RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeastyeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP15YDR100W MTC1P47018 478 aaKnown RBP11.99□□□□□ -0.49
TVP15YDR100W DRS1P32892 752 aaKnown RBP11.7□□□□□ -0.54
TVP15YDR100W FAP1P53971 965 aa10.34□□□□□ -0.75
TVP15YDR100W DIP2Q12220 943 aaPredicted RBP10.08□□□□□ -0.8
TVP15YDR100W BFR2Q06631 534 aaKnown RBP9.94□□□□□ -0.82
TVP15YDR100W PRI1P10363 409 aa9.84□□□□□ -0.83
TVP15YDR100W AVT3P36062 692 aa9.83□□□□□ -0.84
TVP15YDR100W ISW2Q08773 1120 aa9.8□□□□□ -0.84
TVP15YDR100W PRY3P47033 881 aa9.78□□□□□ -0.84
TVP15YDR100W RPG1P38249 964 aaKnown RBP9.75□□□□□ -0.85
TVP15YDR100W AAD16Q02895 342 aa9.72□□□□□ -0.85
TVP15YDR100W RSE1Q04693 1361 aaKnown RBP9.58□□□□□ -0.88
TVP15YDR100W TSR3Q12094 313 aaKnown RBP9.38□□□□□ -0.91
TVP15YDR100W RPL17AP05740 184 aaKnown RBP9.29□□□□□ -0.92
TVP15YDR100W RPL17BP46990 184 aaKnown RBP9.29□□□□□ -0.92
TVP15YDR100W YCK3P39962 524 aa9.23□□□□□ -0.93
TVP15YDR100W TFA1P36100 482 aa9.21□□□□□ -0.94
TVP15YDR100W REB1P21538 810 aa9.18□□□□□ -0.94
TVP15YDR100W HAA1Q12753 694 aaKnown RBP9.02□□□□□ -0.97
TVP15YDR100W MRPL32P25348 183 aa8.95□□□□□ -0.98
TVP15YDR100W SPT21P35209 758 aa8.9□□□□□ -0.98
TVP15YDR100W YKR023WP36119 530 aaKnown RBP8.72□□□□□ -1.01
TVP15YDR100W RIM101P33400 625 aa8.69□□□□□ -1.02
TVP15YDR100W CDC27P38042 758 aa8.65□□□□□ -1.02
TVP15YDR100W HOP09932 586 aa8.58□□□□□ -1.04
TVP15YDR100W DCD1P06773 312 aa8.55□□□□□ -1.04
TVP15YDR100W TFC8Q12308 588 aa8.52□□□□□ -1.05
TVP15YDR100W OXP1P28273 1286 aa8.46□□□□□ -1.06
TVP15YDR100W YGL015CP33199 130 aa8.42□□□□□ -1.06
TVP15YDR100W MAP2P38174 421 aaKnown RBP8.31□□□□□ -1.08
TVP15YDR100W YIL055CP40523 627 aaKnown RBP8.29□□□□□ -1.08
TVP15YDR100W YAH1Q12184 172 aaKnown RBP8.29□□□□□ -1.08
TVP15YDR100W BCH2P36122 765 aa8.28□□□□□ -1.08
TVP15YDR100W PTP3P40048 928 aa8.27□□□□□ -1.09
TVP15YDR100W UBP10P53874 792 aaPredicted RBP8.24□□□□□ -1.09
TVP15YDR100W SCY1P53009 804 aa8.22□□□□□ -1.09
TVP15YDR100W RSM7P47150 247 aa8.16□□□□□ -1.1
TVP15YDR100W YLR271WQ06152 274 aa8.14□□□□□ -1.11
TVP15YDR100W SSP1P38871 571 aa8.13□□□□□ -1.11
TVP15YDR100W EPS1P40557 701 aa8.1□□□□□ -1.11
TVP15YDR100W AI2P03876 854 aa8.06□□□□□ -1.12
TVP15YDR100W SLX5P32828 619 aaKnown RBP8.05□□□□□ -1.12
TVP15YDR100W BDF1P35817 686 aa8.05□□□□□ -1.12
TVP15YDR100W BBC1P47068 1157 aa7.99□□□□□ -1.13
TVP15YDR100W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
TVP15YDR100W BUD31P25337 157 aaPredicted RBP7.96□□□□□ -1.14
TVP15YDR100W PSD2P53037 1138 aaKnown RBP7.94□□□□□ -1.14
TVP15YDR100W TIF4632P39936 914 aaKnown RBP7.9□□□□□ -1.14
TVP15YDR100W CST9Q06032 482 aa7.9□□□□□ -1.14
TVP15YDR100W RQC2Q12532 1038 aaKnown RBP7.88□□□□□ -1.15
TVP15YDR100W MGA2P40578 1113 aa7.86□□□□□ -1.15
TVP15YDR100W TGL3P40308 642 aa7.85□□□□□ -1.15
TVP15YDR100W MRM1P25270 412 aa7.82□□□□□ -1.16
TVP15YDR100W RCR1P38212 213 aa7.68□□□□□ -1.18
TVP15YDR100W DMA1P38823 416 aa7.65□□□□□ -1.18
TVP15YDR100W RTG3P38165 486 aa7.64□□□□□ -1.19
TVP15YDR100W VPS29P38759 282 aa7.62□□□□□ -1.19
TVP15YDR100W NSR1P27476 414 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
TVP15YDR100W YAP5P40574 245 aa7.61□□□□□ -1.19
TVP15YDR100W PIB1Q06651 286 aa7.61□□□□□ -1.19
TVP15YDR100W YOR238WQ08634 303 aa7.61□□□□□ -1.19
TVP15YDR100W MST1P07236 462 aa7.58□□□□□ -1.2
TVP15YDR100W YFR006WP43590 535 aa7.56□□□□□ -1.2
TVP15YDR100W YMR1P47147 688 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
TVP15YDR100W DBP1P24784 617 aaKnown RBP7.53□□□□□ -1.2
TVP15YDR100W RAM2P29703 316 aa7.53□□□□□ -1.2
TVP15YDR100W STS1P38637 319 aa7.53□□□□□ -1.2
TVP15YDR100W SIS1P25294 352 aaKnown RBP7.47□□□□□ -1.21
TVP15YDR100W UBP9P39967 754 aa7.45□□□□□ -1.22
TVP15YDR100W YBL029C-AQ3E756 94 aa7.45□□□□□ -1.22
TVP15YDR100W GTT3P39996 337 aa7.44□□□□□ -1.22
TVP15YDR100W WSC3Q12215 556 aa7.44□□□□□ -1.22
TVP15YDR100W MAK11P20484 414 aaKnown RBP7.4□□□□□ -1.22
TVP15YDR100W VMA1P17255 1071 aaKnown RBP7.39□□□□□ -1.23
TVP15YDR100W VNX1P42839 908 aa7.37□□□□□ -1.23
TVP15YDR100W MIF2P35201 549 aa7.35□□□□□ -1.23
TVP15YDR100W EDS1P38073 919 aa7.34□□□□□ -1.23
TVP15YDR100W COQ8P27697 501 aa7.33□□□□□ -1.24
TVP15YDR100W SET4P42948 560 aa7.32□□□□□ -1.24
TVP15YDR100W YOL036WQ08206 761 aa7.31□□□□□ -1.24
TVP15YDR100W SPP1Q03012 353 aa7.3□□□□□ -1.24
TVP15YDR100W SAM3Q08986 587 aa7.3□□□□□ -1.24
TVP15YDR100W PTC3P34221 468 aaKnown RBP7.26□□□□□ -1.25
TVP15YDR100W SET1P38827 1080 aaKnown RBP7.26□□□□□ -1.25
TVP15YDR100W TIF11P38912 153 aaKnown RBP7.26□□□□□ -1.25
TVP15YDR100W GYP5Q12344 894 aa7.25□□□□□ -1.25
TVP15YDR100W ULI1P43604 169 aa7.23□□□□□ -1.25
TVP15YDR100W MSB4Q12317 492 aa7.23□□□□□ -1.25
TVP15YDR100W DCW1P36091 449 aa7.21□□□□□ -1.26
TVP15YDR100W TRP5P00931 707 aaKnown RBP7.2□□□□□ -1.26
TVP15YDR100W GRE2Q12068 342 aaKnown RBP7.2□□□□□ -1.26
TVP15YDR100W IOC2Q12072 812 aa7.19□□□□□ -1.26
TVP15YDR100W ATH1P48016 1211 aa7.18□□□□□ -1.26
TVP15YDR100W EAP1P36041 632 aaKnown RBP7.17□□□□□ -1.26
TVP15YDR100W SAS10Q12136 610 aaPredicted RBP7.17□□□□□ -1.26
TVP15YDR100W LDB19Q12502 818 aa7.16□□□□□ -1.26
TVP15YDR100W GUT1P32190 709 aa7.15□□□□□ -1.26
TVP15YDR100W HTA1P04911 132 aaKnown RBP7.14□□□□□ -1.27
TVP15YDR100W HTA2P04912 132 aa7.14□□□□□ -1.27
TVP15YDR100W NOP53Q12080 455 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms