RNA–Protein interactions for RNA: YDL008W

APC11, Transcript of Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C), yeastyeast

Gene APC11, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APC11YDL008W DRS1P32892 752 aaKnown RBP7.32□□□□□ -1.24
APC11YDL008W MON2P48563 1636 aaPredicted RBP7.23□□□□□ -1.25
APC11YDL008W INO80P53115 1489 aa7.23□□□□□ -1.25
APC11YDL008W RSE1Q04693 1361 aaKnown RBP7.07□□□□□ -1.28
APC11YDL008W FAP1P53971 965 aa6.99□□□□□ -1.29
APC11YDL008W DNA2P38859 1522 aa6.86□□□□□ -1.31
APC11YDL008W MTC1P47018 478 aaKnown RBP6.82□□□□□ -1.32
APC11YDL008W KOG1P38873 1557 aa6.68□□□□□ -1.34
APC11YDL008W SPA2P23201 1466 aaKnown RBP6.62□□□□□ -1.35
APC11YDL008W PRY3P47033 881 aa6.59□□□□□ -1.35
APC11YDL008W SWR1Q05471 1514 aa6.55□□□□□ -1.36
APC11YDL008W BFR2Q06631 534 aaKnown RBP6.53□□□□□ -1.36
APC11YDL008W MIF2P35201 549 aa6.45□□□□□ -1.38
APC11YDL008W TFA1P36100 482 aa6.43□□□□□ -1.38
APC11YDL008W YFR006WP43590 535 aa6.18□□□□□ -1.42
APC11YDL008W TY1B-DR4Q07793 1604 aa6.15□□□□□ -1.42
APC11YDL008W AVT3P36062 692 aa6.12□□□□□ -1.43
APC11YDL008W HAA1Q12753 694 aaKnown RBP6.09□□□□□ -1.43
APC11YDL008W AAD16Q02895 342 aa6.07□□□□□ -1.44
APC11YDL008W YCK3P39962 524 aa6.06□□□□□ -1.44
APC11YDL008W DIP2Q12220 943 aaPredicted RBP6.06□□□□□ -1.44
APC11YDL008W TCB3Q03640 1545 aaKnown RBP6.04□□□□□ -1.44
APC11YDL008W ECM5Q03214 1411 aa5.97□□□□□ -1.45
APC11YDL008W REV3P14284 1504 aa5.96□□□□□ -1.46
APC11YDL008W PRI1P10363 409 aa5.95□□□□□ -1.46
APC11YDL008W MDS3P53094 1487 aa5.85□□□□□ -1.47
APC11YDL008W ABP1P15891 592 aaKnown RBP5.83□□□□□ -1.48
APC11YDL008W BUD4P47136 1447 aa5.82□□□□□ -1.48
APC11YDL008W THO2P53552 1597 aaKnown RBP5.82□□□□□ -1.48
APC11YDL008W RQC2Q12532 1038 aaKnown RBP5.79□□□□□ -1.48
APC11YDL008W BPT1P14772 1559 aa5.78□□□□□ -1.48
APC11YDL008W SPT6P23615 1451 aaKnown RBP5.76□□□□□ -1.49
APC11YDL008W HSL1P34244 1518 aa5.75□□□□□ -1.49
APC11YDL008W PEP1P32319 1579 aa5.72□□□□□ -1.49
APC11YDL008W BNI1P41832 1953 aa5.72□□□□□ -1.49
APC11YDL008W MYO2P19524 1574 aaKnown RBP5.68□□□□□ -1.5
APC11YDL008W HIR3P47171 1648 aa5.68□□□□□ -1.5
APC11YDL008W YCF1P39109 1515 aaKnown RBP5.65□□□□□ -1.5
APC11YDL008W LTE1P07866 1435 aa5.65□□□□□ -1.51
APC11YDL008W DNF1P32660 1571 aa5.63□□□□□ -1.51
APC11YDL008W IRC20Q06554 1556 aa5.63□□□□□ -1.51
APC11YDL008W TAF2P23255 1407 aa5.62□□□□□ -1.51
APC11YDL008W RPA190P10964 1664 aaKnown RBP5.62□□□□□ -1.51
APC11YDL008W TSR3Q12094 313 aaKnown RBP5.6□□□□□ -1.51
APC11YDL008W CDC25P04821 1589 aa5.59□□□□□ -1.52
APC11YDL008W ITT1Q04638 464 aa5.58□□□□□ -1.52
APC11YDL008W MMS1Q06211 1407 aa5.56□□□□□ -1.52
APC11YDL008W ISW2Q08773 1120 aa5.55□□□□□ -1.52
APC11YDL008W MET5P47169 1442 aa5.55□□□□□ -1.52
APC11YDL008W ESC1Q03661 1658 aaKnown RBP5.53□□□□□ -1.52
APC11YDL008W GEA2P39993 1459 aaKnown RBP5.52□□□□□ -1.53
APC11YDL008W RPG1P38249 964 aaKnown RBP5.52□□□□□ -1.53
APC11YDL008W ATG2P53855 1592 aa5.51□□□□□ -1.53
APC11YDL008W DMA1P38823 416 aa5.51□□□□□ -1.53
APC11YDL008W SSK2P53599 1579 aa5.5□□□□□ -1.53
APC11YDL008W RPO31P04051 1460 aa5.47□□□□□ -1.53
APC11YDL008W YGL015CP33199 130 aa5.46□□□□□ -1.54
APC11YDL008W YOR093CQ12275 1648 aa5.41□□□□□ -1.54
APC11YDL008W DNF2Q12675 1612 aa5.41□□□□□ -1.54
APC11YDL008W BUD31P25337 157 aaPredicted RBP5.41□□□□□ -1.54
APC11YDL008W MRPL32P25348 183 aa5.41□□□□□ -1.54
APC11YDL008W RKR1Q04781 1562 aa5.39□□□□□ -1.55
APC11YDL008W RPL17AP05740 184 aaKnown RBP5.38□□□□□ -1.55
APC11YDL008W PTP3P40048 928 aa5.38□□□□□ -1.55
APC11YDL008W RPL17BP46990 184 aaKnown RBP5.38□□□□□ -1.55
APC11YDL008W TAF7Q05021 590 aa5.38□□□□□ -1.55
APC11YDL008W SGS1P35187 1447 aa5.37□□□□□ -1.55
APC11YDL008W XRN1P22147 1528 aaKnown RBP5.35□□□□□ -1.55
APC11YDL008W DRS2P39524 1355 aa5.34□□□□□ -1.55
APC11YDL008W SKI3P17883 1432 aaKnown RBP5.31□□□□□ -1.56
APC11YDL008W NTE1Q04958 1679 aa5.28□□□□□ -1.56
APC11YDL008W CHD1P32657 1468 aa5.27□□□□□ -1.57
APC11YDL008W UFD4P33202 1483 aa5.26□□□□□ -1.57
APC11YDL008W REB1P21538 810 aa5.23□□□□□ -1.57
APC11YDL008W SPT21P35209 758 aa5.23□□□□□ -1.57
APC11YDL008W RIM101P33400 625 aa5.22□□□□□ -1.57
APC11YDL008W TY1B-BRQ12193 1756 aa5.21□□□□□ -1.58
APC11YDL008W TY1B-GR3Q12316 1755 aa5.21□□□□□ -1.58
APC11YDL008W TY1B-ORQ92393 1755 aa5.21□□□□□ -1.58
APC11YDL008W YRF1-1P0CX20 1796 aa5.2□□□□□ -1.58
APC11YDL008W YRF1-5P0CX21 1796 aa5.2□□□□□ -1.58
APC11YDL008W YRF1-8P0CX22 1796 aa5.2□□□□□ -1.58
APC11YDL008W YPK9Q12697 1472 aa5.2□□□□□ -1.58
APC11YDL008W SSP1P38871 571 aa5.19□□□□□ -1.58
APC11YDL008W PAN1P32521 1480 aa5.18□□□□□ -1.58
APC11YDL008W ESP1Q03018 1630 aa5.17□□□□□ -1.58
APC11YDL008W VPS15P22219 1454 aa5.17□□□□□ -1.58
APC11YDL008W LEO1P38439 464 aa5.15□□□□□ -1.59
APC11YDL008W PDR15Q04182 1529 aaKnown RBP5.13□□□□□ -1.59
APC11YDL008W TY2B-LR1P0C2J3 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-FP0CX63 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-GR2P0CX64 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-CP25384 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-DR2Q03494 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY1B-DR1Q03855 1755 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-DR3Q07791 1770 aaKnown RBP5.12□□□□□ -1.59
APC11YDL008W TY2B-OR1Q12113 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-DR1Q12472 1770 aa5.12□□□□□ -1.59
APC11YDL008W TY2B-OR2Q12501 1770 aa5.12□□□□□ -1.59
APC11YDL008W SIS1P25294 352 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms