RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeastyeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAM1YDL090C MTC1P47018 478 aaKnown RBP16.75■□□□□ 0.27
RAM1YDL090C DRS1P32892 752 aaKnown RBP16.65■□□□□ 0.26
RAM1YDL090C BFR2Q06631 534 aaKnown RBP14.38□□□□□ -0.11
RAM1YDL090C DIP2Q12220 943 aaPredicted RBP14.17□□□□□ -0.14
RAM1YDL090C FAP1P53971 965 aa14.14□□□□□ -0.15
RAM1YDL090C AVT3P36062 692 aa13.97□□□□□ -0.17
RAM1YDL090C PRI1P10363 409 aa13.71□□□□□ -0.21
RAM1YDL090C ISW2Q08773 1120 aa13.67□□□□□ -0.22
RAM1YDL090C RPG1P38249 964 aaKnown RBP13.52□□□□□ -0.25
RAM1YDL090C TFA1P36100 482 aa13.5□□□□□ -0.25
RAM1YDL090C AAD16Q02895 342 aa13.5□□□□□ -0.25
RAM1YDL090C RSE1Q04693 1361 aaKnown RBP13.39□□□□□ -0.27
RAM1YDL090C PRY3P47033 881 aa13.27□□□□□ -0.29
RAM1YDL090C TSR3Q12094 313 aaKnown RBP12.96□□□□□ -0.33
RAM1YDL090C RPL17AP05740 184 aaKnown RBP12.92□□□□□ -0.34
RAM1YDL090C RPL17BP46990 184 aaKnown RBP12.92□□□□□ -0.34
RAM1YDL090C REB1P21538 810 aa12.76□□□□□ -0.37
RAM1YDL090C YCK3P39962 524 aa12.69□□□□□ -0.38
RAM1YDL090C HAA1Q12753 694 aaKnown RBP12.52□□□□□ -0.41
RAM1YDL090C SPT21P35209 758 aa12.49□□□□□ -0.41
RAM1YDL090C MRPL32P25348 183 aa12.43□□□□□ -0.42
RAM1YDL090C RIM101P33400 625 aa12.22□□□□□ -0.45
RAM1YDL090C YKR023WP36119 530 aaKnown RBP12.17□□□□□ -0.46
RAM1YDL090C CDC27P38042 758 aa12□□□□□ -0.49
RAM1YDL090C OXP1P28273 1286 aa11.9□□□□□ -0.5
RAM1YDL090C TFC8Q12308 588 aa11.9□□□□□ -0.5
RAM1YDL090C HOP09932 586 aa11.87□□□□□ -0.51
RAM1YDL090C PTP3P40048 928 aa11.84□□□□□ -0.51
RAM1YDL090C DCD1P06773 312 aa11.8□□□□□ -0.52
RAM1YDL090C YGL015CP33199 130 aa11.72□□□□□ -0.53
RAM1YDL090C YAH1Q12184 172 aaKnown RBP11.71□□□□□ -0.53
RAM1YDL090C SSP1P38871 571 aa11.67□□□□□ -0.54
RAM1YDL090C YIL055CP40523 627 aaKnown RBP11.66□□□□□ -0.54
RAM1YDL090C UBP10P53874 792 aaPredicted RBP11.55□□□□□ -0.56
RAM1YDL090C YLR271WQ06152 274 aa11.55□□□□□ -0.56
RAM1YDL090C BCH2P36122 765 aa11.53□□□□□ -0.56
RAM1YDL090C MAP2P38174 421 aaKnown RBP11.52□□□□□ -0.57
RAM1YDL090C RSM7P47150 247 aa11.5□□□□□ -0.57
RAM1YDL090C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.44□□□□□ -0.58not detected
RAM1YDL090C SCY1P53009 804 aa11.41□□□□□ -0.58
RAM1YDL090C RQC2Q12532 1038 aaKnown RBP11.31□□□□□ -0.6
RAM1YDL090C AI2P03876 854 aa11.3□□□□□ -0.6
RAM1YDL090C EPS1P40557 701 aa11.3□□□□□ -0.6
RAM1YDL090C MGA2P40578 1113 aa11.24□□□□□ -0.61
RAM1YDL090C BDF1P35817 686 aa11.23□□□□□ -0.61
RAM1YDL090C PSD2P53037 1138 aaKnown RBP11.22□□□□□ -0.61
RAM1YDL090C CST9Q06032 482 aa11.22□□□□□ -0.61
RAM1YDL090C SLX5P32828 619 aaKnown RBP11.21□□□□□ -0.61
RAM1YDL090C BBC1P47068 1157 aa11.19□□□□□ -0.62
RAM1YDL090C DMA1P38823 416 aa11.17□□□□□ -0.62
RAM1YDL090C TIF4632P39936 914 aaKnown RBP11.02□□□□□ -0.65
RAM1YDL090C TGL3P40308 642 aa11□□□□□ -0.65
RAM1YDL090C MRM1P25270 412 aa10.98□□□□□ -0.65
RAM1YDL090C RCR1P38212 213 aa10.85□□□□□ -0.67
RAM1YDL090C NSR1P27476 414 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68not detected
RAM1YDL090C RAM2P29703 316 aa10.79□□□□□ -0.68
RAM1YDL090C RTG3P38165 486 aa10.78□□□□□ -0.68
RAM1YDL090C VPS29P38759 282 aa10.71□□□□□ -0.69
RAM1YDL090C MST1P07236 462 aa10.67□□□□□ -0.7
RAM1YDL090C YAP5P40574 245 aa10.67□□□□□ -0.7
RAM1YDL090C YOR238WQ08634 303 aa10.62□□□□□ -0.71
RAM1YDL090C YMR1P47147 688 aaKnown RBP RIP-Chip data10.59□□□□□ -0.71not detected
RAM1YDL090C MAK11P20484 414 aaKnown RBP10.56□□□□□ -0.72
RAM1YDL090C STS1P38637 319 aa10.56□□□□□ -0.72
RAM1YDL090C YFR006WP43590 535 aa10.55□□□□□ -0.72
RAM1YDL090C DBP1P24784 617 aaKnown RBP10.54□□□□□ -0.72
RAM1YDL090C SET1P38827 1080 aaKnown RBP10.52□□□□□ -0.73
RAM1YDL090C PIB1Q06651 286 aa10.51□□□□□ -0.73
RAM1YDL090C SAS10Q12136 610 aaPredicted RBP10.51□□□□□ -0.73
RAM1YDL090C COQ8P27697 501 aa10.45□□□□□ -0.74
RAM1YDL090C BUD31P25337 157 aaPredicted RBP10.44□□□□□ -0.74
RAM1YDL090C MIF2P35201 549 aa10.41□□□□□ -0.74
RAM1YDL090C EDS1P38073 919 aa10.4□□□□□ -0.74
RAM1YDL090C UBP9P39967 754 aa10.38□□□□□ -0.75
RAM1YDL090C VMA1P17255 1071 aaKnown RBP10.37□□□□□ -0.75
RAM1YDL090C GTT3P39996 337 aa10.36□□□□□ -0.75
RAM1YDL090C YPR148CQ06523 435 aa10.33□□□□□ -0.76
RAM1YDL090C YBL029C-AQ3E756 94 aa10.33□□□□□ -0.76
RAM1YDL090C VPS70P47161 811 aa10.32□□□□□ -0.76
RAM1YDL090C SAM3Q08986 587 aa10.3□□□□□ -0.76
RAM1YDL090C PTC3P34221 468 aaKnown RBP10.28□□□□□ -0.76
RAM1YDL090C VNX1P42839 908 aa10.28□□□□□ -0.76
RAM1YDL090C TAF7Q05021 590 aa10.28□□□□□ -0.76
RAM1YDL090C IFH1P39520 1085 aa10.27□□□□□ -0.77
RAM1YDL090C WSC3Q12215 556 aa10.27□□□□□ -0.77
RAM1YDL090C NOP53Q12080 455 aaKnown RBP10.26□□□□□ -0.77
RAM1YDL090C YOL036WQ08206 761 aa10.23□□□□□ -0.77
RAM1YDL090C MSB4Q12317 492 aa10.19□□□□□ -0.78
RAM1YDL090C SET4P42948 560 aa10.17□□□□□ -0.78
RAM1YDL090C CKB1P43639 278 aa10.17□□□□□ -0.78
RAM1YDL090C SPP1Q03012 353 aa10.16□□□□□ -0.78
RAM1YDL090C TIF11P38912 153 aaKnown RBP10.15□□□□□ -0.78
RAM1YDL090C GRE2Q12068 342 aaKnown RBP10.14□□□□□ -0.79
RAM1YDL090C GYP5Q12344 894 aa10.14□□□□□ -0.79
RAM1YDL090C SPB4P25808 606 aaPredicted RBP10.12□□□□□ -0.79
RAM1YDL090C ATH1P48016 1211 aa10.12□□□□□ -0.79
RAM1YDL090C LEU3P08638 886 aa10.11□□□□□ -0.79
RAM1YDL090C ABP1P15891 592 aaKnown RBP10.09□□□□□ -0.79
RAM1YDL090C GUT1P32190 709 aa10.09□□□□□ -0.79
RAM1YDL090C EAP1P36041 632 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms