342 aaKnown RBP8.7□□□□□ -1.02
RFA3YJL173C GYP5Q12344 894 aa8.7□□□□□ -1.02
RFA3YJL173C IFH1P39520 1085 aa8.68□□□□□ -1.02
RFA3YJL173C ATH1P48016 1211 aa8.68□□□□□ -1.02
RFA3YJL173C ABP1P15891 592 aaKnown RBP8.66□□□□□ -1.02
RFA3YJL173C EAP1P36041 632 aaKnown RBP8.66□□□□□ -1.02
RFA3YJL173C TIF11P38912 153 aaKnown RBP8.66□□□□□ -1.02
RFA3YJL173C GUT1P32190 709 aa8.63□□□□□ -1.03
RFA3YJL173C DCW1P36091 449 aa8.62□□□□□ -1.03
RFA3YJL173C ULI1P43604 169 aa8.62□□□□□ -1.03
RFA3YJL173C HTA1P04911 132 aaKnown RBP8.61□□□□□ -1.03
RFA3YJL173C HTA2P04912 132 aa8.61□□□□□ -1.03
RFA3YJL173C SAS10Q12136 610 aaPredicted RBP8.6□□□□□ -1.03
RFA3YJL173C YPR148CQ06523 435 aa8.59□□□□□ -1.03
RFA3YJL173C TRP5P00931 707 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms