RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C MON2P48563 1636 aaPredicted RBP15.29■□□□□ 0.04
SLM3YDL033C INO80P53115 1489 aa15.29■□□□□ 0.04
SLM3YDL033C DNA2P38859 1522 aa14.57□□□□□ -0.08
SLM3YDL033C SWR1Q05471 1514 aa14.56□□□□□ -0.08
SLM3YDL033C TCB3Q03640 1545 aaKnown RBP14.48□□□□□ -0.09
SLM3YDL033C TY1B-DR4Q07793 1604 aa14.43□□□□□ -0.1
SLM3YDL033C KOG1P38873 1557 aa14.37□□□□□ -0.11
SLM3YDL033C SGS1P35187 1447 aa14.25□□□□□ -0.13
SLM3YDL033C RSE1Q04693 1361 aaKnown RBP14.06□□□□□ -0.16
SLM3YDL033C HSL1P34244 1518 aa13.94□□□□□ -0.18
SLM3YDL033C SPT6P23615 1451 aaKnown RBP13.93□□□□□ -0.18
SLM3YDL033C SPA2P23201 1466 aaKnown RBP13.82□□□□□ -0.2
SLM3YDL033C HIR3P47171 1648 aa13.64□□□□□ -0.23
SLM3YDL033C ECM5Q03214 1411 aa13.63□□□□□ -0.23
SLM3YDL033C BUD4P47136 1447 aa13.53□□□□□ -0.24
SLM3YDL033C THO2P53552 1597 aaKnown RBP13.53□□□□□ -0.24
SLM3YDL033C MTC1P47018 478 aaKnown RBP13.4□□□□□ -0.26
SLM3YDL033C MDS3P53094 1487 aa13.4□□□□□ -0.26
SLM3YDL033C XRN1P22147 1528 aaKnown RBP13.39□□□□□ -0.27
SLM3YDL033C PEP1P32319 1579 aa13.24□□□□□ -0.29
SLM3YDL033C DRS1P32892 752 aaKnown RBP13.24□□□□□ -0.29
SLM3YDL033C ATG2P53855 1592 aa13.17□□□□□ -0.3
SLM3YDL033C REV3P14284 1504 aa13.13□□□□□ -0.31
SLM3YDL033C SSN2P38931 1420 aa13.11□□□□□ -0.31
SLM3YDL033C BPT1P14772 1559 aa13.07□□□□□ -0.32
SLM3YDL033C TAF2P23255 1407 aa13□□□□□ -0.33
SLM3YDL033C SKI3P17883 1432 aaKnown RBP12.98□□□□□ -0.33
SLM3YDL033C SIN3P22579 1536 aa12.96□□□□□ -0.33
SLM3YDL033C SSK2P53599 1579 aa12.9□□□□□ -0.35
SLM3YDL033C YCF1P39109 1515 aaKnown RBP12.83□□□□□ -0.35
SLM3YDL033C ESP1Q03018 1630 aa12.82□□□□□ -0.36
SLM3YDL033C UFD4P33202 1483 aa12.73□□□□□ -0.37
SLM3YDL033C SCC2Q04002 1493 aa12.65□□□□□ -0.38
SLM3YDL033C YPK9Q12697 1472 aa12.64□□□□□ -0.39
SLM3YDL033C MYO2P19524 1574 aaKnown RBP12.64□□□□□ -0.39
SLM3YDL033C RPO31P04051 1460 aa12.56□□□□□ -0.4
SLM3YDL033C CDC25P04821 1589 aa12.54□□□□□ -0.4
SLM3YDL033C CHD1P32657 1468 aa12.53□□□□□ -0.4
SLM3YDL033C ESC1Q03661 1658 aaKnown RBP12.51□□□□□ -0.41
SLM3YDL033C RQC2Q12532 1038 aaKnown RBP12.5□□□□□ -0.41
SLM3YDL033C TY2B-LR1P0C2J3 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-FP0CX63 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-GR2P0CX64 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-CP25384 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-DR2Q03494 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY1B-DR1Q03855 1755 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-DR3Q07791 1770 aaKnown RBP12.5□□□□□ -0.41
SLM3YDL033C TY2B-OR1Q12113 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-DR1Q12472 1770 aa12.5□□□□□ -0.41
SLM3YDL033C TY2B-OR2Q12501 1770 aa12.5□□□□□ -0.41
SLM3YDL033C DNF1P32660 1571 aa12.47□□□□□ -0.41
SLM3YDL033C MET5P47169 1442 aa12.46□□□□□ -0.41
SLM3YDL033C TY1B-BRQ12193 1756 aa12.44□□□□□ -0.42
SLM3YDL033C TY1B-GR3Q12316 1755 aa12.44□□□□□ -0.42
SLM3YDL033C TY1B-ORQ92393 1755 aa12.44□□□□□ -0.42
SLM3YDL033C PAN1P32521 1480 aa12.4□□□□□ -0.42
SLM3YDL033C RKR1Q04781 1562 aa12.38□□□□□ -0.43
SLM3YDL033C TOP2P06786 1428 aaKnown RBP12.36□□□□□ -0.43
SLM3YDL033C LTE1P07866 1435 aa12.35□□□□□ -0.43
SLM3YDL033C RPA190P10964 1664 aaKnown RBP12.35□□□□□ -0.43
SLM3YDL033C TY2B-BQ12491 1770 aa12.33□□□□□ -0.44
SLM3YDL033C TY1B-HO13535 1793 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-DR5P0C2I2 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-DR6P0C2I3 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-LR2P0C2I5 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-LR3P0C2I6 1755 aaKnown RBP12.31□□□□□ -0.44
SLM3YDL033C TY1B-PR1P0C2I9 1755 aaKnown RBP12.31□□□□□ -0.44
SLM3YDL033C TY1B-PR2P0C2J0 1756 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-PR3P0C2J1 1755 aaKnown RBP12.31□□□□□ -0.44
SLM3YDL033C TY1B-JR1P47098 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-ML2Q03434 1755 aaKnown RBP12.31□□□□□ -0.44
SLM3YDL033C TY1B-ER1Q03612 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-ML1Q04711 1755 aaKnown RBP12.31□□□□□ -0.44
SLM3YDL033C TY1B-GR2Q12269 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-OLQ12273 1755 aa12.31□□□□□ -0.44
SLM3YDL033C TY1B-PLQ12414 1755 aaKnown RBP12.31□□□□□ -0.44
SLM3YDL033C TY1B-DR3Q99231 1755 aa12.3□□□□□ -0.44
SLM3YDL033C MMS22Q06164 1454 aa12.28□□□□□ -0.44
SLM3YDL033C MIF2P35201 549 aa12.27□□□□□ -0.45
SLM3YDL033C TRM732Q03496 1420 aa12.23□□□□□ -0.45
SLM3YDL033C POL1P13382 1468 aa12.22□□□□□ -0.45
SLM3YDL033C GEA2P39993 1459 aaKnown RBP12.21□□□□□ -0.45
SLM3YDL033C BNI1P41832 1953 aa12.21□□□□□ -0.46
SLM3YDL033C SMC4Q12267 1418 aa12.15□□□□□ -0.46
SLM3YDL033C ITT1Q04638 464 aa12.15□□□□□ -0.46
SLM3YDL033C YOR1P53049 1477 aa12.14□□□□□ -0.47
SLM3YDL033C STU1P38198 1513 aa12.14□□□□□ -0.47
SLM3YDL033C SPP41P38904 1435 aa12.12□□□□□ -0.47
SLM3YDL033C NUP159P40477 1460 aa12.11□□□□□ -0.47
SLM3YDL033C YRF1-1P0CX20 1796 aa12.1□□□□□ -0.47
SLM3YDL033C YRF1-5P0CX21 1796 aa12.1□□□□□ -0.47
SLM3YDL033C YRF1-8P0CX22 1796 aa12.1□□□□□ -0.47
SLM3YDL033C TY1B-JR2P47100 1755 aaKnown RBP12.07□□□□□ -0.48
SLM3YDL033C TY1B-ER2Q03619 1755 aa12.07□□□□□ -0.48
SLM3YDL033C TY1B-MR1Q04214 1755 aa12.07□□□□□ -0.48
SLM3YDL033C TY1B-MR2Q04670 1755 aaKnown RBP12.07□□□□□ -0.48
SLM3YDL033C TY1B-LR1Q12088 1755 aaKnown RBP12.07□□□□□ -0.48
SLM3YDL033C TY1B-NL1Q12112 1755 aa12.07□□□□□ -0.48
SLM3YDL033C TY1B-GR1Q12141 1755 aa12.07□□□□□ -0.48
SLM3YDL033C TY1B-BLQ12490 1755 aa12.07□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms