RNA–Protein interactions for RNA: YBR089C-A

NHP6B, Transcript of High-mobility group (HMG) protein, yeastyeast

Gene NHP6B, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP6BYBR089C-A MTC1P47018 478 aaKnown RBP9.97□□□□□ -0.81
NHP6BYBR089C-A FAP1P53971 965 aa9.66□□□□□ -0.86
NHP6BYBR089C-A SGS1P35187 1447 aa9.33□□□□□ -0.92
NHP6BYBR089C-A SPA2P23201 1466 aaKnown RBP9.21□□□□□ -0.94
NHP6BYBR089C-A PRY3P47033 881 aa9.15□□□□□ -0.94
NHP6BYBR089C-A SSN2P38931 1420 aa9.1□□□□□ -0.95
NHP6BYBR089C-A INO80P53115 1489 aa8.97□□□□□ -0.97
NHP6BYBR089C-A DRS1P32892 752 aaKnown RBP8.93□□□□□ -0.98
NHP6BYBR089C-A PRI1P10363 409 aa8.79□□□□□ -1
NHP6BYBR089C-A AAD16Q02895 342 aa8.79□□□□□ -1
NHP6BYBR089C-A YCK3P39962 524 aa8.77□□□□□ -1.01
NHP6BYBR089C-A SKI3P17883 1432 aaKnown RBP8.7□□□□□ -1.02
NHP6BYBR089C-A TCB3Q03640 1545 aaKnown RBP8.64□□□□□ -1.03
NHP6BYBR089C-A HAA1Q12753 694 aaKnown RBP8.51□□□□□ -1.05
NHP6BYBR089C-A CHD1P32657 1468 aa8.43□□□□□ -1.06
NHP6BYBR089C-A TY1B-DR4Q07793 1604 aa8.4□□□□□ -1.07
NHP6BYBR089C-A HSL1P34244 1518 aa8.35□□□□□ -1.07
NHP6BYBR089C-A SPT6P23615 1451 aaKnown RBP8.35□□□□□ -1.07
NHP6BYBR089C-A MMS22Q06164 1454 aa8.35□□□□□ -1.07
NHP6BYBR089C-A ISW2Q08773 1120 aa8.34□□□□□ -1.07
NHP6BYBR089C-A RPG1P38249 964 aaKnown RBP8.33□□□□□ -1.08
NHP6BYBR089C-A NOP2P40991 618 aaKnown RBP8.33□□□□□ -1.08
NHP6BYBR089C-A XRN1P22147 1528 aaKnown RBP8.32□□□□□ -1.08
NHP6BYBR089C-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
NHP6BYBR089C-A TSR3Q12094 313 aaKnown RBP8.28□□□□□ -1.08
NHP6BYBR089C-A HIR3P47171 1648 aa8.25□□□□□ -1.09
NHP6BYBR089C-A YTA7P40340 1379 aa8.19□□□□□ -1.1
NHP6BYBR089C-A REV3P14284 1504 aa8.18□□□□□ -1.1
NHP6BYBR089C-A SIN3P22579 1536 aa8.16□□□□□ -1.1
NHP6BYBR089C-A IKI3Q06706 1349 aaKnown RBP8.16□□□□□ -1.1
NHP6BYBR089C-A THO2P53552 1597 aaKnown RBP8.14□□□□□ -1.11
NHP6BYBR089C-A UFD4P33202 1483 aa8.14□□□□□ -1.11
NHP6BYBR089C-A SAS10Q12136 610 aaPredicted RBP8.12□□□□□ -1.11
NHP6BYBR089C-A SSK2P53599 1579 aa8.1□□□□□ -1.11
NHP6BYBR089C-A STU1P38198 1513 aa8.1□□□□□ -1.11
NHP6BYBR089C-A TAF2P23255 1407 aa8.1□□□□□ -1.11
NHP6BYBR089C-A POL1P13382 1468 aa8.09□□□□□ -1.11
NHP6BYBR089C-A TRM732Q03496 1420 aa8.09□□□□□ -1.11
NHP6BYBR089C-A RSE1Q04693 1361 aaKnown RBP8.08□□□□□ -1.12
NHP6BYBR089C-A TAF7Q05021 590 aa8.07□□□□□ -1.12
NHP6BYBR089C-A SPP41P38904 1435 aa8.06□□□□□ -1.12
NHP6BYBR089C-A ENP1P38333 483 aaKnown RBP8.05□□□□□ -1.12
NHP6BYBR089C-A SWR1Q05471 1514 aa8.03□□□□□ -1.12
NHP6BYBR089C-A MYO2P19524 1574 aaKnown RBP8.01□□□□□ -1.13
NHP6BYBR089C-A ECM5Q03214 1411 aa8.01□□□□□ -1.13
NHP6BYBR089C-A POL5P39985 1022 aaKnown RBP7.99□□□□□ -1.13
NHP6BYBR089C-A ESP1Q03018 1630 aa7.99□□□□□ -1.13
NHP6BYBR089C-A SSM4P40318 1319 aa7.96□□□□□ -1.14
NHP6BYBR089C-A BUD4P47136 1447 aa7.95□□□□□ -1.14
NHP6BYBR089C-A SCC2Q04002 1493 aa7.95□□□□□ -1.14
NHP6BYBR089C-A DNA2P38859 1522 aa7.95□□□□□ -1.14
NHP6BYBR089C-A BFR2Q06631 534 aaKnown RBP7.95□□□□□ -1.14
NHP6BYBR089C-A MYO4P32492 1471 aa7.94□□□□□ -1.14
NHP6BYBR089C-A YPK9Q12697 1472 aa7.94□□□□□ -1.14
NHP6BYBR089C-A BPT1P14772 1559 aa7.93□□□□□ -1.14
NHP6BYBR089C-A MON2P48563 1636 aaPredicted RBP7.93□□□□□ -1.14
NHP6BYBR089C-A YOR1P53049 1477 aa7.92□□□□□ -1.14
NHP6BYBR089C-A NUP170P38181 1502 aa7.92□□□□□ -1.14
NHP6BYBR089C-A SMC4Q12267 1418 aa7.91□□□□□ -1.14
NHP6BYBR089C-A SEC3P33332 1336 aaKnown RBP7.9□□□□□ -1.14
NHP6BYBR089C-A STH1P32597 1359 aa7.89□□□□□ -1.15
NHP6BYBR089C-A MRPL32P25348 183 aa7.88□□□□□ -1.15
NHP6BYBR089C-A RTT106P40161 455 aa7.84□□□□□ -1.15
NHP6BYBR089C-A RKR1Q04781 1562 aa7.84□□□□□ -1.15
NHP6BYBR089C-A SNQ2P32568 1501 aaKnown RBP7.83□□□□□ -1.16
NHP6BYBR089C-A TOP2P06786 1428 aaKnown RBP7.83□□□□□ -1.16
NHP6BYBR089C-A SPT7P35177 1332 aa7.82□□□□□ -1.16
NHP6BYBR089C-A RPO31P04051 1460 aa7.81□□□□□ -1.16
NHP6BYBR089C-A IFH1P39520 1085 aa7.81□□□□□ -1.16
NHP6BYBR089C-A PAN1P32521 1480 aa7.81□□□□□ -1.16
NHP6BYBR089C-A GEA1P47102 1408 aaPredicted RBP7.8□□□□□ -1.16
NHP6BYBR089C-A DIP2Q12220 943 aaPredicted RBP7.8□□□□□ -1.16
NHP6BYBR089C-A TSC11P40061 1430 aa7.79□□□□□ -1.16
NHP6BYBR089C-A ATG2P53855 1592 aa7.79□□□□□ -1.16
NHP6BYBR089C-A PRS1P32895 427 aaKnown RBP7.77□□□□□ -1.17
NHP6BYBR089C-A TFA1P36100 482 aa7.76□□□□□ -1.17
NHP6BYBR089C-A YGL015CP33199 130 aa7.73□□□□□ -1.17
NHP6BYBR089C-A YCF1P39109 1515 aaKnown RBP7.71□□□□□ -1.18
NHP6BYBR089C-A PEP1P32319 1579 aa7.68□□□□□ -1.18
NHP6BYBR089C-A PDR15Q04182 1529 aaKnown RBP7.68□□□□□ -1.18
NHP6BYBR089C-A VPS15P22219 1454 aa7.65□□□□□ -1.18
NHP6BYBR089C-A KOG1P38873 1557 aa7.63□□□□□ -1.19
NHP6BYBR089C-A CAB3P36076 571 aa7.63□□□□□ -1.19
NHP6BYBR089C-A MLP2P40457 1679 aa7.63□□□□□ -1.19
NHP6BYBR089C-A SNT2P53127 1403 aa7.61□□□□□ -1.19
NHP6BYBR089C-A ULS1Q08562 1619 aa7.6□□□□□ -1.19
NHP6BYBR089C-A TY3B-GQ99315 1547 aa7.59□□□□□ -1.19
NHP6BYBR089C-A PSD2P53037 1138 aaKnown RBP7.59□□□□□ -1.19
NHP6BYBR089C-A SRB8P25648 1427 aa7.59□□□□□ -1.19
NHP6BYBR089C-A YLR419WQ06698 1435 aaKnown RBP7.59□□□□□ -1.19
NHP6BYBR089C-A PDR10P51533 1564 aa7.59□□□□□ -1.2
NHP6BYBR089C-A MDS3P53094 1487 aa7.58□□□□□ -1.2
NHP6BYBR089C-A MHP1P43638 1398 aa7.58□□□□□ -1.2
NHP6BYBR089C-A TY1B-DR3Q99231 1755 aa7.57□□□□□ -1.2
NHP6BYBR089C-A NUP159P40477 1460 aa7.56□□□□□ -1.2
NHP6BYBR089C-A CAT8P39113 1433 aa7.56□□□□□ -1.2
NHP6BYBR089C-A EBP2P36049 427 aaKnown RBP7.56□□□□□ -1.2
NHP6BYBR089C-A LEU3P08638 886 aa7.55□□□□□ -1.2
NHP6BYBR089C-A NOP7P53261 605 aaKnown RBP7.55□□□□□ -1.2
NHP6BYBR089C-A TY2B-LR1P0C2J3 1770 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms