RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeastyeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIM1YDR317W MTC1P47018 478 aaKnown RBP16.13■□□□□ 0.17
HIM1YDR317W DRS1P32892 752 aaKnown RBP15.7■□□□□ 0.1
HIM1YDR317W FAP1P53971 965 aa13.94□□□□□ -0.18
HIM1YDR317W DIP2Q12220 943 aaPredicted RBP13.52□□□□□ -0.25
HIM1YDR317W BFR2Q06631 534 aaKnown RBP13.33□□□□□ -0.28
HIM1YDR317W PRI1P10363 409 aa13.27□□□□□ -0.29
HIM1YDR317W AVT3P36062 692 aa13.24□□□□□ -0.29
HIM1YDR317W ISW2Q08773 1120 aa13.16□□□□□ -0.3
HIM1YDR317W PRY3P47033 881 aa13.11□□□□□ -0.31
HIM1YDR317W AAD16Q02895 342 aa13.11□□□□□ -0.31
HIM1YDR317W RPG1P38249 964 aaKnown RBP13.09□□□□□ -0.31
HIM1YDR317W RSE1Q04693 1361 aaKnown RBP12.87□□□□□ -0.35
HIM1YDR317W TSR3Q12094 313 aaKnown RBP12.62□□□□□ -0.39
HIM1YDR317W YCK3P39962 524 aa12.49□□□□□ -0.41
HIM1YDR317W RPL17AP05740 184 aaKnown RBP12.48□□□□□ -0.41
HIM1YDR317W RPL17BP46990 184 aaKnown RBP12.48□□□□□ -0.41
HIM1YDR317W REB1P21538 810 aa12.31□□□□□ -0.44
HIM1YDR317W HAA1Q12753 694 aaKnown RBP12.28□□□□□ -0.44
HIM1YDR317W TFA1P36100 482 aa12.17□□□□□ -0.46
HIM1YDR317W MRPL32P25348 183 aa12.02□□□□□ -0.49
HIM1YDR317W SPT21P35209 758 aa12.02□□□□□ -0.49
HIM1YDR317W YKR023WP36119 530 aaKnown RBP11.75□□□□□ -0.53
HIM1YDR317W RIM101P33400 625 aa11.68□□□□□ -0.54
HIM1YDR317W CDC27P38042 758 aa11.65□□□□□ -0.54
HIM1YDR317W HOP09932 586 aa11.53□□□□□ -0.56
HIM1YDR317W DCD1P06773 312 aa11.51□□□□□ -0.57
HIM1YDR317W TFC8Q12308 588 aa11.47□□□□□ -0.57
HIM1YDR317W YGL015CP33199 130 aa11.42□□□□□ -0.58
HIM1YDR317W OXP1P28273 1286 aa11.38□□□□□ -0.59
HIM1YDR317W MAP2P38174 421 aaKnown RBP11.19□□□□□ -0.62
HIM1YDR317W BCH2P36122 765 aa11.14□□□□□ -0.63
HIM1YDR317W YAH1Q12184 172 aaKnown RBP11.13□□□□□ -0.63
HIM1YDR317W PTP3P40048 928 aa11.1□□□□□ -0.63
HIM1YDR317W UBP10P53874 792 aaPredicted RBP11.1□□□□□ -0.63
HIM1YDR317W YIL055CP40523 627 aaKnown RBP11.08□□□□□ -0.64
HIM1YDR317W SCY1P53009 804 aa11.06□□□□□ -0.64
HIM1YDR317W RSM7P47150 247 aa10.96□□□□□ -0.65
HIM1YDR317W YLR271WQ06152 274 aa10.95□□□□□ -0.66
HIM1YDR317W SSP1P38871 571 aa10.9□□□□□ -0.66
HIM1YDR317W EPS1P40557 701 aa10.9□□□□□ -0.66
HIM1YDR317W AI2P03876 854 aa10.83□□□□□ -0.68
HIM1YDR317W BDF1P35817 686 aa10.83□□□□□ -0.68
HIM1YDR317W SLX5P32828 619 aaKnown RBP10.81□□□□□ -0.68
HIM1YDR317W BBC1P47068 1157 aa10.71□□□□□ -0.69
HIM1YDR317W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69 RIP-Chip
HIM1YDR317W PSD2P53037 1138 aaKnown RBP10.7□□□□□ -0.7
HIM1YDR317W CST9Q06032 482 aa10.63□□□□□ -0.71
HIM1YDR317W TIF4632P39936 914 aaKnown RBP10.62□□□□□ -0.71
HIM1YDR317W TGL3P40308 642 aa10.6□□□□□ -0.71
HIM1YDR317W MGA2P40578 1113 aa10.55□□□□□ -0.72
HIM1YDR317W BUD31P25337 157 aaPredicted RBP10.54□□□□□ -0.72
HIM1YDR317W MRM1P25270 412 aa10.5□□□□□ -0.73
HIM1YDR317W RCR1P38212 213 aa10.36□□□□□ -0.75
HIM1YDR317W NSR1P27476 414 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
HIM1YDR317W VPS29P38759 282 aa10.25□□□□□ -0.77
HIM1YDR317W RTG3P38165 486 aa10.24□□□□□ -0.77
HIM1YDR317W YAP5P40574 245 aa10.23□□□□□ -0.77
HIM1YDR317W PIB1Q06651 286 aa10.23□□□□□ -0.77
HIM1YDR317W MST1P07236 462 aa10.22□□□□□ -0.77
HIM1YDR317W YOR238WQ08634 303 aa10.2□□□□□ -0.78
HIM1YDR317W STS1P38637 319 aa10.16□□□□□ -0.78
HIM1YDR317W YFR006WP43590 535 aa10.16□□□□□ -0.78
HIM1YDR317W RAM2P29703 316 aa10.14□□□□□ -0.79
HIM1YDR317W YMR1P47147 688 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
HIM1YDR317W UBP9P39967 754 aa10.12□□□□□ -0.79
HIM1YDR317W DBP1P24784 617 aaKnown RBP10.11□□□□□ -0.79
HIM1YDR317W YBL029C-AQ3E756 94 aa10.03□□□□□ -0.8
HIM1YDR317W WSC3Q12215 556 aa9.98□□□□□ -0.81
HIM1YDR317W GTT3P39996 337 aa9.97□□□□□ -0.81
HIM1YDR317W VMA1P17255 1071 aaKnown RBP9.95□□□□□ -0.82
HIM1YDR317W MAK11P20484 414 aaKnown RBP9.94□□□□□ -0.82
HIM1YDR317W VNX1P42839 908 aa9.92□□□□□ -0.82
HIM1YDR317W EDS1P38073 919 aa9.89□□□□□ -0.83
HIM1YDR317W DMA1P38823 416 aa9.87□□□□□ -0.83
HIM1YDR317W SIS1P25294 352 aaKnown RBP9.86□□□□□ -0.83
HIM1YDR317W COQ8P27697 501 aa9.85□□□□□ -0.83
HIM1YDR317W MIF2P35201 549 aa9.85□□□□□ -0.83
HIM1YDR317W YOL036WQ08206 761 aa9.84□□□□□ -0.83
HIM1YDR317W SET4P42948 560 aa9.83□□□□□ -0.84
HIM1YDR317W SAM3Q08986 587 aa9.83□□□□□ -0.84
HIM1YDR317W SPP1Q03012 353 aa9.8□□□□□ -0.84
HIM1YDR317W PTC3P34221 468 aaKnown RBP9.76□□□□□ -0.85
HIM1YDR317W TIF11P38912 153 aaKnown RBP9.76□□□□□ -0.85
HIM1YDR317W SET1P38827 1080 aaKnown RBP9.73□□□□□ -0.85
HIM1YDR317W GYP5Q12344 894 aa9.73□□□□□ -0.85
HIM1YDR317W MSB4Q12317 492 aa9.72□□□□□ -0.85
HIM1YDR317W ULI1P43604 169 aa9.7□□□□□ -0.86
HIM1YDR317W DCW1P36091 449 aa9.68□□□□□ -0.86
HIM1YDR317W IOC2Q12072 812 aa9.68□□□□□ -0.86
HIM1YDR317W TRP5P00931 707 aaKnown RBP9.67□□□□□ -0.86
HIM1YDR317W GRE2Q12068 342 aaKnown RBP9.67□□□□□ -0.86
HIM1YDR317W LDB19Q12502 818 aa9.64□□□□□ -0.87
HIM1YDR317W ATH1P48016 1211 aa9.63□□□□□ -0.87
HIM1YDR317W EAP1P36041 632 aaKnown RBP9.61□□□□□ -0.87
HIM1YDR317W GUT1P32190 709 aa9.59□□□□□ -0.87
HIM1YDR317W SOL3P38858 249 aa9.59□□□□□ -0.87
HIM1YDR317W HTA1P04911 132 aaKnown RBP9.58□□□□□ -0.88
HIM1YDR317W HTA2P04912 132 aa9.58□□□□□ -0.88
HIM1YDR317W FKH1P40466 484 aa9.57□□□□□ -0.88
HIM1YDR317W NOP53Q12080 455 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms