RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB7, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB7YDR308C MTC1P47018 478 aaKnown RBP13.41□□□□□ -0.26
SRB7YDR308C DRS1P32892 752 aaKnown RBP13.38□□□□□ -0.27
SRB7YDR308C BFR2Q06631 534 aaKnown RBP11.52□□□□□ -0.57
SRB7YDR308C DIP2Q12220 943 aaPredicted RBP11.41□□□□□ -0.58
SRB7YDR308C FAP1P53971 965 aa11.37□□□□□ -0.59
SRB7YDR308C AVT3P36062 692 aa11.12□□□□□ -0.63
SRB7YDR308C ISW2Q08773 1120 aa11.02□□□□□ -0.65
SRB7YDR308C RPG1P38249 964 aaKnown RBP10.86□□□□□ -0.67
SRB7YDR308C PRI1P10363 409 aa10.84□□□□□ -0.67
SRB7YDR308C RSE1Q04693 1361 aaKnown RBP10.84□□□□□ -0.67
SRB7YDR308C AAD16Q02895 342 aa10.72□□□□□ -0.69
SRB7YDR308C PRY3P47033 881 aa10.6□□□□□ -0.71
SRB7YDR308C TFA1P36100 482 aa10.58□□□□□ -0.72
SRB7YDR308C RPL17AP05740 184 aaKnown RBP10.46□□□□□ -0.73
SRB7YDR308C RPL17BP46990 184 aaKnown RBP10.46□□□□□ -0.73
SRB7YDR308C REB1P21538 810 aa10.41□□□□□ -0.74
SRB7YDR308C TSR3Q12094 313 aaKnown RBP10.36□□□□□ -0.75
SRB7YDR308C MRPL32P25348 183 aa9.99□□□□□ -0.81
SRB7YDR308C SPT21P35209 758 aa9.92□□□□□ -0.82
SRB7YDR308C HAA1Q12753 694 aaKnown RBP9.92□□□□□ -0.82
SRB7YDR308C YCK3P39962 524 aa9.79□□□□□ -0.84
SRB7YDR308C RIM101P33400 625 aa9.77□□□□□ -0.85
SRB7YDR308C YKR023WP36119 530 aaKnown RBP9.66□□□□□ -0.86
SRB7YDR308C HOP09932 586 aa9.56□□□□□ -0.88
SRB7YDR308C CDC27P38042 758 aa9.52□□□□□ -0.89
SRB7YDR308C DCD1P06773 312 aa9.5□□□□□ -0.89
SRB7YDR308C PTP3P40048 928 aa9.49□□□□□ -0.89
SRB7YDR308C YIL055CP40523 627 aaKnown RBP9.49□□□□□ -0.89
SRB7YDR308C TFC8Q12308 588 aa9.49□□□□□ -0.89
SRB7YDR308C OXP1P28273 1286 aa9.46□□□□□ -0.9
SRB7YDR308C YAH1Q12184 172 aaKnown RBP9.46□□□□□ -0.9
SRB7YDR308C SSP1P38871 571 aa9.33□□□□□ -0.92
SRB7YDR308C YGL015CP33199 130 aa9.32□□□□□ -0.92
SRB7YDR308C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
SRB7YDR308C RSM7P47150 247 aa9.25□□□□□ -0.93
SRB7YDR308C BCH2P36122 765 aa9.21□□□□□ -0.94
SRB7YDR308C YLR271WQ06152 274 aa9.2□□□□□ -0.94
SRB7YDR308C MAP2P38174 421 aaKnown RBP9.18□□□□□ -0.94
SRB7YDR308C UBP10P53874 792 aaPredicted RBP9.18□□□□□ -0.94
SRB7YDR308C SCY1P53009 804 aa9.17□□□□□ -0.94
SRB7YDR308C BBC1P47068 1157 aa9.13□□□□□ -0.95
SRB7YDR308C AI2P03876 854 aa9.12□□□□□ -0.95
SRB7YDR308C EPS1P40557 701 aa9.08□□□□□ -0.96
SRB7YDR308C SLX5P32828 619 aaKnown RBP9.01□□□□□ -0.97
SRB7YDR308C BDF1P35817 686 aa9□□□□□ -0.97
SRB7YDR308C MGA2P40578 1113 aa9□□□□□ -0.97
SRB7YDR308C PSD2P53037 1138 aaKnown RBP8.94□□□□□ -0.98
SRB7YDR308C RQC2Q12532 1038 aaKnown RBP8.94□□□□□ -0.98
SRB7YDR308C CST9Q06032 482 aa8.93□□□□□ -0.98
SRB7YDR308C TIF4632P39936 914 aaKnown RBP8.88□□□□□ -0.99
SRB7YDR308C MRM1P25270 412 aa8.85□□□□□ -0.99
SRB7YDR308C DMA1P38823 416 aa8.73□□□□□ -1.01
SRB7YDR308C TGL3P40308 642 aa8.73□□□□□ -1.01
SRB7YDR308C RTG3P38165 486 aa8.7□□□□□ -1.02
SRB7YDR308C RCR1P38212 213 aa8.63□□□□□ -1.03
SRB7YDR308C YAP5P40574 245 aa8.58□□□□□ -1.04
SRB7YDR308C YMR1P47147 688 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
SRB7YDR308C YOR238WQ08634 303 aa8.55□□□□□ -1.04
SRB7YDR308C RAM2P29703 316 aa8.54□□□□□ -1.04
SRB7YDR308C VPS29P38759 282 aa8.54□□□□□ -1.04
SRB7YDR308C PIB1Q06651 286 aa8.54□□□□□ -1.04
SRB7YDR308C NSR1P27476 414 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
SRB7YDR308C YFR006WP43590 535 aa8.51□□□□□ -1.05
SRB7YDR308C DBP1P24784 617 aaKnown RBP8.5□□□□□ -1.05
SRB7YDR308C MAK11P20484 414 aaKnown RBP8.46□□□□□ -1.06
SRB7YDR308C GTT3P39996 337 aa8.46□□□□□ -1.06
SRB7YDR308C STS1P38637 319 aa8.45□□□□□ -1.06
SRB7YDR308C MIF2P35201 549 aa8.42□□□□□ -1.06
SRB7YDR308C SET1P38827 1080 aaKnown RBP8.38□□□□□ -1.07
SRB7YDR308C MST1P07236 462 aa8.36□□□□□ -1.07
SRB7YDR308C COQ8P27697 501 aa8.35□□□□□ -1.07
SRB7YDR308C VMA1P17255 1071 aaKnown RBP8.32□□□□□ -1.08
SRB7YDR308C UBP9P39967 754 aa8.32□□□□□ -1.08
SRB7YDR308C WSC3Q12215 556 aa8.32□□□□□ -1.08
SRB7YDR308C EDS1P38073 919 aa8.26□□□□□ -1.09
SRB7YDR308C YBL029C-AQ3E756 94 aa8.25□□□□□ -1.09
SRB7YDR308C IFH1P39520 1085 aa8.24□□□□□ -1.09
SRB7YDR308C PTC3P34221 468 aaKnown RBP8.23□□□□□ -1.09
SRB7YDR308C SET4P42948 560 aa8.23□□□□□ -1.09
SRB7YDR308C ATH1P48016 1211 aa8.22□□□□□ -1.09
SRB7YDR308C VPS70P47161 811 aa8.21□□□□□ -1.1
SRB7YDR308C YOL036WQ08206 761 aa8.21□□□□□ -1.1
SRB7YDR308C GRE2Q12068 342 aaKnown RBP8.21□□□□□ -1.1
SRB7YDR308C GYP5Q12344 894 aa8.21□□□□□ -1.1
SRB7YDR308C NOP53Q12080 455 aaKnown RBP8.19□□□□□ -1.1
SRB7YDR308C SAM3Q08986 587 aa8.18□□□□□ -1.1
SRB7YDR308C SAS10Q12136 610 aaPredicted RBP8.18□□□□□ -1.1
SRB7YDR308C DCW1P36091 449 aa8.16□□□□□ -1.1
SRB7YDR308C SPP1Q03012 353 aa8.16□□□□□ -1.1
SRB7YDR308C MSB4Q12317 492 aa8.16□□□□□ -1.1
SRB7YDR308C VNX1P42839 908 aa8.15□□□□□ -1.1
SRB7YDR308C BUD31P25337 157 aaPredicted RBP8.14□□□□□ -1.11
SRB7YDR308C ABP1P15891 592 aaKnown RBP8.13□□□□□ -1.11
SRB7YDR308C GUT1P32190 709 aa8.13□□□□□ -1.11
SRB7YDR308C YPR148CQ06523 435 aa8.13□□□□□ -1.11
SRB7YDR308C EAP1P36041 632 aaKnown RBP8.12□□□□□ -1.11
SRB7YDR308C HTA1P04911 132 aaKnown RBP8.11□□□□□ -1.11
SRB7YDR308C HTA2P04912 132 aa8.11□□□□□ -1.11
SRB7YDR308C TIF11P38912 153 aaKnown RBP8.1□□□□□ -1.11
SRB7YDR308C CKB1P43639 278 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms