RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeastyeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EMP47YFL048C MTC1P47018 478 aaKnown RBP12.78□□□□□ -0.36
EMP47YFL048C DRS1P32892 752 aaKnown RBP12.35□□□□□ -0.43
EMP47YFL048C FAP1P53971 965 aa11.35□□□□□ -0.59
EMP47YFL048C PRY3P47033 881 aa10.7□□□□□ -0.7
EMP47YFL048C DIP2Q12220 943 aaPredicted RBP10.67□□□□□ -0.7
EMP47YFL048C PRI1P10363 409 aa10.53□□□□□ -0.72
EMP47YFL048C ISW2Q08773 1120 aa10.52□□□□□ -0.73
EMP47YFL048C BFR2Q06631 534 aaKnown RBP10.48□□□□□ -0.73
EMP47YFL048C AAD16Q02895 342 aa10.44□□□□□ -0.74
EMP47YFL048C AVT3P36062 692 aa10.4□□□□□ -0.74
EMP47YFL048C RPG1P38249 964 aaKnown RBP10.35□□□□□ -0.75
EMP47YFL048C RSE1Q04693 1361 aaKnown RBP10.22□□□□□ -0.77
EMP47YFL048C YCK3P39962 524 aa10.13□□□□□ -0.79
EMP47YFL048C HAA1Q12753 694 aaKnown RBP9.96□□□□□ -0.82
EMP47YFL048C TSR3Q12094 313 aaKnown RBP9.94□□□□□ -0.82
EMP47YFL048C RPL17AP05740 184 aaKnown RBP9.84□□□□□ -0.83
EMP47YFL048C RPL17BP46990 184 aaKnown RBP9.84□□□□□ -0.83
EMP47YFL048C REB1P21538 810 aa9.78□□□□□ -0.84
EMP47YFL048C MRPL32P25348 183 aa9.59□□□□□ -0.87
EMP47YFL048C TFA1P36100 482 aa9.55□□□□□ -0.88
EMP47YFL048C SPT21P35209 758 aa9.45□□□□□ -0.9
EMP47YFL048C YKR023WP36119 530 aaKnown RBP9.24□□□□□ -0.93
EMP47YFL048C RIM101P33400 625 aa9.23□□□□□ -0.93
EMP47YFL048C YGL015CP33199 130 aa9.18□□□□□ -0.94
EMP47YFL048C CDC27P38042 758 aa9.15□□□□□ -0.94
EMP47YFL048C TFC8Q12308 588 aa9.06□□□□□ -0.96
EMP47YFL048C HOP09932 586 aa9.03□□□□□ -0.96
EMP47YFL048C DCD1P06773 312 aa8.96□□□□□ -0.98
EMP47YFL048C OXP1P28273 1286 aa8.9□□□□□ -0.98
EMP47YFL048C UBP10P53874 792 aaPredicted RBP8.9□□□□□ -0.98
EMP47YFL048C MAP2P38174 421 aaKnown RBP8.82□□□□□ -1
EMP47YFL048C YIL055CP40523 627 aaKnown RBP8.81□□□□□ -1
EMP47YFL048C BCH2P36122 765 aa8.78□□□□□ -1
EMP47YFL048C PTP3P40048 928 aa8.78□□□□□ -1
EMP47YFL048C SCY1P53009 804 aa8.73□□□□□ -1.01
EMP47YFL048C YAH1Q12184 172 aaKnown RBP8.7□□□□□ -1.02
EMP47YFL048C RSM7P47150 247 aa8.67□□□□□ -1.02
EMP47YFL048C BUD31P25337 157 aaPredicted RBP8.63□□□□□ -1.03
EMP47YFL048C SLX5P32828 619 aaKnown RBP8.62□□□□□ -1.03
EMP47YFL048C SSP1P38871 571 aa8.61□□□□□ -1.03
EMP47YFL048C EPS1P40557 701 aa8.59□□□□□ -1.03
EMP47YFL048C YLR271WQ06152 274 aa8.58□□□□□ -1.04
EMP47YFL048C BBC1P47068 1157 aa8.56□□□□□ -1.04
EMP47YFL048C AI2P03876 854 aa8.55□□□□□ -1.04
EMP47YFL048C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
EMP47YFL048C BDF1P35817 686 aa8.54□□□□□ -1.04
EMP47YFL048C TIF4632P39936 914 aaKnown RBP8.54□□□□□ -1.04
EMP47YFL048C TGL3P40308 642 aa8.49□□□□□ -1.05
EMP47YFL048C PSD2P53037 1138 aaKnown RBP8.42□□□□□ -1.06
EMP47YFL048C MGA2P40578 1113 aa8.37□□□□□ -1.07
EMP47YFL048C CST9Q06032 482 aa8.29□□□□□ -1.08
EMP47YFL048C NSR1P27476 414 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
EMP47YFL048C MRM1P25270 412 aa8.26□□□□□ -1.09
EMP47YFL048C UBP9P39967 754 aa8.22□□□□□ -1.09
EMP47YFL048C YAP5P40574 245 aa8.19□□□□□ -1.1
EMP47YFL048C YOR238WQ08634 303 aa8.18□□□□□ -1.1
EMP47YFL048C MST1P07236 462 aa8.17□□□□□ -1.1
EMP47YFL048C SIS1P25294 352 aaKnown RBP8.16□□□□□ -1.1
EMP47YFL048C RTG3P38165 486 aa8.14□□□□□ -1.11
EMP47YFL048C VPS29P38759 282 aa8.06□□□□□ -1.12
EMP47YFL048C YMR1P47147 688 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
EMP47YFL048C RCR1P38212 213 aa8.03□□□□□ -1.12
EMP47YFL048C DBP1P24784 617 aaKnown RBP7.99□□□□□ -1.13
EMP47YFL048C GTT3P39996 337 aa7.99□□□□□ -1.13
EMP47YFL048C PIB1Q06651 286 aa7.98□□□□□ -1.13
EMP47YFL048C STS1P38637 319 aa7.96□□□□□ -1.14
EMP47YFL048C RAM2P29703 316 aa7.94□□□□□ -1.14
EMP47YFL048C YFR006WP43590 535 aa7.94□□□□□ -1.14
EMP47YFL048C YBL029C-AQ3E756 94 aa7.94□□□□□ -1.14
EMP47YFL048C MAK11P20484 414 aaKnown RBP7.9□□□□□ -1.14
EMP47YFL048C VNX1P42839 908 aa7.9□□□□□ -1.14
EMP47YFL048C WSC3Q12215 556 aa7.89□□□□□ -1.15
EMP47YFL048C VMA1P17255 1071 aaKnown RBP7.88□□□□□ -1.15
EMP47YFL048C SPP1Q03012 353 aa7.84□□□□□ -1.15
EMP47YFL048C SAM3Q08986 587 aa7.84□□□□□ -1.15
EMP47YFL048C MSB4Q12317 492 aa7.84□□□□□ -1.15
EMP47YFL048C TIF11P38912 153 aaKnown RBP7.81□□□□□ -1.16
EMP47YFL048C YOL036WQ08206 761 aa7.8□□□□□ -1.16
EMP47YFL048C EAP1P36041 632 aaKnown RBP7.78□□□□□ -1.16
EMP47YFL048C MIF2P35201 549 aa7.78□□□□□ -1.16
EMP47YFL048C SET4P42948 560 aa7.78□□□□□ -1.16
EMP47YFL048C COQ8P27697 501 aa7.77□□□□□ -1.17
EMP47YFL048C ABP1P15891 592 aaKnown RBP7.76□□□□□ -1.17
EMP47YFL048C NOP53Q12080 455 aaKnown RBP7.75□□□□□ -1.17
EMP47YFL048C GYP5Q12344 894 aa7.75□□□□□ -1.17
EMP47YFL048C EDS1P38073 919 aa7.74□□□□□ -1.17
EMP47YFL048C ULI1P43604 169 aa7.74□□□□□ -1.17
EMP47YFL048C PTC3P34221 468 aaKnown RBP7.72□□□□□ -1.17
EMP47YFL048C GRE2Q12068 342 aaKnown RBP7.7□□□□□ -1.18
EMP47YFL048C IOC2Q12072 812 aa7.7□□□□□ -1.18
EMP47YFL048C TRP5P00931 707 aaKnown RBP7.68□□□□□ -1.18
EMP47YFL048C SET1P38827 1080 aaKnown RBP7.68□□□□□ -1.18
EMP47YFL048C HTA1P04911 132 aaKnown RBP7.67□□□□□ -1.18
EMP47YFL048C HTA2P04912 132 aa7.67□□□□□ -1.18
EMP47YFL048C ATH1P48016 1211 aa7.67□□□□□ -1.18
EMP47YFL048C LDB19Q12502 818 aa7.67□□□□□ -1.18
EMP47YFL048C GUT1P32190 709 aa7.66□□□□□ -1.18
EMP47YFL048C RQC2Q12532 1038 aaKnown RBP7.66□□□□□ -1.18
EMP47YFL048C DCW1P36091 449 aa7.65□□□□□ -1.18
EMP47YFL048C DMA1P38823 416 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms