RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeastyeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP4YDR354W MTC1P47018 478 aaKnown RBP17.66■□□□□ 0.42
TRP4YDR354W DRS1P32892 752 aaKnown RBP17.22■□□□□ 0.35
TRP4YDR354W FAP1P53971 965 aa15.14■□□□□ 0.01
TRP4YDR354W DIP2Q12220 943 aaPredicted RBP14.84□□□□□ -0.03
TRP4YDR354W BFR2Q06631 534 aaKnown RBP14.65□□□□□ -0.06
TRP4YDR354W PRI1P10363 409 aa14.49□□□□□ -0.09
TRP4YDR354W AVT3P36062 692 aa14.47□□□□□ -0.09
TRP4YDR354W ISW2Q08773 1120 aa14.47□□□□□ -0.09
TRP4YDR354W RPG1P38249 964 aaKnown RBP14.33□□□□□ -0.12
TRP4YDR354W AAD16Q02895 342 aa14.32□□□□□ -0.12
TRP4YDR354W PRY3P47033 881 aa14.21□□□□□ -0.13
TRP4YDR354W RSE1Q04693 1361 aaKnown RBP14.13□□□□□ -0.15
TRP4YDR354W TSR3Q12094 313 aaKnown RBP13.79□□□□□ -0.2
TRP4YDR354W RPL17AP05740 184 aaKnown RBP13.67□□□□□ -0.22
TRP4YDR354W RPL17BP46990 184 aaKnown RBP13.67□□□□□ -0.22
TRP4YDR354W REB1P21538 810 aa13.53□□□□□ -0.24
TRP4YDR354W YCK3P39962 524 aa13.43□□□□□ -0.26
TRP4YDR354W TFA1P36100 482 aa13.37□□□□□ -0.27
TRP4YDR354W HAA1Q12753 694 aaKnown RBP13.31□□□□□ -0.28
TRP4YDR354W MRPL32P25348 183 aa13.2□□□□□ -0.3
TRP4YDR354W SPT21P35209 758 aa13.1□□□□□ -0.31
TRP4YDR354W YKR023WP36119 530 aaKnown RBP12.81□□□□□ -0.36
TRP4YDR354W RIM101P33400 625 aa12.79□□□□□ -0.36
TRP4YDR354W CDC27P38042 758 aa12.7□□□□□ -0.38
TRP4YDR354W HOP09932 586 aa12.59□□□□□ -0.39
TRP4YDR354W TFC8Q12308 588 aa12.55□□□□□ -0.4
TRP4YDR354W DCD1P06773 312 aa12.52□□□□□ -0.41
TRP4YDR354W YGL015CP33199 130 aa12.44□□□□□ -0.42
TRP4YDR354W OXP1P28273 1286 aa12.42□□□□□ -0.42
TRP4YDR354W YIL055CP40523 627 aaKnown RBP12.22□□□□□ -0.45
TRP4YDR354W MAP2P38174 421 aaKnown RBP12.21□□□□□ -0.45
TRP4YDR354W PTP3P40048 928 aa12.2□□□□□ -0.46
TRP4YDR354W UBP10P53874 792 aaPredicted RBP12.18□□□□□ -0.46
TRP4YDR354W YAH1Q12184 172 aaKnown RBP12.18□□□□□ -0.46
TRP4YDR354W BCH2P36122 765 aa12.17□□□□□ -0.46
TRP4YDR354W SCY1P53009 804 aa12.1□□□□□ -0.47
TRP4YDR354W RSM7P47150 247 aa12.03□□□□□ -0.48
TRP4YDR354W SSP1P38871 571 aa11.99□□□□□ -0.49
TRP4YDR354W YLR271WQ06152 274 aa11.98□□□□□ -0.49
TRP4YDR354W EPS1P40557 701 aa11.92□□□□□ -0.5
TRP4YDR354W AI2P03876 854 aa11.87□□□□□ -0.51
TRP4YDR354W SLX5P32828 619 aaKnown RBP11.87□□□□□ -0.51
TRP4YDR354W BDF1P35817 686 aa11.85□□□□□ -0.51
TRP4YDR354W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
TRP4YDR354W BBC1P47068 1157 aa11.81□□□□□ -0.52
TRP4YDR354W PSD2P53037 1138 aaKnown RBP11.7□□□□□ -0.54
TRP4YDR354W TIF4632P39936 914 aaKnown RBP11.68□□□□□ -0.54
TRP4YDR354W TGL3P40308 642 aa11.61□□□□□ -0.55
TRP4YDR354W MGA2P40578 1113 aa11.61□□□□□ -0.55
TRP4YDR354W CST9Q06032 482 aa11.6□□□□□ -0.55
TRP4YDR354W MRM1P25270 412 aa11.5□□□□□ -0.57
TRP4YDR354W NSR1P27476 414 aaKnown RBP RIP-Chip data11.27□□□□□ -0.61not detected
TRP4YDR354W RTG3P38165 486 aa11.27□□□□□ -0.61
TRP4YDR354W RCR1P38212 213 aa11.26□□□□□ -0.61
TRP4YDR354W YAP5P40574 245 aa11.26□□□□□ -0.61
TRP4YDR354W YOR238WQ08634 303 aa11.24□□□□□ -0.61
TRP4YDR354W VPS29P38759 282 aa11.21□□□□□ -0.61
TRP4YDR354W MST1P07236 462 aa11.19□□□□□ -0.62
TRP4YDR354W PIB1Q06651 286 aa11.16□□□□□ -0.62
TRP4YDR354W YMR1P47147 688 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
TRP4YDR354W YFR006WP43590 535 aa11.1□□□□□ -0.63
TRP4YDR354W DBP1P24784 617 aaKnown RBP11.09□□□□□ -0.63
TRP4YDR354W RAM2P29703 316 aa11.09□□□□□ -0.63
TRP4YDR354W BUD31P25337 157 aaPredicted RBP11.08□□□□□ -0.64
TRP4YDR354W STS1P38637 319 aa11.08□□□□□ -0.64
TRP4YDR354W UBP9P39967 754 aa11.04□□□□□ -0.64
TRP4YDR354W GTT3P39996 337 aa11□□□□□ -0.65
TRP4YDR354W YBL029C-AQ3E756 94 aa10.96□□□□□ -0.65
TRP4YDR354W WSC3Q12215 556 aa10.94□□□□□ -0.66
TRP4YDR354W MAK11P20484 414 aaKnown RBP10.93□□□□□ -0.66
TRP4YDR354W VMA1P17255 1071 aaKnown RBP10.91□□□□□ -0.66
TRP4YDR354W VNX1P42839 908 aa10.86□□□□□ -0.67
TRP4YDR354W DMA1P38823 416 aa10.85□□□□□ -0.67
TRP4YDR354W MIF2P35201 549 aa10.83□□□□□ -0.68
TRP4YDR354W COQ8P27697 501 aa10.81□□□□□ -0.68
TRP4YDR354W EDS1P38073 919 aa10.79□□□□□ -0.68
TRP4YDR354W SAM3Q08986 587 aa10.79□□□□□ -0.68
TRP4YDR354W SET4P42948 560 aa10.78□□□□□ -0.68
TRP4YDR354W YOL036WQ08206 761 aa10.78□□□□□ -0.68
TRP4YDR354W SPP1Q03012 353 aa10.77□□□□□ -0.69
TRP4YDR354W SET1P38827 1080 aaKnown RBP10.71□□□□□ -0.69
TRP4YDR354W TIF11P38912 153 aaKnown RBP10.71□□□□□ -0.69
TRP4YDR354W MSB4Q12317 492 aa10.71□□□□□ -0.69
TRP4YDR354W PTC3P34221 468 aaKnown RBP10.7□□□□□ -0.7
TRP4YDR354W GYP5Q12344 894 aa10.7□□□□□ -0.7
TRP4YDR354W RQC2Q12532 1038 aaKnown RBP10.68□□□□□ -0.7
TRP4YDR354W ULI1P43604 169 aa10.66□□□□□ -0.7
TRP4YDR354W SIS1P25294 352 aaKnown RBP10.65□□□□□ -0.7
TRP4YDR354W GRE2Q12068 342 aaKnown RBP10.65□□□□□ -0.7
TRP4YDR354W EAP1P36041 632 aaKnown RBP10.62□□□□□ -0.71
TRP4YDR354W DCW1P36091 449 aa10.62□□□□□ -0.71
TRP4YDR354W TRP5P00931 707 aaKnown RBP10.61□□□□□ -0.71
TRP4YDR354W ATH1P48016 1211 aa10.6□□□□□ -0.71
TRP4YDR354W IOC2Q12072 812 aa10.6□□□□□ -0.71
TRP4YDR354W NOP53Q12080 455 aaKnown RBP10.6□□□□□ -0.71
TRP4YDR354W ABP1P15891 592 aaKnown RBP10.57□□□□□ -0.72
TRP4YDR354W GUT1P32190 709 aa10.56□□□□□ -0.72
TRP4YDR354W LDB19Q12502 818 aa10.56□□□□□ -0.72
TRP4YDR354W HTA1P04911 132 aaKnown RBP10.55□□□□□ -0.72
TRP4YDR354W HTA2P04912 132 aa10.55□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms