RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C MTC1P47018 478 aaKnown RBP14.82□□□□□ -0.04
RPB7YDR404C DRS1P32892 752 aaKnown RBP14.26□□□□□ -0.13
RPB7YDR404C FAP1P53971 965 aa13.03□□□□□ -0.32
RPB7YDR404C DIP2Q12220 943 aaPredicted RBP12.34□□□□□ -0.43
RPB7YDR404C ISW2Q08773 1120 aa12.27□□□□□ -0.45
RPB7YDR404C PRI1P10363 409 aa12.26□□□□□ -0.45
RPB7YDR404C PRY3P47033 881 aa12.18□□□□□ -0.46
RPB7YDR404C AAD16Q02895 342 aa12.17□□□□□ -0.46
RPB7YDR404C RPG1P38249 964 aaKnown RBP12.08□□□□□ -0.48
RPB7YDR404C BFR2Q06631 534 aaKnown RBP12.05□□□□□ -0.48
RPB7YDR404C AVT3P36062 692 aa11.94□□□□□ -0.5
RPB7YDR404C RSE1Q04693 1361 aaKnown RBP11.85□□□□□ -0.51
RPB7YDR404C TSR3Q12094 313 aaKnown RBP11.64□□□□□ -0.55
RPB7YDR404C RPL17AP05740 184 aaKnown RBP11.44□□□□□ -0.58
RPB7YDR404C RPL17BP46990 184 aaKnown RBP11.44□□□□□ -0.58
RPB7YDR404C HAA1Q12753 694 aaKnown RBP11.44□□□□□ -0.58
RPB7YDR404C REB1P21538 810 aa11.42□□□□□ -0.58
RPB7YDR404C YCK3P39962 524 aa11.31□□□□□ -0.6
RPB7YDR404C MRPL32P25348 183 aa11.23□□□□□ -0.61
RPB7YDR404C TFA1P36100 482 aa10.93□□□□□ -0.66
RPB7YDR404C SPT21P35209 758 aa10.89□□□□□ -0.67
RPB7YDR404C YKR023WP36119 530 aaKnown RBP10.69□□□□□ -0.7
RPB7YDR404C YGL015CP33199 130 aa10.65□□□□□ -0.7
RPB7YDR404C CDC27P38042 758 aa10.63□□□□□ -0.71
RPB7YDR404C RIM101P33400 625 aa10.61□□□□□ -0.71
RPB7YDR404C HOP09932 586 aa10.52□□□□□ -0.73
RPB7YDR404C TFC8Q12308 588 aa10.5□□□□□ -0.73
RPB7YDR404C DCD1P06773 312 aa10.46□□□□□ -0.73
RPB7YDR404C UBP10P53874 792 aaPredicted RBP10.36□□□□□ -0.75
RPB7YDR404C MAP2P38174 421 aaKnown RBP10.3□□□□□ -0.76
RPB7YDR404C OXP1P28273 1286 aa10.24□□□□□ -0.77
RPB7YDR404C YIL055CP40523 627 aaKnown RBP10.24□□□□□ -0.77
RPB7YDR404C PTP3P40048 928 aa10.21□□□□□ -0.77
RPB7YDR404C SCY1P53009 804 aa10.19□□□□□ -0.78
RPB7YDR404C BCH2P36122 765 aa10.16□□□□□ -0.78
RPB7YDR404C YAH1Q12184 172 aaKnown RBP10.1□□□□□ -0.79
RPB7YDR404C SLX5P32828 619 aaKnown RBP10.06□□□□□ -0.8
RPB7YDR404C RSM7P47150 247 aa10.01□□□□□ -0.81
RPB7YDR404C TIF4632P39936 914 aaKnown RBP9.99□□□□□ -0.81
RPB7YDR404C EPS1P40557 701 aa9.97□□□□□ -0.81
RPB7YDR404C BBC1P47068 1157 aa9.94□□□□□ -0.82
RPB7YDR404C BDF1P35817 686 aa9.9□□□□□ -0.82
RPB7YDR404C AI2P03876 854 aa9.89□□□□□ -0.83
RPB7YDR404C SSP1P38871 571 aa9.89□□□□□ -0.83
RPB7YDR404C YLR271WQ06152 274 aa9.87□□□□□ -0.83
RPB7YDR404C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
RPB7YDR404C TGL3P40308 642 aa9.86□□□□□ -0.83
RPB7YDR404C RQC2Q12532 1038 aaKnown RBP9.72□□□□□ -0.85
RPB7YDR404C PSD2P53037 1138 aaKnown RBP9.67□□□□□ -0.86
RPB7YDR404C MGA2P40578 1113 aa9.61□□□□□ -0.87
RPB7YDR404C MRM1P25270 412 aa9.57□□□□□ -0.88
RPB7YDR404C BUD31P25337 157 aaPredicted RBP9.55□□□□□ -0.88
RPB7YDR404C CST9Q06032 482 aa9.54□□□□□ -0.88
RPB7YDR404C NSR1P27476 414 aaKnown RBP RIP-Chip data9.52□□□□□ -0.89not detected
RPB7YDR404C UBP9P39967 754 aa9.52□□□□□ -0.89
RPB7YDR404C YOR238WQ08634 303 aa9.52□□□□□ -0.89
RPB7YDR404C YAP5P40574 245 aa9.51□□□□□ -0.89
RPB7YDR404C MST1P07236 462 aa9.42□□□□□ -0.9
RPB7YDR404C RTG3P38165 486 aa9.4□□□□□ -0.9
RPB7YDR404C GTT3P39996 337 aa9.36□□□□□ -0.91
RPB7YDR404C PIB1Q06651 286 aa9.33□□□□□ -0.92
RPB7YDR404C YMR1P47147 688 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
RPB7YDR404C YBL029C-AQ3E756 94 aa9.29□□□□□ -0.92
RPB7YDR404C RCR1P38212 213 aa9.27□□□□□ -0.93
RPB7YDR404C VPS29P38759 282 aa9.27□□□□□ -0.93
RPB7YDR404C DBP1P24784 617 aaKnown RBP9.25□□□□□ -0.93
RPB7YDR404C WSC3Q12215 556 aa9.25□□□□□ -0.93
RPB7YDR404C YFR006WP43590 535 aa9.23□□□□□ -0.93
RPB7YDR404C SIS1P25294 352 aaKnown RBP9.21□□□□□ -0.94
RPB7YDR404C DMA1P38823 416 aa9.2□□□□□ -0.94
RPB7YDR404C VNX1P42839 908 aa9.19□□□□□ -0.94
RPB7YDR404C STS1P38637 319 aa9.18□□□□□ -0.94
RPB7YDR404C SPP1Q03012 353 aa9.17□□□□□ -0.94
RPB7YDR404C VMA1P17255 1071 aaKnown RBP9.11□□□□□ -0.95
RPB7YDR404C RAM2P29703 316 aa9.09□□□□□ -0.95
RPB7YDR404C TIF11P38912 153 aaKnown RBP9.09□□□□□ -0.95
RPB7YDR404C MSB4Q12317 492 aa9.08□□□□□ -0.96
RPB7YDR404C MAK11P20484 414 aaKnown RBP9.06□□□□□ -0.96
RPB7YDR404C SET4P42948 560 aa9.06□□□□□ -0.96
RPB7YDR404C YOL036WQ08206 761 aa9.05□□□□□ -0.96
RPB7YDR404C EAP1P36041 632 aaKnown RBP9.03□□□□□ -0.96
RPB7YDR404C MIF2P35201 549 aa9.02□□□□□ -0.97
RPB7YDR404C ULI1P43604 169 aa9.02□□□□□ -0.97
RPB7YDR404C SAM3Q08986 587 aa9□□□□□ -0.97
RPB7YDR404C GYP5Q12344 894 aa8.96□□□□□ -0.98
RPB7YDR404C LDB19Q12502 818 aa8.96□□□□□ -0.98
RPB7YDR404C ABP1P15891 592 aaKnown RBP8.95□□□□□ -0.98
RPB7YDR404C COQ8P27697 501 aa8.93□□□□□ -0.98
RPB7YDR404C TRP5P00931 707 aaKnown RBP8.92□□□□□ -0.98
RPB7YDR404C IOC2Q12072 812 aa8.91□□□□□ -0.98
RPB7YDR404C GRE2Q12068 342 aaKnown RBP8.9□□□□□ -0.98
RPB7YDR404C HTA1P04911 132 aaKnown RBP8.89□□□□□ -0.99
RPB7YDR404C HTA2P04912 132 aa8.89□□□□□ -0.99
RPB7YDR404C DCW1P36091 449 aa8.89□□□□□ -0.99
RPB7YDR404C EDS1P38073 919 aa8.88□□□□□ -0.99
RPB7YDR404C ATH1P48016 1211 aa8.88□□□□□ -0.99
RPB7YDR404C PTC3P34221 468 aaKnown RBP8.87□□□□□ -0.99
RPB7YDR404C FKH1P40466 484 aa8.86□□□□□ -0.99
RPB7YDR404C RTG1P32607 177 aa8.85□□□□□ -0.99
RPB7YDR404C YJL171CP46992 396 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms