RNA–Protein interactions for RNA: YDL022W

GPD1, Transcript of NAD-dependent glycerol-3-phosphate dehydrogenase, yeastyeast

Gene GPD1, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cell cortex, Endoplasmic reticulum, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPD1YDL022W MON2P48563 1636 aaPredicted RBP14.06□□□□□ -0.16
GPD1YDL022W INO80P53115 1489 aa13.98□□□□□ -0.17
GPD1YDL022W TCB3Q03640 1545 aaKnown RBP13.45□□□□□ -0.26
GPD1YDL022W SWR1Q05471 1514 aa13.39□□□□□ -0.27
GPD1YDL022W TY1B-DR4Q07793 1604 aa13.36□□□□□ -0.27
GPD1YDL022W DNA2P38859 1522 aa13.32□□□□□ -0.28
GPD1YDL022W SGS1P35187 1447 aa13.24□□□□□ -0.29
GPD1YDL022W KOG1P38873 1557 aa13.23□□□□□ -0.29
GPD1YDL022W HSL1P34244 1518 aa12.88□□□□□ -0.35
GPD1YDL022W SPT6P23615 1451 aaKnown RBP12.87□□□□□ -0.35
GPD1YDL022W RSE1Q04693 1361 aaKnown RBP12.75□□□□□ -0.37
GPD1YDL022W SPA2P23201 1466 aaKnown RBP12.74□□□□□ -0.37
GPD1YDL022W HIR3P47171 1648 aa12.6□□□□□ -0.39
GPD1YDL022W THO2P53552 1597 aaKnown RBP12.54□□□□□ -0.4
GPD1YDL022W ECM5Q03214 1411 aa12.53□□□□□ -0.4
GPD1YDL022W BUD4P47136 1447 aa12.49□□□□□ -0.41
GPD1YDL022W XRN1P22147 1528 aaKnown RBP12.37□□□□□ -0.43
GPD1YDL022W MDS3P53094 1487 aa12.33□□□□□ -0.44
GPD1YDL022W PEP1P32319 1579 aa12.24□□□□□ -0.45
GPD1YDL022W SSN2P38931 1420 aa12.23□□□□□ -0.45
GPD1YDL022W ATG2P53855 1592 aa12.18□□□□□ -0.46
GPD1YDL022W REV3P14284 1504 aa12.16□□□□□ -0.46
GPD1YDL022W MTC1P47018 478 aaKnown RBP12.1□□□□□ -0.47
GPD1YDL022W SIN3P22579 1536 aa12.1□□□□□ -0.47
GPD1YDL022W BPT1P14772 1559 aa12.02□□□□□ -0.49
GPD1YDL022W SSK2P53599 1579 aa12.01□□□□□ -0.49
GPD1YDL022W SKI3P17883 1432 aaKnown RBP11.94□□□□□ -0.5
GPD1YDL022W ESP1Q03018 1630 aa11.9□□□□□ -0.5
GPD1YDL022W TAF2P23255 1407 aa11.9□□□□□ -0.5
GPD1YDL022W YCF1P39109 1515 aaKnown RBP11.82□□□□□ -0.52
GPD1YDL022W DRS1P32892 752 aaKnown RBP11.82□□□□□ -0.52
GPD1YDL022W MYO2P19524 1574 aaKnown RBP11.79□□□□□ -0.52
GPD1YDL022W YPK9Q12697 1472 aa11.77□□□□□ -0.52
GPD1YDL022W UFD4P33202 1483 aa11.75□□□□□ -0.53
GPD1YDL022W SCC2Q04002 1493 aa11.71□□□□□ -0.53
GPD1YDL022W RPO31P04051 1460 aa11.68□□□□□ -0.54
GPD1YDL022W CDC25P04821 1589 aa11.59□□□□□ -0.55
GPD1YDL022W CHD1P32657 1468 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-LR1P0C2J3 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-FP0CX63 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-GR2P0CX64 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-CP25384 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-DR2Q03494 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY1B-DR1Q03855 1755 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-DR3Q07791 1770 aaKnown RBP11.57□□□□□ -0.56
GPD1YDL022W TY2B-OR1Q12113 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-DR1Q12472 1770 aa11.57□□□□□ -0.56
GPD1YDL022W TY2B-OR2Q12501 1770 aa11.57□□□□□ -0.56
GPD1YDL022W MET5P47169 1442 aa11.55□□□□□ -0.56
GPD1YDL022W TY1B-BRQ12193 1756 aa11.51□□□□□ -0.57
GPD1YDL022W TY1B-GR3Q12316 1755 aa11.51□□□□□ -0.57
GPD1YDL022W TY1B-ORQ92393 1755 aa11.51□□□□□ -0.57
GPD1YDL022W ESC1Q03661 1658 aaKnown RBP11.51□□□□□ -0.57
GPD1YDL022W TOP2P06786 1428 aaKnown RBP11.5□□□□□ -0.57
GPD1YDL022W PAN1P32521 1480 aa11.48□□□□□ -0.57
GPD1YDL022W DNF1P32660 1571 aa11.47□□□□□ -0.57
GPD1YDL022W RKR1Q04781 1562 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-HO13535 1793 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-DR5P0C2I2 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-DR6P0C2I3 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-LR2P0C2I5 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-LR3P0C2I6 1755 aaKnown RBP11.43□□□□□ -0.58
GPD1YDL022W TY1B-PR1P0C2I9 1755 aaKnown RBP11.43□□□□□ -0.58
GPD1YDL022W TY1B-PR2P0C2J0 1756 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-PR3P0C2J1 1755 aaKnown RBP11.43□□□□□ -0.58
GPD1YDL022W TY1B-JR1P47098 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-ML2Q03434 1755 aaKnown RBP11.43□□□□□ -0.58
GPD1YDL022W TY1B-ER1Q03612 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-ML1Q04711 1755 aaKnown RBP11.43□□□□□ -0.58
GPD1YDL022W TY1B-GR2Q12269 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-OLQ12273 1755 aa11.43□□□□□ -0.58
GPD1YDL022W TY1B-PLQ12414 1755 aaKnown RBP11.43□□□□□ -0.58
GPD1YDL022W TY2B-BQ12491 1770 aa11.43□□□□□ -0.58
GPD1YDL022W POL1P13382 1468 aa11.41□□□□□ -0.58
GPD1YDL022W TY1B-DR3Q99231 1755 aa11.41□□□□□ -0.58
GPD1YDL022W RPA190P10964 1664 aaKnown RBP11.4□□□□□ -0.58
GPD1YDL022W LTE1P07866 1435 aa11.39□□□□□ -0.59
GPD1YDL022W RQC2Q12532 1038 aaKnown RBP11.37□□□□□ -0.59
GPD1YDL022W MMS22Q06164 1454 aa11.37□□□□□ -0.59
GPD1YDL022W SMC4Q12267 1418 aa11.34□□□□□ -0.59
GPD1YDL022W YOR1P53049 1477 aa11.31□□□□□ -0.6
GPD1YDL022W TRM732Q03496 1420 aa11.29□□□□□ -0.6
GPD1YDL022W GEA2P39993 1459 aaKnown RBP11.25□□□□□ -0.61
GPD1YDL022W STU1P38198 1513 aa11.25□□□□□ -0.61
GPD1YDL022W SPP41P38904 1435 aa11.24□□□□□ -0.61
GPD1YDL022W BNI1P41832 1953 aa11.23□□□□□ -0.61
GPD1YDL022W TY1B-JR2P47100 1755 aaKnown RBP11.2□□□□□ -0.62
GPD1YDL022W TY1B-ER2Q03619 1755 aa11.2□□□□□ -0.62
GPD1YDL022W TY1B-MR1Q04214 1755 aa11.2□□□□□ -0.62
GPD1YDL022W TY1B-MR2Q04670 1755 aaKnown RBP11.2□□□□□ -0.62
GPD1YDL022W TY1B-LR1Q12088 1755 aaKnown RBP11.2□□□□□ -0.62
GPD1YDL022W TY1B-NL1Q12112 1755 aa11.2□□□□□ -0.62
GPD1YDL022W TY1B-GR1Q12141 1755 aa11.2□□□□□ -0.62
GPD1YDL022W TY1B-BLQ12490 1755 aa11.2□□□□□ -0.62
GPD1YDL022W YRF1-1P0CX20 1796 aa11.18□□□□□ -0.62
GPD1YDL022W YRF1-5P0CX21 1796 aa11.18□□□□□ -0.62
GPD1YDL022W YRF1-8P0CX22 1796 aa11.18□□□□□ -0.62
GPD1YDL022W NUP159P40477 1460 aa11.17□□□□□ -0.62
GPD1YDL022W NTE1Q04958 1679 aa11.17□□□□□ -0.62
GPD1YDL022W TSC11P40061 1430 aa11.17□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms