RNA–Protein interactions for RNA: YFL045C

SEC53, Transcript of Phosphomannomutase, yeastyeast

Gene SEC53, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC53YFL045C MTC1P47018 478 aaKnown RBP11.12□□□□□ -0.63
SEC53YFL045C DRS1P32892 752 aaKnown RBP10.67□□□□□ -0.7
SEC53YFL045C FAP1P53971 965 aa9.46□□□□□ -0.9
SEC53YFL045C DIP2Q12220 943 aaPredicted RBP9.24□□□□□ -0.93
SEC53YFL045C PRI1P10363 409 aa9.17□□□□□ -0.94
SEC53YFL045C AVT3P36062 692 aa9.08□□□□□ -0.96
SEC53YFL045C ISW2Q08773 1120 aa9.08□□□□□ -0.96
SEC53YFL045C BFR2Q06631 534 aaKnown RBP9.04□□□□□ -0.96
SEC53YFL045C AAD16Q02895 342 aa9.03□□□□□ -0.96
SEC53YFL045C RPG1P38249 964 aaKnown RBP8.98□□□□□ -0.97
SEC53YFL045C PRY3P47033 881 aa8.9□□□□□ -0.98
SEC53YFL045C RSE1Q04693 1361 aaKnown RBP8.84□□□□□ -0.99
SEC53YFL045C TSR3Q12094 313 aaKnown RBP8.63□□□□□ -1.03
SEC53YFL045C YCK3P39962 524 aa8.58□□□□□ -1.04
SEC53YFL045C RPL17AP05740 184 aaKnown RBP8.53□□□□□ -1.04
SEC53YFL045C RPL17BP46990 184 aaKnown RBP8.53□□□□□ -1.04
SEC53YFL045C HAA1Q12753 694 aaKnown RBP8.42□□□□□ -1.06
SEC53YFL045C REB1P21538 810 aa8.41□□□□□ -1.06
SEC53YFL045C TFA1P36100 482 aa8.3□□□□□ -1.08
SEC53YFL045C MRPL32P25348 183 aa8.28□□□□□ -1.08
SEC53YFL045C SPT21P35209 758 aa8.28□□□□□ -1.08
SEC53YFL045C YKR023WP36119 530 aaKnown RBP8.07□□□□□ -1.12
SEC53YFL045C RIM101P33400 625 aa8.05□□□□□ -1.12
SEC53YFL045C CDC27P38042 758 aa8□□□□□ -1.13
SEC53YFL045C TFC8Q12308 588 aa7.9□□□□□ -1.14
SEC53YFL045C YGL015CP33199 130 aa7.86□□□□□ -1.15
SEC53YFL045C HOP09932 586 aa7.84□□□□□ -1.15
SEC53YFL045C DCD1P06773 312 aa7.79□□□□□ -1.16
SEC53YFL045C OXP1P28273 1286 aa7.79□□□□□ -1.16
SEC53YFL045C UBP10P53874 792 aaPredicted RBP7.73□□□□□ -1.17
SEC53YFL045C MAP2P38174 421 aaKnown RBP7.68□□□□□ -1.18
SEC53YFL045C BCH2P36122 765 aa7.64□□□□□ -1.19
SEC53YFL045C YIL055CP40523 627 aaKnown RBP7.57□□□□□ -1.2
SEC53YFL045C SCY1P53009 804 aa7.57□□□□□ -1.2
SEC53YFL045C PTP3P40048 928 aa7.54□□□□□ -1.2
SEC53YFL045C RSM7P47150 247 aa7.52□□□□□ -1.21
SEC53YFL045C YAH1Q12184 172 aaKnown RBP7.5□□□□□ -1.21
SEC53YFL045C EPS1P40557 701 aa7.48□□□□□ -1.21
SEC53YFL045C YLR271WQ06152 274 aa7.48□□□□□ -1.21
SEC53YFL045C SLX5P32828 619 aaKnown RBP7.46□□□□□ -1.22
SEC53YFL045C SSP1P38871 571 aa7.46□□□□□ -1.22
SEC53YFL045C BDF1P35817 686 aa7.44□□□□□ -1.22
SEC53YFL045C AI2P03876 854 aa7.41□□□□□ -1.22
SEC53YFL045C TGL3P40308 642 aa7.36□□□□□ -1.23
SEC53YFL045C BBC1P47068 1157 aa7.36□□□□□ -1.23
SEC53YFL045C PSD2P53037 1138 aaKnown RBP7.36□□□□□ -1.23
SEC53YFL045C TIF4632P39936 914 aaKnown RBP7.35□□□□□ -1.23
SEC53YFL045C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
SEC53YFL045C MGA2P40578 1113 aa7.24□□□□□ -1.25
SEC53YFL045C NSR1P27476 414 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
SEC53YFL045C CST9Q06032 482 aa7.22□□□□□ -1.25
SEC53YFL045C MST1P07236 462 aa7.15□□□□□ -1.26
SEC53YFL045C MRM1P25270 412 aa7.15□□□□□ -1.26
SEC53YFL045C BUD31P25337 157 aaPredicted RBP7.09□□□□□ -1.27
SEC53YFL045C YAP5P40574 245 aa7.08□□□□□ -1.28
SEC53YFL045C YOR238WQ08634 303 aa7.07□□□□□ -1.28
SEC53YFL045C VPS29P38759 282 aa7.05□□□□□ -1.28
SEC53YFL045C RTG3P38165 486 aa7.03□□□□□ -1.28
SEC53YFL045C RCR1P38212 213 aa7.02□□□□□ -1.29
SEC53YFL045C YMR1P47147 688 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
SEC53YFL045C UBP9P39967 754 aa6.97□□□□□ -1.29
SEC53YFL045C STS1P38637 319 aa6.95□□□□□ -1.3
SEC53YFL045C DBP1P24784 617 aaKnown RBP6.93□□□□□ -1.3
SEC53YFL045C RAM2P29703 316 aa6.93□□□□□ -1.3
SEC53YFL045C PIB1Q06651 286 aa6.9□□□□□ -1.3
SEC53YFL045C YFR006WP43590 535 aa6.88□□□□□ -1.31
SEC53YFL045C YBL029C-AQ3E756 94 aa6.88□□□□□ -1.31
SEC53YFL045C VNX1P42839 908 aa6.87□□□□□ -1.31
SEC53YFL045C MAK11P20484 414 aaKnown RBP6.86□□□□□ -1.31
SEC53YFL045C GTT3P39996 337 aa6.86□□□□□ -1.31
SEC53YFL045C VMA1P17255 1071 aaKnown RBP6.85□□□□□ -1.31
SEC53YFL045C SAM3Q08986 587 aa6.85□□□□□ -1.31
SEC53YFL045C WSC3Q12215 556 aa6.81□□□□□ -1.32
SEC53YFL045C MSB4Q12317 492 aa6.8□□□□□ -1.32
SEC53YFL045C YOL036WQ08206 761 aa6.79□□□□□ -1.32
SEC53YFL045C EDS1P38073 919 aa6.77□□□□□ -1.33
SEC53YFL045C TIF11P38912 153 aaKnown RBP6.77□□□□□ -1.33
SEC53YFL045C SPP1Q03012 353 aa6.75□□□□□ -1.33
SEC53YFL045C COQ8P27697 501 aa6.74□□□□□ -1.33
SEC53YFL045C IOC2Q12072 812 aa6.73□□□□□ -1.33
SEC53YFL045C SET4P42948 560 aa6.72□□□□□ -1.33
SEC53YFL045C NOP53Q12080 455 aaKnown RBP6.72□□□□□ -1.33
SEC53YFL045C PTC3P34221 468 aaKnown RBP6.71□□□□□ -1.34
SEC53YFL045C EAP1P36041 632 aaKnown RBP6.71□□□□□ -1.34
SEC53YFL045C ABP1P15891 592 aaKnown RBP6.7□□□□□ -1.34
SEC53YFL045C SIS1P25294 352 aaKnown RBP6.7□□□□□ -1.34
SEC53YFL045C ULI1P43604 169 aa6.7□□□□□ -1.34
SEC53YFL045C MIF2P35201 549 aa6.69□□□□□ -1.34
SEC53YFL045C GYP5Q12344 894 aa6.69□□□□□ -1.34
SEC53YFL045C TRP5P00931 707 aaKnown RBP6.67□□□□□ -1.34
SEC53YFL045C FKH1P40466 484 aa6.67□□□□□ -1.34
SEC53YFL045C SET1P38827 1080 aaKnown RBP6.65□□□□□ -1.34
SEC53YFL045C GRE2Q12068 342 aaKnown RBP6.65□□□□□ -1.34
SEC53YFL045C LDB19Q12502 818 aa6.64□□□□□ -1.35
SEC53YFL045C GUT1P32190 709 aa6.63□□□□□ -1.35
SEC53YFL045C HTA1P04911 132 aaKnown RBP6.62□□□□□ -1.35
SEC53YFL045C HTA2P04912 132 aa6.62□□□□□ -1.35
SEC53YFL045C NST1P53935 1240 aa6.62□□□□□ -1.35
SEC53YFL045C AIR2Q12476 344 aaKnown RBP6.62□□□□□ -1.35
SEC53YFL045C DCW1P36091 449 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms