RNA–Protein interactions for RNA: YGR228W

YGR228W, Transcript of Dubious open reading frame, yeastyeast

Gene YGR228W, Length 345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR228WYGR228W MTC1P47018 478 aaKnown RBP11.4□□□□□ -0.58
YGR228WYGR228W DRS1P32892 752 aaKnown RBP11.16□□□□□ -0.62
YGR228WYGR228W FAP1P53971 965 aa10.97□□□□□ -0.65
YGR228WYGR228W PRY3P47033 881 aa10.42□□□□□ -0.74
YGR228WYGR228W YCK3P39962 524 aa9.93□□□□□ -0.82
YGR228WYGR228W HAA1Q12753 694 aaKnown RBP9.66□□□□□ -0.86
YGR228WYGR228W DIP2Q12220 943 aaPredicted RBP9.59□□□□□ -0.87
YGR228WYGR228W AAD16Q02895 342 aa9.58□□□□□ -0.88
YGR228WYGR228W BFR2Q06631 534 aaKnown RBP9.52□□□□□ -0.89
YGR228WYGR228W PRI1P10363 409 aa9.43□□□□□ -0.9
YGR228WYGR228W AVT3P36062 692 aa9.4□□□□□ -0.9
YGR228WYGR228W ISW2Q08773 1120 aa9.33□□□□□ -0.92
YGR228WYGR228W RPG1P38249 964 aaKnown RBP9.22□□□□□ -0.93
YGR228WYGR228W RSE1Q04693 1361 aaKnown RBP9.13□□□□□ -0.95
YGR228WYGR228W TSR3Q12094 313 aaKnown RBP8.84□□□□□ -0.99
YGR228WYGR228W RPL17AP05740 184 aaKnown RBP8.81□□□□□ -1
YGR228WYGR228W RPL17BP46990 184 aaKnown RBP8.81□□□□□ -1
YGR228WYGR228W BUD31P25337 157 aaPredicted RBP8.76□□□□□ -1.01
YGR228WYGR228W TFA1P36100 482 aa8.76□□□□□ -1.01
YGR228WYGR228W REB1P21538 810 aa8.73□□□□□ -1.01
YGR228WYGR228W YGL015CP33199 130 aa8.6□□□□□ -1.03
YGR228WYGR228W MRPL32P25348 183 aa8.48□□□□□ -1.05
YGR228WYGR228W SPT21P35209 758 aa8.48□□□□□ -1.05
YGR228WYGR228W RIM101P33400 625 aa8.3□□□□□ -1.08
YGR228WYGR228W YKR023WP36119 530 aaKnown RBP8.27□□□□□ -1.09
YGR228WYGR228W CDC27P38042 758 aa8.16□□□□□ -1.1
YGR228WYGR228W TFC8Q12308 588 aa8.1□□□□□ -1.11
YGR228WYGR228W HOP09932 586 aa8.09□□□□□ -1.11
YGR228WYGR228W SIS1P25294 352 aaKnown RBP8.09□□□□□ -1.11
YGR228WYGR228W DCD1P06773 312 aa8.04□□□□□ -1.12
YGR228WYGR228W OXP1P28273 1286 aa8.03□□□□□ -1.12
YGR228WYGR228W YIL055CP40523 627 aaKnown RBP7.9□□□□□ -1.14
YGR228WYGR228W PTP3P40048 928 aa7.88□□□□□ -1.15
YGR228WYGR228W UBP10P53874 792 aaPredicted RBP7.86□□□□□ -1.15
YGR228WYGR228W YAH1Q12184 172 aaKnown RBP7.86□□□□□ -1.15
YGR228WYGR228W BCH2P36122 765 aa7.85□□□□□ -1.15
YGR228WYGR228W MAP2P38174 421 aaKnown RBP7.85□□□□□ -1.15
YGR228WYGR228W SSP1P38871 571 aa7.79□□□□□ -1.16
YGR228WYGR228W RSM7P47150 247 aa7.79□□□□□ -1.16
YGR228WYGR228W SCY1P53009 804 aa7.78□□□□□ -1.16
YGR228WYGR228W YLR271WQ06152 274 aa7.76□□□□□ -1.17
YGR228WYGR228W UBP9P39967 754 aa7.7□□□□□ -1.18
YGR228WYGR228W EPS1P40557 701 aa7.69□□□□□ -1.18
YGR228WYGR228W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
YGR228WYGR228W AI2P03876 854 aa7.68□□□□□ -1.18
YGR228WYGR228W SLX5P32828 619 aaKnown RBP7.65□□□□□ -1.18
YGR228WYGR228W BBC1P47068 1157 aa7.65□□□□□ -1.18
YGR228WYGR228W BDF1P35817 686 aa7.64□□□□□ -1.19
YGR228WYGR228W PSD2P53037 1138 aaKnown RBP7.59□□□□□ -1.19
YGR228WYGR228W MGA2P40578 1113 aa7.55□□□□□ -1.2
YGR228WYGR228W TIF4632P39936 914 aaKnown RBP7.53□□□□□ -1.2
YGR228WYGR228W CST9Q06032 482 aa7.51□□□□□ -1.21
YGR228WYGR228W TGL3P40308 642 aa7.49□□□□□ -1.21
YGR228WYGR228W MRM1P25270 412 aa7.43□□□□□ -1.22
YGR228WYGR228W NSR1P27476 414 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
YGR228WYGR228W RTG3P38165 486 aa7.31□□□□□ -1.24
YGR228WYGR228W RCR1P38212 213 aa7.28□□□□□ -1.24
YGR228WYGR228W YAP5P40574 245 aa7.27□□□□□ -1.25
YGR228WYGR228W VPS29P38759 282 aa7.26□□□□□ -1.25
YGR228WYGR228W MST1P07236 462 aa7.24□□□□□ -1.25
YGR228WYGR228W YOR238WQ08634 303 aa7.24□□□□□ -1.25
YGR228WYGR228W YMR1P47147 688 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
YGR228WYGR228W RAM2P29703 316 aa7.2□□□□□ -1.26
YGR228WYGR228W DBP1P24784 617 aaKnown RBP7.17□□□□□ -1.26
YGR228WYGR228W STS1P38637 319 aa7.17□□□□□ -1.26
YGR228WYGR228W PIB1Q06651 286 aa7.16□□□□□ -1.26
YGR228WYGR228W YFR006WP43590 535 aa7.15□□□□□ -1.26
YGR228WYGR228W MAK11P20484 414 aaKnown RBP7.12□□□□□ -1.27
YGR228WYGR228W DMA1P38823 416 aa7.1□□□□□ -1.27
YGR228WYGR228W GTT3P39996 337 aa7.09□□□□□ -1.27
YGR228WYGR228W RQC2Q12532 1038 aaKnown RBP7.09□□□□□ -1.27
YGR228WYGR228W YBL029C-AQ3E756 94 aa7.09□□□□□ -1.27
YGR228WYGR228W VMA1P17255 1071 aaKnown RBP7.06□□□□□ -1.28
YGR228WYGR228W COQ8P27697 501 aa7.02□□□□□ -1.29
YGR228WYGR228W WSC3Q12215 556 aa7.02□□□□□ -1.29
YGR228WYGR228W MIF2P35201 549 aa7.01□□□□□ -1.29
YGR228WYGR228W SAM3Q08986 587 aa7□□□□□ -1.29
YGR228WYGR228W EDS1P38073 919 aa6.99□□□□□ -1.29
YGR228WYGR228W VNX1P42839 908 aa6.99□□□□□ -1.29
YGR228WYGR228W SET1P38827 1080 aaKnown RBP6.97□□□□□ -1.29
YGR228WYGR228W YOL036WQ08206 761 aa6.97□□□□□ -1.29
YGR228WYGR228W MSB4Q12317 492 aa6.95□□□□□ -1.3
YGR228WYGR228W AIR2Q12476 344 aaKnown RBP6.95□□□□□ -1.3
YGR228WYGR228W PTC3P34221 468 aaKnown RBP6.94□□□□□ -1.3
YGR228WYGR228W SET4P42948 560 aa6.94□□□□□ -1.3
YGR228WYGR228W SPP1Q03012 353 aa6.93□□□□□ -1.3
YGR228WYGR228W NOP53Q12080 455 aaKnown RBP6.93□□□□□ -1.3
YGR228WYGR228W TIF11P38912 153 aaKnown RBP6.92□□□□□ -1.3
YGR228WYGR228W GYP5Q12344 894 aa6.92□□□□□ -1.3
YGR228WYGR228W GRE2Q12068 342 aaKnown RBP6.9□□□□□ -1.3
YGR228WYGR228W YJL171CP46992 396 aa6.89□□□□□ -1.31
YGR228WYGR228W ABP1P15891 592 aaKnown RBP6.88□□□□□ -1.31
YGR228WYGR228W EAP1P36041 632 aaKnown RBP6.88□□□□□ -1.31
YGR228WYGR228W ATH1P48016 1211 aa6.88□□□□□ -1.31
YGR228WYGR228W ULI1P43604 169 aa6.87□□□□□ -1.31
YGR228WYGR228W GUT1P32190 709 aa6.86□□□□□ -1.31
YGR228WYGR228W DCW1P36091 449 aa6.86□□□□□ -1.31
YGR228WYGR228W TRP5P00931 707 aaKnown RBP6.85□□□□□ -1.31
YGR228WYGR228W IFH1P39520 1085 aa6.85□□□□□ -1.31
YGR228WYGR228W FKH1P40466 484 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms