RNA–Protein interactions for RNA: YDR255C

RMD5, Transcript of Component of GID Complex that confers ubiquitin ligase (U3) activity, yeastyeast

Gene RMD5, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RMD5YDR255C MTC1P47018 478 aaKnown RBP17.73■□□□□ 0.43
RMD5YDR255C DRS1P32892 752 aaKnown RBP16.95■□□□□ 0.3
RMD5YDR255C FAP1P53971 965 aa15.71■□□□□ 0.11
RMD5YDR255C PRI1P10363 409 aa14.77□□□□□ -0.05
RMD5YDR255C DIP2Q12220 943 aaPredicted RBP14.74□□□□□ -0.05
RMD5YDR255C PRY3P47033 881 aa14.73□□□□□ -0.05
RMD5YDR255C AAD16Q02895 342 aa14.66□□□□□ -0.06
RMD5YDR255C ISW2Q08773 1120 aa14.65□□□□□ -0.06
RMD5YDR255C RPG1P38249 964 aaKnown RBP14.53□□□□□ -0.08
RMD5YDR255C BFR2Q06631 534 aaKnown RBP14.26□□□□□ -0.13
RMD5YDR255C AVT3P36062 692 aa14.24□□□□□ -0.13
RMD5YDR255C RSE1Q04693 1361 aaKnown RBP14.13□□□□□ -0.15
RMD5YDR255C TSR3Q12094 313 aaKnown RBP14.05□□□□□ -0.16
RMD5YDR255C YCK3P39962 524 aa13.84□□□□□ -0.19
RMD5YDR255C HAA1Q12753 694 aaKnown RBP13.77□□□□□ -0.21
RMD5YDR255C RPL17AP05740 184 aaKnown RBP13.7□□□□□ -0.22
RMD5YDR255C RPL17BP46990 184 aaKnown RBP13.7□□□□□ -0.22
RMD5YDR255C REB1P21538 810 aa13.62□□□□□ -0.23
RMD5YDR255C MRPL32P25348 183 aa13.48□□□□□ -0.25
RMD5YDR255C TFA1P36100 482 aa13.25□□□□□ -0.29
RMD5YDR255C SPT21P35209 758 aa13.04□□□□□ -0.32
RMD5YDR255C YKR023WP36119 530 aaKnown RBP12.87□□□□□ -0.35
RMD5YDR255C CDC27P38042 758 aa12.84□□□□□ -0.35
RMD5YDR255C YGL015CP33199 130 aa12.81□□□□□ -0.36
RMD5YDR255C RIM101P33400 625 aa12.69□□□□□ -0.38
RMD5YDR255C HOP09932 586 aa12.67□□□□□ -0.38
RMD5YDR255C DCD1P06773 312 aa12.62□□□□□ -0.39
RMD5YDR255C TFC8Q12308 588 aa12.6□□□□□ -0.39
RMD5YDR255C MAP2P38174 421 aaKnown RBP12.41□□□□□ -0.42
RMD5YDR255C UBP10P53874 792 aaPredicted RBP12.36□□□□□ -0.43
RMD5YDR255C OXP1P28273 1286 aa12.3□□□□□ -0.44
RMD5YDR255C SCY1P53009 804 aa12.24□□□□□ -0.45
RMD5YDR255C BCH2P36122 765 aa12.23□□□□□ -0.45
RMD5YDR255C YIL055CP40523 627 aaKnown RBP12.17□□□□□ -0.46
RMD5YDR255C PTP3P40048 928 aa12.14□□□□□ -0.47
RMD5YDR255C YAH1Q12184 172 aaKnown RBP12.06□□□□□ -0.48
RMD5YDR255C SLX5P32828 619 aaKnown RBP12.04□□□□□ -0.48
RMD5YDR255C EPS1P40557 701 aa11.94□□□□□ -0.5
RMD5YDR255C RSM7P47150 247 aa11.94□□□□□ -0.5
RMD5YDR255C TIF4632P39936 914 aaKnown RBP11.9□□□□□ -0.5
RMD5YDR255C BDF1P35817 686 aa11.89□□□□□ -0.51
RMD5YDR255C TGL3P40308 642 aa11.83□□□□□ -0.52
RMD5YDR255C AI2P03876 854 aa11.82□□□□□ -0.52
RMD5YDR255C YLR271WQ06152 274 aa11.8□□□□□ -0.52
RMD5YDR255C BBC1P47068 1157 aa11.79□□□□□ -0.52
RMD5YDR255C SSP1P38871 571 aa11.73□□□□□ -0.53
RMD5YDR255C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
RMD5YDR255C BUD31P25337 157 aaPredicted RBP11.55□□□□□ -0.56
RMD5YDR255C PSD2P53037 1138 aaKnown RBP11.54□□□□□ -0.56
RMD5YDR255C MRM1P25270 412 aa11.43□□□□□ -0.58
RMD5YDR255C CST9Q06032 482 aa11.41□□□□□ -0.58
RMD5YDR255C MGA2P40578 1113 aa11.4□□□□□ -0.58
RMD5YDR255C UBP9P39967 754 aa11.39□□□□□ -0.59
RMD5YDR255C YOR238WQ08634 303 aa11.38□□□□□ -0.59
RMD5YDR255C YAP5P40574 245 aa11.34□□□□□ -0.59
RMD5YDR255C MST1P07236 462 aa11.33□□□□□ -0.6
RMD5YDR255C NSR1P27476 414 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
RMD5YDR255C RQC2Q12532 1038 aaKnown RBP11.24□□□□□ -0.61
RMD5YDR255C PIB1Q06651 286 aa11.21□□□□□ -0.61
RMD5YDR255C RTG3P38165 486 aa11.18□□□□□ -0.62
RMD5YDR255C YBL029C-AQ3E756 94 aa11.18□□□□□ -0.62
RMD5YDR255C VPS29P38759 282 aa11.12□□□□□ -0.63
RMD5YDR255C WSC3Q12215 556 aa11.12□□□□□ -0.63
RMD5YDR255C RCR1P38212 213 aa11.11□□□□□ -0.63
RMD5YDR255C GTT3P39996 337 aa11.11□□□□□ -0.63
RMD5YDR255C SIS1P25294 352 aaKnown RBP11.1□□□□□ -0.63
RMD5YDR255C YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
RMD5YDR255C YFR006WP43590 535 aa11.07□□□□□ -0.64
RMD5YDR255C DBP1P24784 617 aaKnown RBP11.06□□□□□ -0.64
RMD5YDR255C VNX1P42839 908 aa11.06□□□□□ -0.64
RMD5YDR255C STS1P38637 319 aa10.99□□□□□ -0.65
RMD5YDR255C SPP1Q03012 353 aa10.99□□□□□ -0.65
RMD5YDR255C TIF11P38912 153 aaKnown RBP10.88□□□□□ -0.67
RMD5YDR255C VMA1P17255 1071 aaKnown RBP10.87□□□□□ -0.67
RMD5YDR255C RAM2P29703 316 aa10.84□□□□□ -0.67
RMD5YDR255C SET4P42948 560 aa10.84□□□□□ -0.67
RMD5YDR255C DMA1P38823 416 aa10.81□□□□□ -0.68
RMD5YDR255C ULI1P43604 169 aa10.81□□□□□ -0.68
RMD5YDR255C YOL036WQ08206 761 aa10.81□□□□□ -0.68
RMD5YDR255C MSB4Q12317 492 aa10.77□□□□□ -0.69
RMD5YDR255C SAM3Q08986 587 aa10.75□□□□□ -0.69
RMD5YDR255C MAK11P20484 414 aaKnown RBP10.74□□□□□ -0.69
RMD5YDR255C MIF2P35201 549 aa10.73□□□□□ -0.69
RMD5YDR255C IOC2Q12072 812 aa10.73□□□□□ -0.69
RMD5YDR255C LDB19Q12502 818 aa10.73□□□□□ -0.69
RMD5YDR255C EAP1P36041 632 aaKnown RBP10.72□□□□□ -0.69
RMD5YDR255C TRP5P00931 707 aaKnown RBP10.69□□□□□ -0.7
RMD5YDR255C GYP5Q12344 894 aa10.69□□□□□ -0.7
RMD5YDR255C DCW1P36091 449 aa10.63□□□□□ -0.71
RMD5YDR255C AIR2Q12476 344 aaKnown RBP10.63□□□□□ -0.71
RMD5YDR255C COQ8P27697 501 aa10.62□□□□□ -0.71
RMD5YDR255C EDS1P38073 919 aa10.62□□□□□ -0.71
RMD5YDR255C FKH1P40466 484 aa10.62□□□□□ -0.71
RMD5YDR255C RTG1P32607 177 aa10.59□□□□□ -0.71
RMD5YDR255C PTC3P34221 468 aaKnown RBP10.57□□□□□ -0.72
RMD5YDR255C YJL171CP46992 396 aa10.57□□□□□ -0.72
RMD5YDR255C GRE2Q12068 342 aaKnown RBP10.57□□□□□ -0.72
RMD5YDR255C HTA1P04911 132 aaKnown RBP10.56□□□□□ -0.72
RMD5YDR255C HTA2P04912 132 aa10.56□□□□□ -0.72
RMD5YDR255C ABP1P15891 592 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms