RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W DRS1P32892 752 aaKnown RBP12.37□□□□□ -0.43
LCB3YJL134W MON2P48563 1636 aaPredicted RBP11.76□□□□□ -0.53
LCB3YJL134W INO80P53115 1489 aa11.74□□□□□ -0.53
LCB3YJL134W MTC1P47018 478 aaKnown RBP11.66□□□□□ -0.54
LCB3YJL134W SGS1P35187 1447 aa11.17□□□□□ -0.62
LCB3YJL134W TCB3Q03640 1545 aaKnown RBP11.16□□□□□ -0.62
LCB3YJL134W DNA2P38859 1522 aa11.14□□□□□ -0.63
LCB3YJL134W SWR1Q05471 1514 aa11.14□□□□□ -0.63
LCB3YJL134W KOG1P38873 1557 aa11.07□□□□□ -0.64
LCB3YJL134W TY1B-DR4Q07793 1604 aa11.03□□□□□ -0.64
LCB3YJL134W BFR2Q06631 534 aaKnown RBP11□□□□□ -0.65
LCB3YJL134W TFA1P36100 482 aa10.82□□□□□ -0.68
LCB3YJL134W RSE1Q04693 1361 aaKnown RBP10.78□□□□□ -0.68
LCB3YJL134W SPA2P23201 1466 aaKnown RBP10.74□□□□□ -0.69
LCB3YJL134W SSN2P38931 1420 aa10.67□□□□□ -0.7
LCB3YJL134W SPT6P23615 1451 aaKnown RBP10.64□□□□□ -0.71
LCB3YJL134W HSL1P34244 1518 aa10.63□□□□□ -0.71
LCB3YJL134W ECM5Q03214 1411 aa10.43□□□□□ -0.74
LCB3YJL134W THO2P53552 1597 aaKnown RBP10.4□□□□□ -0.74
LCB3YJL134W HIR3P47171 1648 aa10.39□□□□□ -0.75
LCB3YJL134W BUD4P47136 1447 aa10.39□□□□□ -0.75
LCB3YJL134W AVT3P36062 692 aa10.35□□□□□ -0.75
LCB3YJL134W DIP2Q12220 943 aaPredicted RBP10.32□□□□□ -0.76
LCB3YJL134W MDS3P53094 1487 aa10.25□□□□□ -0.77
LCB3YJL134W XRN1P22147 1528 aaKnown RBP10.25□□□□□ -0.77
LCB3YJL134W PEP1P32319 1579 aa10.15□□□□□ -0.78
LCB3YJL134W REV3P14284 1504 aa10.14□□□□□ -0.79
LCB3YJL134W SIN3P22579 1536 aa10.07□□□□□ -0.8
LCB3YJL134W ATG2P53855 1592 aa10.05□□□□□ -0.8
LCB3YJL134W SSK2P53599 1579 aa10.01□□□□□ -0.81
LCB3YJL134W BPT1P14772 1559 aa9.99□□□□□ -0.81
LCB3YJL134W RQC2Q12532 1038 aaKnown RBP9.97□□□□□ -0.81
LCB3YJL134W TAF2P23255 1407 aa9.97□□□□□ -0.81
LCB3YJL134W ESP1Q03018 1630 aa9.91□□□□□ -0.82
LCB3YJL134W MYO2P19524 1574 aaKnown RBP9.91□□□□□ -0.82
LCB3YJL134W SKI3P17883 1432 aaKnown RBP9.86□□□□□ -0.83
LCB3YJL134W YCF1P39109 1515 aaKnown RBP9.83□□□□□ -0.84
LCB3YJL134W YPK9Q12697 1472 aa9.77□□□□□ -0.85
LCB3YJL134W UFD4P33202 1483 aa9.72□□□□□ -0.85
LCB3YJL134W POL1P13382 1468 aa9.72□□□□□ -0.85
LCB3YJL134W SCC2Q04002 1493 aa9.67□□□□□ -0.86
LCB3YJL134W MET5P47169 1442 aa9.67□□□□□ -0.86
LCB3YJL134W STU1P38198 1513 aa9.66□□□□□ -0.86
LCB3YJL134W RPO31P04051 1460 aa9.66□□□□□ -0.86
LCB3YJL134W RKR1Q04781 1562 aa9.63□□□□□ -0.87
LCB3YJL134W CHD1P32657 1468 aa9.62□□□□□ -0.87
LCB3YJL134W MMS22Q06164 1454 aa9.6□□□□□ -0.87
LCB3YJL134W YTA7P40340 1379 aa9.58□□□□□ -0.88
LCB3YJL134W YOR1P53049 1477 aa9.58□□□□□ -0.88
LCB3YJL134W CDC25P04821 1589 aa9.58□□□□□ -0.88
LCB3YJL134W LTE1P07866 1435 aa9.56□□□□□ -0.88
LCB3YJL134W TOP2P06786 1428 aaKnown RBP9.56□□□□□ -0.88
LCB3YJL134W PAN1P32521 1480 aa9.53□□□□□ -0.88
LCB3YJL134W SMC4Q12267 1418 aa9.52□□□□□ -0.89
LCB3YJL134W MYO4P32492 1471 aa9.52□□□□□ -0.89
LCB3YJL134W MIF2P35201 549 aa9.51□□□□□ -0.89
LCB3YJL134W DNF1P32660 1571 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-LR1P0C2J3 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-FP0CX63 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-GR2P0CX64 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-CP25384 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-DR2Q03494 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY1B-DR1Q03855 1755 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-DR3Q07791 1770 aaKnown RBP9.5□□□□□ -0.89
LCB3YJL134W TY2B-OR1Q12113 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-DR1Q12472 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY2B-OR2Q12501 1770 aa9.5□□□□□ -0.89
LCB3YJL134W TY1B-DR3Q99231 1755 aa9.45□□□□□ -0.9
LCB3YJL134W ESC1Q03661 1658 aaKnown RBP9.45□□□□□ -0.9
LCB3YJL134W TY1B-BRQ12193 1756 aa9.42□□□□□ -0.9
LCB3YJL134W TY1B-GR3Q12316 1755 aa9.42□□□□□ -0.9
LCB3YJL134W TY1B-ORQ92393 1755 aa9.42□□□□□ -0.9
LCB3YJL134W TY2B-BQ12491 1770 aa9.42□□□□□ -0.9
LCB3YJL134W GEA2P39993 1459 aaKnown RBP9.41□□□□□ -0.9
LCB3YJL134W RPA190P10964 1664 aaKnown RBP9.41□□□□□ -0.9
LCB3YJL134W SAS10Q12136 610 aaPredicted RBP9.4□□□□□ -0.9
LCB3YJL134W ISW2Q08773 1120 aa9.37□□□□□ -0.91
LCB3YJL134W TRM732Q03496 1420 aa9.37□□□□□ -0.91
LCB3YJL134W SNQ2P32568 1501 aaKnown RBP9.36□□□□□ -0.91
LCB3YJL134W SPP41P38904 1435 aa9.35□□□□□ -0.91
LCB3YJL134W BNI1P41832 1953 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-HO13535 1793 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-DR5P0C2I2 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-DR6P0C2I3 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-LR2P0C2I5 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-LR3P0C2I6 1755 aaKnown RBP9.35□□□□□ -0.91
LCB3YJL134W TY1B-PR1P0C2I9 1755 aaKnown RBP9.35□□□□□ -0.91
LCB3YJL134W TY1B-PR2P0C2J0 1756 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-PR3P0C2J1 1755 aaKnown RBP9.35□□□□□ -0.91
LCB3YJL134W TY1B-JR1P47098 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-ML2Q03434 1755 aaKnown RBP9.35□□□□□ -0.91
LCB3YJL134W TY1B-ER1Q03612 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-ML1Q04711 1755 aaKnown RBP9.35□□□□□ -0.91
LCB3YJL134W TY1B-GR2Q12269 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-OLQ12273 1755 aa9.35□□□□□ -0.91
LCB3YJL134W TY1B-PLQ12414 1755 aaKnown RBP9.35□□□□□ -0.91
LCB3YJL134W STH1P32597 1359 aa9.32□□□□□ -0.92
LCB3YJL134W ITT1Q04638 464 aa9.31□□□□□ -0.92
LCB3YJL134W MLP2P40457 1679 aa9.31□□□□□ -0.92
LCB3YJL134W FAP1P53971 965 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms