RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W INO80P53115 1489 aa12.76□□□□□ -0.37
SIT4YDL047W MON2P48563 1636 aaPredicted RBP12.75□□□□□ -0.37
SIT4YDL047W DNA2P38859 1522 aa12.16□□□□□ -0.46
SIT4YDL047W SWR1Q05471 1514 aa12.11□□□□□ -0.47
SIT4YDL047W TCB3Q03640 1545 aaKnown RBP12.05□□□□□ -0.48
SIT4YDL047W RSE1Q04693 1361 aaKnown RBP12.02□□□□□ -0.49
SIT4YDL047W TY1B-DR4Q07793 1604 aa12□□□□□ -0.49
SIT4YDL047W KOG1P38873 1557 aa11.96□□□□□ -0.49
SIT4YDL047W SGS1P35187 1447 aa11.87□□□□□ -0.51
SIT4YDL047W SPT6P23615 1451 aaKnown RBP11.56□□□□□ -0.56
SIT4YDL047W HSL1P34244 1518 aa11.55□□□□□ -0.56
SIT4YDL047W SPA2P23201 1466 aaKnown RBP11.43□□□□□ -0.58
SIT4YDL047W ECM5Q03214 1411 aa11.37□□□□□ -0.59
SIT4YDL047W HIR3P47171 1648 aa11.31□□□□□ -0.6
SIT4YDL047W BUD4P47136 1447 aa11.25□□□□□ -0.61
SIT4YDL047W THO2P53552 1597 aaKnown RBP11.24□□□□□ -0.61
SIT4YDL047W MTC1P47018 478 aaKnown RBP11.23□□□□□ -0.61
SIT4YDL047W MDS3P53094 1487 aa11.12□□□□□ -0.63
SIT4YDL047W XRN1P22147 1528 aaKnown RBP11.1□□□□□ -0.63
SIT4YDL047W PEP1P32319 1579 aa11.03□□□□□ -0.64
SIT4YDL047W REV3P14284 1504 aa10.94□□□□□ -0.66
SIT4YDL047W ATG2P53855 1592 aa10.93□□□□□ -0.66
SIT4YDL047W SSN2P38931 1420 aa10.87□□□□□ -0.67
SIT4YDL047W BPT1P14772 1559 aa10.86□□□□□ -0.67
SIT4YDL047W SKI3P17883 1432 aaKnown RBP10.76□□□□□ -0.69
SIT4YDL047W TAF2P23255 1407 aa10.76□□□□□ -0.69
SIT4YDL047W SIN3P22579 1536 aa10.74□□□□□ -0.69
SIT4YDL047W SSK2P53599 1579 aa10.7□□□□□ -0.7
SIT4YDL047W MIF2P35201 549 aa10.66□□□□□ -0.7
SIT4YDL047W YCF1P39109 1515 aaKnown RBP10.66□□□□□ -0.7
SIT4YDL047W ESP1Q03018 1630 aa10.62□□□□□ -0.71
SIT4YDL047W UFD4P33202 1483 aa10.58□□□□□ -0.72
SIT4YDL047W DRS1P32892 752 aaKnown RBP10.55□□□□□ -0.72
SIT4YDL047W YPK9Q12697 1472 aa10.5□□□□□ -0.73
SIT4YDL047W SCC2Q04002 1493 aa10.49□□□□□ -0.73
SIT4YDL047W RPO31P04051 1460 aa10.46□□□□□ -0.74
SIT4YDL047W MYO2P19524 1574 aaKnown RBP10.43□□□□□ -0.74
SIT4YDL047W CHD1P32657 1468 aa10.42□□□□□ -0.74
SIT4YDL047W MET5P47169 1442 aa10.41□□□□□ -0.74
SIT4YDL047W CDC25P04821 1589 aa10.4□□□□□ -0.74
SIT4YDL047W TY2B-LR1P0C2J3 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-FP0CX63 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-GR2P0CX64 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-CP25384 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-DR2Q03494 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY1B-DR1Q03855 1755 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-DR3Q07791 1770 aaKnown RBP10.37□□□□□ -0.75
SIT4YDL047W TY2B-OR1Q12113 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-DR1Q12472 1770 aa10.37□□□□□ -0.75
SIT4YDL047W TY2B-OR2Q12501 1770 aa10.37□□□□□ -0.75
SIT4YDL047W DNF1P32660 1571 aa10.37□□□□□ -0.75
SIT4YDL047W TY1B-BRQ12193 1756 aa10.35□□□□□ -0.75
SIT4YDL047W TY1B-GR3Q12316 1755 aa10.35□□□□□ -0.75
SIT4YDL047W TY1B-ORQ92393 1755 aa10.35□□□□□ -0.75
SIT4YDL047W RQC2Q12532 1038 aaKnown RBP10.33□□□□□ -0.76
SIT4YDL047W ESC1Q03661 1658 aaKnown RBP10.33□□□□□ -0.76
SIT4YDL047W PAN1P32521 1480 aa10.32□□□□□ -0.76
SIT4YDL047W YFR006WP43590 535 aa10.31□□□□□ -0.76
SIT4YDL047W LTE1P07866 1435 aa10.29□□□□□ -0.76
SIT4YDL047W TOP2P06786 1428 aaKnown RBP10.28□□□□□ -0.76
SIT4YDL047W RKR1Q04781 1562 aa10.26□□□□□ -0.77
SIT4YDL047W RPA190P10964 1664 aaKnown RBP10.25□□□□□ -0.77
SIT4YDL047W TY2B-BQ12491 1770 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-HO13535 1793 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-DR5P0C2I2 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-DR6P0C2I3 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-LR2P0C2I5 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-LR3P0C2I6 1755 aaKnown RBP10.24□□□□□ -0.77
SIT4YDL047W TY1B-PR1P0C2I9 1755 aaKnown RBP10.24□□□□□ -0.77
SIT4YDL047W TY1B-PR2P0C2J0 1756 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-PR3P0C2J1 1755 aaKnown RBP10.24□□□□□ -0.77
SIT4YDL047W TY1B-JR1P47098 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-ML2Q03434 1755 aaKnown RBP10.24□□□□□ -0.77
SIT4YDL047W TY1B-ER1Q03612 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-ML1Q04711 1755 aaKnown RBP10.24□□□□□ -0.77
SIT4YDL047W TY1B-GR2Q12269 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-OLQ12273 1755 aa10.24□□□□□ -0.77
SIT4YDL047W TY1B-PLQ12414 1755 aaKnown RBP10.24□□□□□ -0.77
SIT4YDL047W TY1B-DR3Q99231 1755 aa10.21□□□□□ -0.77
SIT4YDL047W BNI1P41832 1953 aa10.21□□□□□ -0.77
SIT4YDL047W MMS22Q06164 1454 aa10.19□□□□□ -0.78
SIT4YDL047W ITT1Q04638 464 aa10.17□□□□□ -0.78
SIT4YDL047W TRM732Q03496 1420 aa10.15□□□□□ -0.79
SIT4YDL047W POL1P13382 1468 aa10.14□□□□□ -0.79
SIT4YDL047W GEA2P39993 1459 aaKnown RBP10.14□□□□□ -0.79
SIT4YDL047W ABP1P15891 592 aaKnown RBP10.13□□□□□ -0.79
SIT4YDL047W SMC4Q12267 1418 aa10.09□□□□□ -0.79
SIT4YDL047W YRF1-1P0CX20 1796 aa10.08□□□□□ -0.8
SIT4YDL047W YRF1-5P0CX21 1796 aa10.08□□□□□ -0.8
SIT4YDL047W YRF1-8P0CX22 1796 aa10.08□□□□□ -0.8
SIT4YDL047W YOR1P53049 1477 aa10.06□□□□□ -0.8
SIT4YDL047W SPP41P38904 1435 aa10.06□□□□□ -0.8
SIT4YDL047W NUP159P40477 1460 aa10.05□□□□□ -0.8
SIT4YDL047W STU1P38198 1513 aa10.04□□□□□ -0.8
SIT4YDL047W TY1B-JR2P47100 1755 aaKnown RBP10.03□□□□□ -0.8
SIT4YDL047W TY1B-ER2Q03619 1755 aa10.03□□□□□ -0.8
SIT4YDL047W TY1B-MR1Q04214 1755 aa10.03□□□□□ -0.8
SIT4YDL047W TY1B-MR2Q04670 1755 aaKnown RBP10.03□□□□□ -0.8
SIT4YDL047W TY1B-LR1Q12088 1755 aaKnown RBP10.03□□□□□ -0.8
SIT4YDL047W TY1B-NL1Q12112 1755 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms