RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W DRS1P32892 752 aaKnown RBP12.62□□□□□ -0.39
NUP84YDL116W SGS1P35187 1447 aa11.5□□□□□ -0.57
NUP84YDL116W TFA1P36100 482 aa11.49□□□□□ -0.57
NUP84YDL116W MTC1P47018 478 aaKnown RBP11.43□□□□□ -0.58
NUP84YDL116W BFR2Q06631 534 aaKnown RBP11.4□□□□□ -0.59
NUP84YDL116W SSN2P38931 1420 aa11.19□□□□□ -0.62
NUP84YDL116W SPA2P23201 1466 aaKnown RBP11.14□□□□□ -0.63
NUP84YDL116W INO80P53115 1489 aa10.88□□□□□ -0.67
NUP84YDL116W RQC2Q12532 1038 aaKnown RBP10.83□□□□□ -0.68
NUP84YDL116W TCB3Q03640 1545 aaKnown RBP10.68□□□□□ -0.7
NUP84YDL116W TY1B-DR4Q07793 1604 aa10.61□□□□□ -0.71
NUP84YDL116W HSL1P34244 1518 aa10.58□□□□□ -0.72
NUP84YDL116W AVT3P36062 692 aa10.54□□□□□ -0.72
NUP84YDL116W SPT6P23615 1451 aaKnown RBP10.53□□□□□ -0.72
NUP84YDL116W XRN1P22147 1528 aaKnown RBP10.48□□□□□ -0.73
NUP84YDL116W TAF2P23255 1407 aa10.44□□□□□ -0.74
NUP84YDL116W HIR3P47171 1648 aa10.43□□□□□ -0.74
NUP84YDL116W RSE1Q04693 1361 aaKnown RBP10.42□□□□□ -0.74
NUP84YDL116W DIP2Q12220 943 aaPredicted RBP10.35□□□□□ -0.75
NUP84YDL116W REV3P14284 1504 aa10.3□□□□□ -0.76
NUP84YDL116W TAF7Q05021 590 aa10.28□□□□□ -0.76
NUP84YDL116W SWR1Q05471 1514 aa10.26□□□□□ -0.77
NUP84YDL116W SKI3P17883 1432 aaKnown RBP10.25□□□□□ -0.77
NUP84YDL116W MMS22Q06164 1454 aa10.23□□□□□ -0.77
NUP84YDL116W SAS10Q12136 610 aaPredicted RBP10.21□□□□□ -0.77
NUP84YDL116W MON2P48563 1636 aaPredicted RBP10.18□□□□□ -0.78
NUP84YDL116W THO2P53552 1597 aaKnown RBP10.17□□□□□ -0.78
NUP84YDL116W SSK2P53599 1579 aa10.16□□□□□ -0.78
NUP84YDL116W BPT1P14772 1559 aa10.09□□□□□ -0.79
NUP84YDL116W SIN3P22579 1536 aa10.09□□□□□ -0.79
NUP84YDL116W STU1P38198 1513 aa10.08□□□□□ -0.8
NUP84YDL116W ESP1Q03018 1630 aa10.07□□□□□ -0.8
NUP84YDL116W CHD1P32657 1468 aa10.02□□□□□ -0.81
NUP84YDL116W NSR1P27476 414 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
NUP84YDL116W MYO2P19524 1574 aaKnown RBP9.99□□□□□ -0.81
NUP84YDL116W TRM732Q03496 1420 aa9.96□□□□□ -0.81
NUP84YDL116W SCC2Q04002 1493 aa9.94□□□□□ -0.82
NUP84YDL116W POL1P13382 1468 aa9.94□□□□□ -0.82
NUP84YDL116W DMA1P38823 416 aa9.92□□□□□ -0.82
NUP84YDL116W UFD4P33202 1483 aa9.92□□□□□ -0.82
NUP84YDL116W ATG2P53855 1592 aa9.89□□□□□ -0.83
NUP84YDL116W RKR1Q04781 1562 aa9.87□□□□□ -0.83
NUP84YDL116W NOP2P40991 618 aaKnown RBP9.87□□□□□ -0.83
NUP84YDL116W ECM5Q03214 1411 aa9.86□□□□□ -0.83
NUP84YDL116W IFH1P39520 1085 aa9.85□□□□□ -0.83
NUP84YDL116W DNA2P38859 1522 aa9.85□□□□□ -0.83
NUP84YDL116W BUD4P47136 1447 aa9.85□□□□□ -0.83
NUP84YDL116W SSM4P40318 1319 aa9.84□□□□□ -0.83
NUP84YDL116W YTA7P40340 1379 aa9.84□□□□□ -0.83
NUP84YDL116W YPK9Q12697 1472 aa9.82□□□□□ -0.84
NUP84YDL116W IKI3Q06706 1349 aaKnown RBP9.79□□□□□ -0.84
NUP84YDL116W YOR1P53049 1477 aa9.78□□□□□ -0.84
NUP84YDL116W STH1P32597 1359 aa9.76□□□□□ -0.85
NUP84YDL116W SNQ2P32568 1501 aaKnown RBP9.72□□□□□ -0.85
NUP84YDL116W PEP1P32319 1579 aa9.7□□□□□ -0.86
NUP84YDL116W KOG1P38873 1557 aa9.7□□□□□ -0.86
NUP84YDL116W RTT106P40161 455 aa9.69□□□□□ -0.86
NUP84YDL116W MDS3P53094 1487 aa9.68□□□□□ -0.86
NUP84YDL116W MLP2P40457 1679 aa9.67□□□□□ -0.86
NUP84YDL116W MYO4P32492 1471 aa9.67□□□□□ -0.86
NUP84YDL116W PDR15Q04182 1529 aaKnown RBP9.67□□□□□ -0.86
NUP84YDL116W TY2B-LR1P0C2J3 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-FP0CX63 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-GR2P0CX64 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-CP25384 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-DR2Q03494 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY1B-DR1Q03855 1755 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-DR3Q07791 1770 aaKnown RBP9.66□□□□□ -0.86
NUP84YDL116W TY2B-OR1Q12113 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-DR1Q12472 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-OR2Q12501 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY1B-DR3Q99231 1755 aa9.66□□□□□ -0.86
NUP84YDL116W RPO31P04051 1460 aa9.64□□□□□ -0.87
NUP84YDL116W YCF1P39109 1515 aaKnown RBP9.63□□□□□ -0.87
NUP84YDL116W TOP2P06786 1428 aaKnown RBP9.63□□□□□ -0.87
NUP84YDL116W SPP41P38904 1435 aa9.61□□□□□ -0.87
NUP84YDL116W GEA1P47102 1408 aaPredicted RBP9.61□□□□□ -0.87
NUP84YDL116W LEU3P08638 886 aa9.61□□□□□ -0.87
NUP84YDL116W SMC4Q12267 1418 aa9.6□□□□□ -0.87
NUP84YDL116W SPT7P35177 1332 aa9.6□□□□□ -0.87
NUP84YDL116W LEO1P38439 464 aa9.58□□□□□ -0.88
NUP84YDL116W TY2B-BQ12491 1770 aa9.58□□□□□ -0.88
NUP84YDL116W ULS1Q08562 1619 aa9.58□□□□□ -0.88
NUP84YDL116W POL5P39985 1022 aaKnown RBP9.57□□□□□ -0.88
NUP84YDL116W TSC11P40061 1430 aa9.57□□□□□ -0.88
NUP84YDL116W NUP170P38181 1502 aa9.57□□□□□ -0.88
NUP84YDL116W PAN1P32521 1480 aa9.57□□□□□ -0.88
NUP84YDL116W TY3B-GQ99315 1547 aa9.54□□□□□ -0.88
NUP84YDL116W ORC1P54784 914 aaPredicted RBP9.52□□□□□ -0.89
NUP84YDL116W PDR10P51533 1564 aa9.5□□□□□ -0.89
NUP84YDL116W ENP1P38333 483 aaKnown RBP9.47□□□□□ -0.89
NUP84YDL116W VPS15P22219 1454 aa9.46□□□□□ -0.89
NUP84YDL116W TY1B-HO13535 1793 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-DR5P0C2I2 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-DR6P0C2I3 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-LR2P0C2I5 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-LR3P0C2I6 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-PR1P0C2I9 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-PR2P0C2J0 1756 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-PR3P0C2J1 1755 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms