RNA–Protein interactions for RNA: YGR101W

PCP1, Transcript of Mitochondrial serine protease, yeast

Gene PCP1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCP1	YGR101W	MON2	P48563	1636 aa	Predicted RBP	17.08	■□□□□ 0.32
PCP1	YGR101W	INO80	P53115	1489 aa		16.95	■□□□□ 0.3
PCP1	YGR101W	SWR1	Q05471	1514 aa		16.25	■□□□□ 0.19
PCP1	YGR101W	TCB3	Q03640	1545 aa	Known RBP	16.21	■□□□□ 0.19
PCP1	YGR101W	DNA2	P38859	1522 aa		16.19	■□□□□ 0.18
PCP1	YGR101W	TY1B-DR4	Q07793	1604 aa		16.16	■□□□□ 0.18
PCP1	YGR101W	KOG1	P38873	1557 aa		16	■□□□□ 0.15
PCP1	YGR101W	SGS1	P35187	1447 aa		15.94	■□□□□ 0.14
PCP1	YGR101W	HSL1	P34244	1518 aa		15.6	■□□□□ 0.09
PCP1	YGR101W	SPT6	P23615	1451 aa	Known RBP	15.56	■□□□□ 0.08
PCP1	YGR101W	RSE1	Q04693	1361 aa	Known RBP	15.49	■□□□□ 0.07
PCP1	YGR101W	SPA2	P23201	1466 aa	Known RBP	15.37	■□□□□ 0.05
PCP1	YGR101W	HIR3	P47171	1648 aa		15.25	■□□□□ 0.03
PCP1	YGR101W	ECM5	Q03214	1411 aa		15.17	■□□□□ 0.02
PCP1	YGR101W	THO2	P53552	1597 aa	Known RBP	15.13	■□□□□ 0.01
PCP1	YGR101W	BUD4	P47136	1447 aa		15.1	■□□□□ 0.01
PCP1	YGR101W	MDS3	P53094	1487 aa		14.96	□□□□□ -0.01
PCP1	YGR101W	XRN1	P22147	1528 aa	Known RBP	14.94	□□□□□ -0.02
PCP1	YGR101W	SSN2	P38931	1420 aa		14.85	□□□□□ -0.03
PCP1	YGR101W	PEP1	P32319	1579 aa		14.84	□□□□□ -0.03
PCP1	YGR101W	ATG2	P53855	1592 aa		14.74	□□□□□ -0.05
PCP1	YGR101W	REV3	P14284	1504 aa		14.7	□□□□□ -0.06
PCP1	YGR101W	MTC1	P47018	478 aa	Known RBP	14.66	□□□□□ -0.06
PCP1	YGR101W	SIN3	P22579	1536 aa		14.57	□□□□□ -0.08
PCP1	YGR101W	BPT1	P14772	1559 aa		14.53	□□□□□ -0.08
PCP1	YGR101W	SSK2	P53599	1579 aa		14.46	□□□□□ -0.09
PCP1	YGR101W	SKI3	P17883	1432 aa	Known RBP	14.42	□□□□□ -0.1
PCP1	YGR101W	TAF2	P23255	1407 aa		14.42	□□□□□ -0.1
PCP1	YGR101W	DRS1	P32892	752 aa	Known RBP	14.38	□□□□□ -0.11
PCP1	YGR101W	ESP1	Q03018	1630 aa		14.33	□□□□□ -0.12
PCP1	YGR101W	YCF1	P39109	1515 aa	Known RBP	14.31	□□□□□ -0.12
PCP1	YGR101W	UFD4	P33202	1483 aa		14.2	□□□□□ -0.14
PCP1	YGR101W	YPK9	Q12697	1472 aa		14.18	□□□□□ -0.14
PCP1	YGR101W	SCC2	Q04002	1493 aa		14.16	□□□□□ -0.14
PCP1	YGR101W	MYO2	P19524	1574 aa	Known RBP	14.14	□□□□□ -0.15
PCP1	YGR101W	RPO31	P04051	1460 aa		14.08	□□□□□ -0.16
PCP1	YGR101W	CDC25	P04821	1589 aa		14	□□□□□ -0.17
PCP1	YGR101W	CHD1	P32657	1468 aa		13.99	□□□□□ -0.17
PCP1	YGR101W	TY2B-LR1	P0C2J3	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-F	P0CX63	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-GR2	P0CX64	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-C	P25384	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-DR2	Q03494	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY1B-DR1	Q03855	1755 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-DR3	Q07791	1770 aa	Known RBP	13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-OR1	Q12113	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-DR1	Q12472	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	TY2B-OR2	Q12501	1770 aa		13.96	□□□□□ -0.18
PCP1	YGR101W	DNF1	P32660	1571 aa		13.93	□□□□□ -0.18
PCP1	YGR101W	MET5	P47169	1442 aa		13.91	□□□□□ -0.18
PCP1	YGR101W	TY1B-BR	Q12193	1756 aa		13.89	□□□□□ -0.19
PCP1	YGR101W	TY1B-GR3	Q12316	1755 aa		13.89	□□□□□ -0.19
PCP1	YGR101W	TY1B-OR	Q92393	1755 aa		13.89	□□□□□ -0.19
PCP1	YGR101W	ESC1	Q03661	1658 aa	Known RBP	13.88	□□□□□ -0.19
PCP1	YGR101W	PAN1	P32521	1480 aa		13.86	□□□□□ -0.19
PCP1	YGR101W	TOP2	P06786	1428 aa	Known RBP	13.84	□□□□□ -0.19
PCP1	YGR101W	RKR1	Q04781	1562 aa		13.81	□□□□□ -0.2
PCP1	YGR101W	RPA190	P10964	1664 aa	Known RBP	13.78	□□□□□ -0.2
PCP1	YGR101W	TY2B-B	Q12491	1770 aa		13.78	□□□□□ -0.2
PCP1	YGR101W	TY1B-H	O13535	1793 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-DR5	P0C2I2	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-DR6	P0C2I3	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-LR2	P0C2I5	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-PR2	P0C2J0	1756 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-JR1	P47098	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-ML2	Q03434	1755 aa	Known RBP	13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-ER1	Q03612	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-ML1	Q04711	1755 aa	Known RBP	13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-GR2	Q12269	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-OL	Q12273	1755 aa		13.76	□□□□□ -0.21
PCP1	YGR101W	TY1B-PL	Q12414	1755 aa	Known RBP	13.76	□□□□□ -0.21
PCP1	YGR101W	LTE1	P07866	1435 aa		13.75	□□□□□ -0.21
PCP1	YGR101W	TY1B-DR3	Q99231	1755 aa		13.75	□□□□□ -0.21
PCP1	YGR101W	RQC2	Q12532	1038 aa	Known RBP	13.73	□□□□□ -0.21
PCP1	YGR101W	POL1	P13382	1468 aa		13.73	□□□□□ -0.21
PCP1	YGR101W	MMS22	Q06164	1454 aa		13.7	□□□□□ -0.22
PCP1	YGR101W	SMC4	Q12267	1418 aa		13.63	□□□□□ -0.23
PCP1	YGR101W	YOR1	P53049	1477 aa		13.61	□□□□□ -0.23
PCP1	YGR101W	TRM732	Q03496	1420 aa		13.61	□□□□□ -0.23
PCP1	YGR101W	BNI1	P41832	1953 aa		13.61	□□□□□ -0.23
PCP1	YGR101W	GEA2	P39993	1459 aa	Known RBP	13.58	□□□□□ -0.24
PCP1	YGR101W	STU1	P38198	1513 aa		13.56	□□□□□ -0.24
PCP1	YGR101W	SPP41	P38904	1435 aa		13.55	□□□□□ -0.24
PCP1	YGR101W	MIF2	P35201	549 aa		13.51	□□□□□ -0.25
PCP1	YGR101W	NUP159	P40477	1460 aa		13.49	□□□□□ -0.25
PCP1	YGR101W	YRF1-1	P0CX20	1796 aa		13.49	□□□□□ -0.25
PCP1	YGR101W	YRF1-5	P0CX21	1796 aa		13.49	□□□□□ -0.25
PCP1	YGR101W	YRF1-8	P0CX22	1796 aa		13.49	□□□□□ -0.25
PCP1	YGR101W	TY1B-JR2	P47100	1755 aa	Known RBP	13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-ER2	Q03619	1755 aa		13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-MR1	Q04214	1755 aa		13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-MR2	Q04670	1755 aa	Known RBP	13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-LR1	Q12088	1755 aa	Known RBP	13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-NL1	Q12112	1755 aa		13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-GR1	Q12141	1755 aa		13.48	□□□□□ -0.25
PCP1	YGR101W	TY1B-BL	Q12490	1755 aa		13.48	□□□□□ -0.25
PCP1	YGR101W	NTE1	Q04958	1679 aa		13.47	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms