RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C MTC1P47018 478 aaKnown RBP17.12■□□□□ 0.33
TCA17YEL048C DRS1P32892 752 aaKnown RBP16.67■□□□□ 0.26
TCA17YEL048C FAP1P53971 965 aa14.76□□□□□ -0.05
TCA17YEL048C DIP2Q12220 943 aaPredicted RBP14.37□□□□□ -0.11
TCA17YEL048C BFR2Q06631 534 aaKnown RBP14.19□□□□□ -0.14
TCA17YEL048C ISW2Q08773 1120 aa14.11□□□□□ -0.15
TCA17YEL048C PRI1P10363 409 aa14.05□□□□□ -0.16
TCA17YEL048C AVT3P36062 692 aa13.98□□□□□ -0.17
TCA17YEL048C AAD16Q02895 342 aa13.91□□□□□ -0.18
TCA17YEL048C RPG1P38249 964 aaKnown RBP13.9□□□□□ -0.18
TCA17YEL048C PRY3P47033 881 aa13.8□□□□□ -0.2
TCA17YEL048C RSE1Q04693 1361 aaKnown RBP13.73□□□□□ -0.21
TCA17YEL048C TSR3Q12094 313 aaKnown RBP13.34□□□□□ -0.27
TCA17YEL048C RPL17AP05740 184 aaKnown RBP13.25□□□□□ -0.29
TCA17YEL048C RPL17BP46990 184 aaKnown RBP13.25□□□□□ -0.29
TCA17YEL048C REB1P21538 810 aa13.18□□□□□ -0.3
TCA17YEL048C HAA1Q12753 694 aaKnown RBP12.99□□□□□ -0.33
TCA17YEL048C TFA1P36100 482 aa12.91□□□□□ -0.34
TCA17YEL048C YCK3P39962 524 aa12.89□□□□□ -0.35
TCA17YEL048C MRPL32P25348 183 aa12.87□□□□□ -0.35
TCA17YEL048C SPT21P35209 758 aa12.64□□□□□ -0.39
TCA17YEL048C RIM101P33400 625 aa12.37□□□□□ -0.43
TCA17YEL048C YKR023WP36119 530 aaKnown RBP12.36□□□□□ -0.43
TCA17YEL048C CDC27P38042 758 aa12.24□□□□□ -0.45
TCA17YEL048C HOP09932 586 aa12.15□□□□□ -0.46
TCA17YEL048C YGL015CP33199 130 aa12.15□□□□□ -0.46
TCA17YEL048C TFC8Q12308 588 aa12.14□□□□□ -0.47
TCA17YEL048C DCD1P06773 312 aa12.06□□□□□ -0.48
TCA17YEL048C OXP1P28273 1286 aa11.95□□□□□ -0.5
TCA17YEL048C YIL055CP40523 627 aaKnown RBP11.91□□□□□ -0.5
TCA17YEL048C UBP10P53874 792 aaPredicted RBP11.87□□□□□ -0.51
TCA17YEL048C PTP3P40048 928 aa11.85□□□□□ -0.51
TCA17YEL048C MAP2P38174 421 aaKnown RBP11.82□□□□□ -0.52
TCA17YEL048C YAH1Q12184 172 aaKnown RBP11.78□□□□□ -0.52
TCA17YEL048C BCH2P36122 765 aa11.76□□□□□ -0.53
TCA17YEL048C SCY1P53009 804 aa11.72□□□□□ -0.53
TCA17YEL048C RSM7P47150 247 aa11.67□□□□□ -0.54
TCA17YEL048C SSP1P38871 571 aa11.61□□□□□ -0.55
TCA17YEL048C SLX5P32828 619 aaKnown RBP11.55□□□□□ -0.56
TCA17YEL048C EPS1P40557 701 aa11.54□□□□□ -0.56
TCA17YEL048C YLR271WQ06152 274 aa11.54□□□□□ -0.56
TCA17YEL048C BBC1P47068 1157 aa11.53□□□□□ -0.56
TCA17YEL048C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56not detected
TCA17YEL048C AI2P03876 854 aa11.51□□□□□ -0.57
TCA17YEL048C BDF1P35817 686 aa11.46□□□□□ -0.57
TCA17YEL048C TIF4632P39936 914 aaKnown RBP11.44□□□□□ -0.58
TCA17YEL048C TGL3P40308 642 aa11.32□□□□□ -0.6
TCA17YEL048C PSD2P53037 1138 aaKnown RBP11.29□□□□□ -0.6
TCA17YEL048C MGA2P40578 1113 aa11.26□□□□□ -0.61
TCA17YEL048C CST9Q06032 482 aa11.17□□□□□ -0.62
TCA17YEL048C MRM1P25270 412 aa11.13□□□□□ -0.63
TCA17YEL048C NSR1P27476 414 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
TCA17YEL048C YAP5P40574 245 aa10.97□□□□□ -0.65
TCA17YEL048C RTG3P38165 486 aa10.96□□□□□ -0.65
TCA17YEL048C YOR238WQ08634 303 aa10.95□□□□□ -0.66
TCA17YEL048C MST1P07236 462 aa10.86□□□□□ -0.67
TCA17YEL048C UBP9P39967 754 aa10.84□□□□□ -0.67
TCA17YEL048C RCR1P38212 213 aa10.82□□□□□ -0.68
TCA17YEL048C VPS29P38759 282 aa10.82□□□□□ -0.68
TCA17YEL048C YMR1P47147 688 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
TCA17YEL048C BUD31P25337 157 aaPredicted RBP10.79□□□□□ -0.68
TCA17YEL048C PIB1Q06651 286 aa10.77□□□□□ -0.69
TCA17YEL048C DBP1P24784 617 aaKnown RBP10.75□□□□□ -0.69
TCA17YEL048C GTT3P39996 337 aa10.75□□□□□ -0.69
TCA17YEL048C YFR006WP43590 535 aa10.72□□□□□ -0.69
TCA17YEL048C RAM2P29703 316 aa10.68□□□□□ -0.7
TCA17YEL048C STS1P38637 319 aa10.68□□□□□ -0.7
TCA17YEL048C YBL029C-AQ3E756 94 aa10.63□□□□□ -0.71
TCA17YEL048C WSC3Q12215 556 aa10.62□□□□□ -0.71
TCA17YEL048C MAK11P20484 414 aaKnown RBP10.61□□□□□ -0.71
TCA17YEL048C VMA1P17255 1071 aaKnown RBP10.57□□□□□ -0.72
TCA17YEL048C VNX1P42839 908 aa10.55□□□□□ -0.72
TCA17YEL048C MIF2P35201 549 aa10.51□□□□□ -0.73
TCA17YEL048C SPP1Q03012 353 aa10.5□□□□□ -0.73
TCA17YEL048C RQC2Q12532 1038 aaKnown RBP10.48□□□□□ -0.73
TCA17YEL048C MSB4Q12317 492 aa10.47□□□□□ -0.73
TCA17YEL048C COQ8P27697 501 aa10.46□□□□□ -0.73
TCA17YEL048C YOL036WQ08206 761 aa10.46□□□□□ -0.73
TCA17YEL048C SAM3Q08986 587 aa10.46□□□□□ -0.73
TCA17YEL048C SET4P42948 560 aa10.45□□□□□ -0.74
TCA17YEL048C DMA1P38823 416 aa10.44□□□□□ -0.74
TCA17YEL048C TIF11P38912 153 aaKnown RBP10.44□□□□□ -0.74
TCA17YEL048C SIS1P25294 352 aaKnown RBP10.41□□□□□ -0.74
TCA17YEL048C EAP1P36041 632 aaKnown RBP10.41□□□□□ -0.74
TCA17YEL048C GYP5Q12344 894 aa10.4□□□□□ -0.74
TCA17YEL048C EDS1P38073 919 aa10.39□□□□□ -0.75
TCA17YEL048C ULI1P43604 169 aa10.38□□□□□ -0.75
TCA17YEL048C PTC3P34221 468 aaKnown RBP10.37□□□□□ -0.75
TCA17YEL048C SET1P38827 1080 aaKnown RBP10.37□□□□□ -0.75
TCA17YEL048C ABP1P15891 592 aaKnown RBP10.36□□□□□ -0.75
TCA17YEL048C GRE2Q12068 342 aaKnown RBP10.36□□□□□ -0.75
TCA17YEL048C NOP53Q12080 455 aaKnown RBP10.34□□□□□ -0.75
TCA17YEL048C ATH1P48016 1211 aa10.33□□□□□ -0.76
TCA17YEL048C DCW1P36091 449 aa10.31□□□□□ -0.76
TCA17YEL048C TRP5P00931 707 aaKnown RBP10.3□□□□□ -0.76
TCA17YEL048C HTA1P04911 132 aaKnown RBP10.29□□□□□ -0.76
TCA17YEL048C HTA2P04912 132 aa10.29□□□□□ -0.76
TCA17YEL048C IOC2Q12072 812 aa10.28□□□□□ -0.76
TCA17YEL048C GUT1P32190 709 aa10.27□□□□□ -0.77
TCA17YEL048C LDB19Q12502 818 aa10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms