RNA–Protein interactions for RNA: YHR129C

ARP1, Transcript of Actin-related protein of the dynactin complex, yeastyeast

Gene ARP1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP1YHR129C MTC1P47018 478 aaKnown RBP13.38□□□□□ -0.27
ARP1YHR129C FAP1P53971 965 aa12.36□□□□□ -0.43
ARP1YHR129C DRS1P32892 752 aaKnown RBP12.32□□□□□ -0.44
ARP1YHR129C PRY3P47033 881 aa11.69□□□□□ -0.54
ARP1YHR129C PRI1P10363 409 aa11.37□□□□□ -0.59
ARP1YHR129C AAD16Q02895 342 aa11.33□□□□□ -0.6
ARP1YHR129C ISW2Q08773 1120 aa11.14□□□□□ -0.63
ARP1YHR129C YCK3P39962 524 aa11.11□□□□□ -0.63
ARP1YHR129C RPG1P38249 964 aaKnown RBP11.01□□□□□ -0.65
ARP1YHR129C HAA1Q12753 694 aaKnown RBP10.88□□□□□ -0.67
ARP1YHR129C DIP2Q12220 943 aaPredicted RBP10.86□□□□□ -0.67
ARP1YHR129C BFR2Q06631 534 aaKnown RBP10.82□□□□□ -0.68
ARP1YHR129C TSR3Q12094 313 aaKnown RBP10.72□□□□□ -0.69
ARP1YHR129C TFA1P36100 482 aa10.67□□□□□ -0.7
ARP1YHR129C RSE1Q04693 1361 aaKnown RBP10.56□□□□□ -0.72
ARP1YHR129C AVT3P36062 692 aa10.42□□□□□ -0.74
ARP1YHR129C MRPL32P25348 183 aa10.34□□□□□ -0.75
ARP1YHR129C RPL17AP05740 184 aaKnown RBP10.23□□□□□ -0.77
ARP1YHR129C RPL17BP46990 184 aaKnown RBP10.23□□□□□ -0.77
ARP1YHR129C REB1P21538 810 aa10.21□□□□□ -0.77
ARP1YHR129C RQC2Q12532 1038 aaKnown RBP10.1□□□□□ -0.79
ARP1YHR129C YGL015CP33199 130 aa9.97□□□□□ -0.81
ARP1YHR129C TAF7Q05021 590 aa9.86□□□□□ -0.83
ARP1YHR129C SPT21P35209 758 aa9.76□□□□□ -0.85
ARP1YHR129C CDC27P38042 758 aa9.75□□□□□ -0.85
ARP1YHR129C YKR023WP36119 530 aaKnown RBP9.69□□□□□ -0.86
ARP1YHR129C BUD31P25337 157 aaPredicted RBP9.59□□□□□ -0.87
ARP1YHR129C UBP10P53874 792 aaPredicted RBP9.55□□□□□ -0.88
ARP1YHR129C TFC8Q12308 588 aa9.51□□□□□ -0.89
ARP1YHR129C HOP09932 586 aa9.49□□□□□ -0.89
ARP1YHR129C MAP2P38174 421 aaKnown RBP9.48□□□□□ -0.89
ARP1YHR129C DCD1P06773 312 aa9.43□□□□□ -0.9
ARP1YHR129C RIM101P33400 625 aa9.41□□□□□ -0.9
ARP1YHR129C SCY1P53009 804 aa9.26□□□□□ -0.93
ARP1YHR129C SLX5P32828 619 aaKnown RBP9.18□□□□□ -0.94
ARP1YHR129C BCH2P36122 765 aa9.18□□□□□ -0.94
ARP1YHR129C TIF4632P39936 914 aaKnown RBP9.17□□□□□ -0.94
ARP1YHR129C TGL3P40308 642 aa9.12□□□□□ -0.95
ARP1YHR129C OXP1P28273 1286 aa9.06□□□□□ -0.96
ARP1YHR129C DMA1P38823 416 aa9.04□□□□□ -0.96
ARP1YHR129C SIS1P25294 352 aaKnown RBP8.97□□□□□ -0.97
ARP1YHR129C YIL055CP40523 627 aaKnown RBP8.97□□□□□ -0.97
ARP1YHR129C PTP3P40048 928 aa8.95□□□□□ -0.98
ARP1YHR129C EPS1P40557 701 aa8.95□□□□□ -0.98
ARP1YHR129C BDF1P35817 686 aa8.91□□□□□ -0.98
ARP1YHR129C UBP9P39967 754 aa8.9□□□□□ -0.98
ARP1YHR129C LEO1P38439 464 aa8.89□□□□□ -0.99
ARP1YHR129C RSM7P47150 247 aa8.83□□□□□ -1
ARP1YHR129C BBC1P47068 1157 aa8.79□□□□□ -1
ARP1YHR129C YAH1Q12184 172 aaKnown RBP8.77□□□□□ -1.01
ARP1YHR129C AI2P03876 854 aa8.75□□□□□ -1.01
ARP1YHR129C MST1P07236 462 aa8.71□□□□□ -1.02
ARP1YHR129C NSR1P27476 414 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
ARP1YHR129C YOR238WQ08634 303 aa8.68□□□□□ -1.02
ARP1YHR129C SSP1P38871 571 aa8.64□□□□□ -1.03
ARP1YHR129C YLR271WQ06152 274 aa8.63□□□□□ -1.03
ARP1YHR129C YAP5P40574 245 aa8.6□□□□□ -1.03
ARP1YHR129C YBL029C-AQ3E756 94 aa8.57□□□□□ -1.04
ARP1YHR129C PSD2P53037 1138 aaKnown RBP8.53□□□□□ -1.04
ARP1YHR129C VNX1P42839 908 aa8.49□□□□□ -1.05
ARP1YHR129C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
ARP1YHR129C MRM1P25270 412 aa8.42□□□□□ -1.06
ARP1YHR129C GTT3P39996 337 aa8.42□□□□□ -1.06
ARP1YHR129C SPP1Q03012 353 aa8.42□□□□□ -1.06
ARP1YHR129C WSC3Q12215 556 aa8.42□□□□□ -1.06
ARP1YHR129C LEU3P08638 886 aa8.36□□□□□ -1.07
ARP1YHR129C SAS10Q12136 610 aaPredicted RBP8.36□□□□□ -1.07
ARP1YHR129C TIF11P38912 153 aaKnown RBP8.34□□□□□ -1.07
ARP1YHR129C PIB1Q06651 286 aa8.33□□□□□ -1.08
ARP1YHR129C MGA2P40578 1113 aa8.32□□□□□ -1.08
ARP1YHR129C CST9Q06032 482 aa8.3□□□□□ -1.08
ARP1YHR129C AIM44Q99299 758 aa8.29□□□□□ -1.08
ARP1YHR129C NAP1P25293 417 aaKnown RBP8.26□□□□□ -1.09
ARP1YHR129C RTG3P38165 486 aa8.25□□□□□ -1.09
ARP1YHR129C YMR1P47147 688 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
ARP1YHR129C VPS29P38759 282 aa8.24□□□□□ -1.09
ARP1YHR129C FKH1P40466 484 aa8.23□□□□□ -1.09
ARP1YHR129C ULI1P43604 169 aa8.23□□□□□ -1.09
ARP1YHR129C MSB4Q12317 492 aa8.23□□□□□ -1.09
ARP1YHR129C AIR2Q12476 344 aaKnown RBP8.23□□□□□ -1.09
ARP1YHR129C DBP1P24784 617 aaKnown RBP8.21□□□□□ -1.1
ARP1YHR129C URN1Q06525 465 aaKnown RBP8.21□□□□□ -1.1
ARP1YHR129C IOC2Q12072 812 aa8.2□□□□□ -1.1
ARP1YHR129C LDB19Q12502 818 aa8.2□□□□□ -1.1
ARP1YHR129C YJL171CP46992 396 aa8.19□□□□□ -1.1
ARP1YHR129C EAP1P36041 632 aaKnown RBP8.18□□□□□ -1.1
ARP1YHR129C YFR006WP43590 535 aa8.16□□□□□ -1.1
ARP1YHR129C YOL036WQ08206 761 aa8.16□□□□□ -1.1
ARP1YHR129C IFH1P39520 1085 aa8.15□□□□□ -1.1
ARP1YHR129C IOC4Q04213 475 aa8.15□□□□□ -1.1
ARP1YHR129C STS1P38637 319 aa8.14□□□□□ -1.11
ARP1YHR129C SET4P42948 560 aa8.14□□□□□ -1.11
ARP1YHR129C VMA1P17255 1071 aaKnown RBP8.13□□□□□ -1.11
ARP1YHR129C DMA2P53924 522 aa8.12□□□□□ -1.11
ARP1YHR129C RCR1P38212 213 aa8.11□□□□□ -1.11
ARP1YHR129C SAM3Q08986 587 aa8.1□□□□□ -1.11
ARP1YHR129C TRP5P00931 707 aaKnown RBP8.09□□□□□ -1.11
ARP1YHR129C RPN1P38764 993 aaKnown RBP8.09□□□□□ -1.11
ARP1YHR129C BMT6Q12291 365 aa8.07□□□□□ -1.12
ARP1YHR129C RTG1P32607 177 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms