RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W MTC1P47018 478 aaKnown RBP11.62□□□□□ -0.55
TSR1YDL060W DRS1P32892 752 aaKnown RBP11.31□□□□□ -0.6
TSR1YDL060W FAP1P53971 965 aa10.12□□□□□ -0.79
TSR1YDL060W DIP2Q12220 943 aaPredicted RBP9.76□□□□□ -0.85
TSR1YDL060W ISW2Q08773 1120 aa9.63□□□□□ -0.87
TSR1YDL060W BFR2Q06631 534 aaKnown RBP9.61□□□□□ -0.87
TSR1YDL060W PRI1P10363 409 aa9.56□□□□□ -0.88
TSR1YDL060W AAD16Q02895 342 aa9.5□□□□□ -0.89
TSR1YDL060W RPG1P38249 964 aaKnown RBP9.47□□□□□ -0.89
TSR1YDL060W PRY3P47033 881 aa9.46□□□□□ -0.9
TSR1YDL060W AVT3P36062 692 aa9.44□□□□□ -0.9
TSR1YDL060W RSE1Q04693 1361 aaKnown RBP9.34□□□□□ -0.91
TSR1YDL060W TSR3Q12094 313 aaKnown RBP9.09□□□□□ -0.95
TSR1YDL060W RPL17AP05740 184 aaKnown RBP9.01□□□□□ -0.97
TSR1YDL060W RPL17BP46990 184 aaKnown RBP9.01□□□□□ -0.97
TSR1YDL060W REB1P21538 810 aa8.99□□□□□ -0.97
TSR1YDL060W HAA1Q12753 694 aaKnown RBP8.89□□□□□ -0.99
TSR1YDL060W MRPL32P25348 183 aa8.8□□□□□ -1
TSR1YDL060W YCK3P39962 524 aa8.73□□□□□ -1.01
TSR1YDL060W TFA1P36100 482 aa8.69□□□□□ -1.02
TSR1YDL060W SPT21P35209 758 aa8.54□□□□□ -1.04
TSR1YDL060W YKR023WP36119 530 aaKnown RBP8.37□□□□□ -1.07
TSR1YDL060W RIM101P33400 625 aa8.37□□□□□ -1.07
TSR1YDL060W YGL015CP33199 130 aa8.31□□□□□ -1.08
TSR1YDL060W CDC27P38042 758 aa8.31□□□□□ -1.08
TSR1YDL060W HOP09932 586 aa8.27□□□□□ -1.09
TSR1YDL060W TFC8Q12308 588 aa8.24□□□□□ -1.09
TSR1YDL060W DCD1P06773 312 aa8.19□□□□□ -1.1
TSR1YDL060W YIL055CP40523 627 aaKnown RBP8.12□□□□□ -1.11
TSR1YDL060W OXP1P28273 1286 aa8.08□□□□□ -1.12
TSR1YDL060W PTP3P40048 928 aa8.07□□□□□ -1.12
TSR1YDL060W UBP10P53874 792 aaPredicted RBP8.07□□□□□ -1.12
TSR1YDL060W MAP2P38174 421 aaKnown RBP8.04□□□□□ -1.12
TSR1YDL060W YAH1Q12184 172 aaKnown RBP8.02□□□□□ -1.13
TSR1YDL060W BCH2P36122 765 aa7.99□□□□□ -1.13
TSR1YDL060W SCY1P53009 804 aa7.99□□□□□ -1.13
TSR1YDL060W RSM7P47150 247 aa7.92□□□□□ -1.14
TSR1YDL060W SLX5P32828 619 aaKnown RBP7.88□□□□□ -1.15
TSR1YDL060W SSP1P38871 571 aa7.86□□□□□ -1.15
TSR1YDL060W BBC1P47068 1157 aa7.85□□□□□ -1.15
TSR1YDL060W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
TSR1YDL060W EPS1P40557 701 aa7.83□□□□□ -1.16
TSR1YDL060W TIF4632P39936 914 aaKnown RBP7.82□□□□□ -1.16
TSR1YDL060W AI2P03876 854 aa7.81□□□□□ -1.16
TSR1YDL060W YLR271WQ06152 274 aa7.81□□□□□ -1.16
TSR1YDL060W BDF1P35817 686 aa7.77□□□□□ -1.17
TSR1YDL060W TGL3P40308 642 aa7.71□□□□□ -1.17
TSR1YDL060W MGA2P40578 1113 aa7.64□□□□□ -1.19
TSR1YDL060W PSD2P53037 1138 aaKnown RBP7.63□□□□□ -1.19
TSR1YDL060W MRM1P25270 412 aa7.56□□□□□ -1.2
TSR1YDL060W CST9Q06032 482 aa7.55□□□□□ -1.2
TSR1YDL060W YAP5P40574 245 aa7.47□□□□□ -1.21
TSR1YDL060W YOR238WQ08634 303 aa7.47□□□□□ -1.21
TSR1YDL060W RTG3P38165 486 aa7.45□□□□□ -1.22
TSR1YDL060W NSR1P27476 414 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
TSR1YDL060W UBP9P39967 754 aa7.44□□□□□ -1.22
TSR1YDL060W MST1P07236 462 aa7.37□□□□□ -1.23
TSR1YDL060W BUD31P25337 157 aaPredicted RBP7.37□□□□□ -1.23
TSR1YDL060W GTT3P39996 337 aa7.35□□□□□ -1.23
TSR1YDL060W YMR1P47147 688 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
TSR1YDL060W PIB1Q06651 286 aa7.33□□□□□ -1.24
TSR1YDL060W VPS29P38759 282 aa7.32□□□□□ -1.24
TSR1YDL060W RCR1P38212 213 aa7.31□□□□□ -1.24
TSR1YDL060W DBP1P24784 617 aaKnown RBP7.3□□□□□ -1.24
TSR1YDL060W YFR006WP43590 535 aa7.28□□□□□ -1.24
TSR1YDL060W WSC3Q12215 556 aa7.26□□□□□ -1.25
TSR1YDL060W YBL029C-AQ3E756 94 aa7.24□□□□□ -1.25
TSR1YDL060W STS1P38637 319 aa7.23□□□□□ -1.25
TSR1YDL060W RAM2P29703 316 aa7.21□□□□□ -1.26
TSR1YDL060W RQC2Q12532 1038 aaKnown RBP7.2□□□□□ -1.26
TSR1YDL060W MAK11P20484 414 aaKnown RBP7.18□□□□□ -1.26
TSR1YDL060W VNX1P42839 908 aa7.18□□□□□ -1.26
TSR1YDL060W SPP1Q03012 353 aa7.18□□□□□ -1.26
TSR1YDL060W VMA1P17255 1071 aaKnown RBP7.17□□□□□ -1.26
TSR1YDL060W SIS1P25294 352 aaKnown RBP7.16□□□□□ -1.26
TSR1YDL060W MIF2P35201 549 aa7.16□□□□□ -1.26
TSR1YDL060W TIF11P38912 153 aaKnown RBP7.12□□□□□ -1.27
TSR1YDL060W MSB4Q12317 492 aa7.12□□□□□ -1.27
TSR1YDL060W SET4P42948 560 aa7.11□□□□□ -1.27
TSR1YDL060W EAP1P36041 632 aaKnown RBP7.1□□□□□ -1.27
TSR1YDL060W YOL036WQ08206 761 aa7.1□□□□□ -1.27
TSR1YDL060W SAM3Q08986 587 aa7.09□□□□□ -1.27
TSR1YDL060W ULI1P43604 169 aa7.09□□□□□ -1.28
TSR1YDL060W GYP5Q12344 894 aa7.09□□□□□ -1.28
TSR1YDL060W COQ8P27697 501 aa7.08□□□□□ -1.28
TSR1YDL060W ABP1P15891 592 aaKnown RBP7.04□□□□□ -1.28
TSR1YDL060W GRE2Q12068 342 aaKnown RBP7.04□□□□□ -1.28
TSR1YDL060W DMA1P38823 416 aa7.04□□□□□ -1.28
TSR1YDL060W ATH1P48016 1211 aa7.03□□□□□ -1.28
TSR1YDL060W SET1P38827 1080 aaKnown RBP7.03□□□□□ -1.28
TSR1YDL060W PTC3P34221 468 aaKnown RBP7.02□□□□□ -1.29
TSR1YDL060W DCW1P36091 449 aa7.02□□□□□ -1.29
TSR1YDL060W EDS1P38073 919 aa7.02□□□□□ -1.29
TSR1YDL060W NOP53Q12080 455 aaKnown RBP7.01□□□□□ -1.29
TSR1YDL060W TRP5P00931 707 aaKnown RBP7□□□□□ -1.29
TSR1YDL060W HTA1P04911 132 aaKnown RBP7□□□□□ -1.29
TSR1YDL060W HTA2P04912 132 aa7□□□□□ -1.29
TSR1YDL060W LDB19Q12502 818 aa7□□□□□ -1.29
TSR1YDL060W GUT1P32190 709 aa6.97□□□□□ -1.29
TSR1YDL060W IOC2Q12072 812 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms