RNA–Protein interactions for RNA: YDL127W

PCL2, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeastyeast

Gene PCL2, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL2YDL127W MTC1P47018 478 aaKnown RBP15.67■□□□□ 0.1
PCL2YDL127W DRS1P32892 752 aaKnown RBP15.47■□□□□ 0.07
PCL2YDL127W BFR2Q06631 534 aaKnown RBP13.27□□□□□ -0.29
PCL2YDL127W DIP2Q12220 943 aaPredicted RBP13.27□□□□□ -0.29
PCL2YDL127W FAP1P53971 965 aa13.17□□□□□ -0.3
PCL2YDL127W AVT3P36062 692 aa12.99□□□□□ -0.33
PCL2YDL127W ISW2Q08773 1120 aa12.87□□□□□ -0.35
PCL2YDL127W PRI1P10363 409 aa12.73□□□□□ -0.37
PCL2YDL127W RPG1P38249 964 aaKnown RBP12.63□□□□□ -0.39
PCL2YDL127W RSE1Q04693 1361 aaKnown RBP12.62□□□□□ -0.39
PCL2YDL127W AAD16Q02895 342 aa12.57□□□□□ -0.4
PCL2YDL127W TFA1P36100 482 aa12.31□□□□□ -0.44
PCL2YDL127W PRY3P47033 881 aa12.31□□□□□ -0.44
PCL2YDL127W RPL17AP05740 184 aaKnown RBP12.12□□□□□ -0.47
PCL2YDL127W RPL17BP46990 184 aaKnown RBP12.12□□□□□ -0.47
PCL2YDL127W REB1P21538 810 aa12.05□□□□□ -0.48
PCL2YDL127W TSR3Q12094 313 aaKnown RBP12.04□□□□□ -0.48
PCL2YDL127W HAA1Q12753 694 aaKnown RBP11.67□□□□□ -0.54
PCL2YDL127W MRPL32P25348 183 aa11.66□□□□□ -0.54
PCL2YDL127W SPT21P35209 758 aa11.63□□□□□ -0.55
PCL2YDL127W YCK3P39962 524 aa11.52□□□□□ -0.57
PCL2YDL127W RIM101P33400 625 aa11.44□□□□□ -0.58
PCL2YDL127W YKR023WP36119 530 aaKnown RBP11.3□□□□□ -0.6
PCL2YDL127W CDC27P38042 758 aa11.11□□□□□ -0.63
PCL2YDL127W TFC8Q12308 588 aa11.11□□□□□ -0.63
PCL2YDL127W HOP09932 586 aa11.06□□□□□ -0.64
PCL2YDL127W OXP1P28273 1286 aa11.03□□□□□ -0.64
PCL2YDL127W YIL055CP40523 627 aaKnown RBP11□□□□□ -0.65
PCL2YDL127W YGL015CP33199 130 aa10.97□□□□□ -0.65
PCL2YDL127W DCD1P06773 312 aa10.95□□□□□ -0.66
PCL2YDL127W PTP3P40048 928 aa10.91□□□□□ -0.66
PCL2YDL127W YAH1Q12184 172 aaKnown RBP10.85□□□□□ -0.67
PCL2YDL127W SSP1P38871 571 aa10.84□□□□□ -0.67
PCL2YDL127W UBP10P53874 792 aaPredicted RBP10.81□□□□□ -0.68
PCL2YDL127W RSM7P47150 247 aa10.78□□□□□ -0.68
PCL2YDL127W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.77□□□□□ -0.69not detected
PCL2YDL127W BCH2P36122 765 aa10.76□□□□□ -0.69
PCL2YDL127W MAP2P38174 421 aaKnown RBP10.7□□□□□ -0.7
PCL2YDL127W YLR271WQ06152 274 aa10.7□□□□□ -0.7
PCL2YDL127W SCY1P53009 804 aa10.65□□□□□ -0.7
PCL2YDL127W BBC1P47068 1157 aa10.63□□□□□ -0.71
PCL2YDL127W AI2P03876 854 aa10.6□□□□□ -0.71
PCL2YDL127W EPS1P40557 701 aa10.57□□□□□ -0.72
PCL2YDL127W SLX5P32828 619 aaKnown RBP10.52□□□□□ -0.73
PCL2YDL127W MGA2P40578 1113 aa10.51□□□□□ -0.73
PCL2YDL127W BDF1P35817 686 aa10.5□□□□□ -0.73
PCL2YDL127W PSD2P53037 1138 aaKnown RBP10.47□□□□□ -0.73
PCL2YDL127W TIF4632P39936 914 aaKnown RBP10.41□□□□□ -0.74
PCL2YDL127W CST9Q06032 482 aa10.34□□□□□ -0.75
PCL2YDL127W RQC2Q12532 1038 aaKnown RBP10.32□□□□□ -0.76
PCL2YDL127W TGL3P40308 642 aa10.3□□□□□ -0.76
PCL2YDL127W MRM1P25270 412 aa10.25□□□□□ -0.77
PCL2YDL127W RTG3P38165 486 aa10.15□□□□□ -0.78
PCL2YDL127W NSR1P27476 414 aaKnown RBP RIP-Chip data10.12□□□□□ -0.79not detected
PCL2YDL127W YAP5P40574 245 aa10.05□□□□□ -0.8
PCL2YDL127W DMA1P38823 416 aa10□□□□□ -0.81
PCL2YDL127W YOR238WQ08634 303 aa10□□□□□ -0.81
PCL2YDL127W RCR1P38212 213 aa9.99□□□□□ -0.81
PCL2YDL127W VPS29P38759 282 aa9.99□□□□□ -0.81
PCL2YDL127W YMR1P47147 688 aaKnown RBP RIP-Chip data9.99□□□□□ -0.81not detected
PCL2YDL127W RAM2P29703 316 aa9.95□□□□□ -0.82
PCL2YDL127W MST1P07236 462 aa9.94□□□□□ -0.82
PCL2YDL127W MAK11P20484 414 aaKnown RBP9.9□□□□□ -0.82
PCL2YDL127W DBP1P24784 617 aaKnown RBP9.9□□□□□ -0.82
PCL2YDL127W STS1P38637 319 aa9.85□□□□□ -0.83
PCL2YDL127W BUD31P25337 157 aaPredicted RBP9.82□□□□□ -0.84
PCL2YDL127W YFR006WP43590 535 aa9.82□□□□□ -0.84
PCL2YDL127W GTT3P39996 337 aa9.81□□□□□ -0.84
PCL2YDL127W PIB1Q06651 286 aa9.8□□□□□ -0.84
PCL2YDL127W UBP9P39967 754 aa9.79□□□□□ -0.84
PCL2YDL127W VMA1P17255 1071 aaKnown RBP9.73□□□□□ -0.85
PCL2YDL127W COQ8P27697 501 aa9.73□□□□□ -0.85
PCL2YDL127W MIF2P35201 549 aa9.73□□□□□ -0.85
PCL2YDL127W SET1P38827 1080 aaKnown RBP9.73□□□□□ -0.85
PCL2YDL127W NOP53Q12080 455 aaKnown RBP9.73□□□□□ -0.85
PCL2YDL127W IFH1P39520 1085 aa9.68□□□□□ -0.86
PCL2YDL127W SAM3Q08986 587 aa9.67□□□□□ -0.86
PCL2YDL127W MSB4Q12317 492 aa9.63□□□□□ -0.87
PCL2YDL127W EDS1P38073 919 aa9.62□□□□□ -0.87
PCL2YDL127W PTC3P34221 468 aaKnown RBP9.61□□□□□ -0.87
PCL2YDL127W WSC3Q12215 556 aa9.61□□□□□ -0.87
PCL2YDL127W ABP1P15891 592 aaKnown RBP9.6□□□□□ -0.87
PCL2YDL127W SAS10Q12136 610 aaPredicted RBP9.6□□□□□ -0.87
PCL2YDL127W YBL029C-AQ3E756 94 aa9.6□□□□□ -0.87
PCL2YDL127W VNX1P42839 908 aa9.58□□□□□ -0.88
PCL2YDL127W YOL036WQ08206 761 aa9.58□□□□□ -0.88
PCL2YDL127W GRE2Q12068 342 aaKnown RBP9.58□□□□□ -0.88
PCL2YDL127W GYP5Q12344 894 aa9.58□□□□□ -0.88
PCL2YDL127W EAP1P36041 632 aaKnown RBP9.56□□□□□ -0.88
PCL2YDL127W ATH1P48016 1211 aa9.56□□□□□ -0.88
PCL2YDL127W YPR148CQ06523 435 aa9.56□□□□□ -0.88
PCL2YDL127W SET4P42948 560 aa9.55□□□□□ -0.88
PCL2YDL127W GUT1P32190 709 aa9.53□□□□□ -0.88
PCL2YDL127W SPP1Q03012 353 aa9.52□□□□□ -0.89
PCL2YDL127W TIF11P38912 153 aaKnown RBP9.51□□□□□ -0.89
PCL2YDL127W HTA1P04911 132 aaKnown RBP9.48□□□□□ -0.89
PCL2YDL127W HTA2P04912 132 aa9.48□□□□□ -0.89
PCL2YDL127W CKB1P43639 278 aa9.48□□□□□ -0.89
PCL2YDL127W VPS70P47161 811 aa9.47□□□□□ -0.89
PCL2YDL127W DCW1P36091 449 aa9.46□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms