RNA–Protein interactions for RNA: YBR058C-A

TSC3, Transcript of Protein that stimulates the activity of serine palmitoyltransferase, yeastyeast

Gene TSC3, Length 243 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC3YBR058C-A MTC1P47018 478 aaKnown RBP10.23□□□□□ -0.77
TSC3YBR058C-A DRS1P32892 752 aaKnown RBP9.84□□□□□ -0.83
TSC3YBR058C-A FAP1P53971 965 aa8.76□□□□□ -1.01
TSC3YBR058C-A DIP2Q12220 943 aaPredicted RBP8.5□□□□□ -1.05
TSC3YBR058C-A PRI1P10363 409 aa8.43□□□□□ -1.06
TSC3YBR058C-A ISW2Q08773 1120 aa8.36□□□□□ -1.07
TSC3YBR058C-A BFR2Q06631 534 aaKnown RBP8.34□□□□□ -1.07
TSC3YBR058C-A AVT3P36062 692 aa8.33□□□□□ -1.08
TSC3YBR058C-A AAD16Q02895 342 aa8.3□□□□□ -1.08
TSC3YBR058C-A RPG1P38249 964 aaKnown RBP8.27□□□□□ -1.09
TSC3YBR058C-A PRY3P47033 881 aa8.24□□□□□ -1.09
TSC3YBR058C-A RSE1Q04693 1361 aaKnown RBP8.13□□□□□ -1.11
TSC3YBR058C-A TSR3Q12094 313 aaKnown RBP7.96□□□□□ -1.14
TSC3YBR058C-A YCK3P39962 524 aa7.9□□□□□ -1.14
TSC3YBR058C-A RPL17AP05740 184 aaKnown RBP7.86□□□□□ -1.15
TSC3YBR058C-A RPL17BP46990 184 aaKnown RBP7.86□□□□□ -1.15
TSC3YBR058C-A REB1P21538 810 aa7.77□□□□□ -1.17
TSC3YBR058C-A HAA1Q12753 694 aaKnown RBP7.75□□□□□ -1.17
TSC3YBR058C-A MRPL32P25348 183 aa7.62□□□□□ -1.19
TSC3YBR058C-A SPT21P35209 758 aa7.62□□□□□ -1.19
TSC3YBR058C-A TFA1P36100 482 aa7.59□□□□□ -1.19
TSC3YBR058C-A YKR023WP36119 530 aaKnown RBP7.42□□□□□ -1.22
TSC3YBR058C-A RIM101P33400 625 aa7.38□□□□□ -1.23
TSC3YBR058C-A CDC27P38042 758 aa7.37□□□□□ -1.23
TSC3YBR058C-A TFC8Q12308 588 aa7.27□□□□□ -1.25
TSC3YBR058C-A HOP09932 586 aa7.24□□□□□ -1.25
TSC3YBR058C-A DCD1P06773 312 aa7.21□□□□□ -1.26
TSC3YBR058C-A YGL015CP33199 130 aa7.2□□□□□ -1.26
TSC3YBR058C-A OXP1P28273 1286 aa7.15□□□□□ -1.26
TSC3YBR058C-A UBP10P53874 792 aaPredicted RBP7.11□□□□□ -1.27
TSC3YBR058C-A MAP2P38174 421 aaKnown RBP7.09□□□□□ -1.27
TSC3YBR058C-A BCH2P36122 765 aa7.02□□□□□ -1.29
TSC3YBR058C-A SCY1P53009 804 aa6.98□□□□□ -1.29
TSC3YBR058C-A PTP3P40048 928 aa6.97□□□□□ -1.29
TSC3YBR058C-A YIL055CP40523 627 aaKnown RBP6.96□□□□□ -1.3
TSC3YBR058C-A YAH1Q12184 172 aaKnown RBP6.94□□□□□ -1.3
TSC3YBR058C-A RSM7P47150 247 aa6.91□□□□□ -1.3
TSC3YBR058C-A EPS1P40557 701 aa6.89□□□□□ -1.31
TSC3YBR058C-A SLX5P32828 619 aaKnown RBP6.87□□□□□ -1.31
TSC3YBR058C-A YLR271WQ06152 274 aa6.87□□□□□ -1.31
TSC3YBR058C-A SSP1P38871 571 aa6.85□□□□□ -1.31
TSC3YBR058C-A BDF1P35817 686 aa6.84□□□□□ -1.31
TSC3YBR058C-A AI2P03876 854 aa6.82□□□□□ -1.32
TSC3YBR058C-A BBC1P47068 1157 aa6.77□□□□□ -1.33
TSC3YBR058C-A PSD2P53037 1138 aaKnown RBP6.76□□□□□ -1.33
TSC3YBR058C-A TIF4632P39936 914 aaKnown RBP6.75□□□□□ -1.33
TSC3YBR058C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
TSC3YBR058C-A TGL3P40308 642 aa6.73□□□□□ -1.33
TSC3YBR058C-A CST9Q06032 482 aa6.66□□□□□ -1.34
TSC3YBR058C-A MGA2P40578 1113 aa6.65□□□□□ -1.34
TSC3YBR058C-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
TSC3YBR058C-A MRM1P25270 412 aa6.6□□□□□ -1.35
TSC3YBR058C-A MST1P07236 462 aa6.53□□□□□ -1.36
TSC3YBR058C-A BUD31P25337 157 aaPredicted RBP6.51□□□□□ -1.37
TSC3YBR058C-A YAP5P40574 245 aa6.5□□□□□ -1.37
TSC3YBR058C-A YOR238WQ08634 303 aa6.49□□□□□ -1.37
TSC3YBR058C-A RCR1P38212 213 aa6.48□□□□□ -1.37
TSC3YBR058C-A VPS29P38759 282 aa6.46□□□□□ -1.38
TSC3YBR058C-A RTG3P38165 486 aa6.45□□□□□ -1.38
TSC3YBR058C-A YMR1P47147 688 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
TSC3YBR058C-A STS1P38637 319 aa6.4□□□□□ -1.38
TSC3YBR058C-A PIB1Q06651 286 aa6.4□□□□□ -1.38
TSC3YBR058C-A UBP9P39967 754 aa6.39□□□□□ -1.39
TSC3YBR058C-A DBP1P24784 617 aaKnown RBP6.37□□□□□ -1.39
TSC3YBR058C-A RAM2P29703 316 aa6.37□□□□□ -1.39
TSC3YBR058C-A YFR006WP43590 535 aa6.36□□□□□ -1.39
TSC3YBR058C-A YBL029C-AQ3E756 94 aa6.36□□□□□ -1.39
TSC3YBR058C-A GTT3P39996 337 aa6.33□□□□□ -1.4
TSC3YBR058C-A VMA1P17255 1071 aaKnown RBP6.3□□□□□ -1.4
TSC3YBR058C-A VNX1P42839 908 aa6.3□□□□□ -1.4
TSC3YBR058C-A MAK11P20484 414 aaKnown RBP6.29□□□□□ -1.4
TSC3YBR058C-A WSC3Q12215 556 aa6.29□□□□□ -1.4
TSC3YBR058C-A SAM3Q08986 587 aa6.27□□□□□ -1.41
TSC3YBR058C-A YOL036WQ08206 761 aa6.25□□□□□ -1.41
TSC3YBR058C-A MSB4Q12317 492 aa6.23□□□□□ -1.41
TSC3YBR058C-A EDS1P38073 919 aa6.22□□□□□ -1.41
TSC3YBR058C-A TIF11P38912 153 aaKnown RBP6.22□□□□□ -1.41
TSC3YBR058C-A SPP1Q03012 353 aa6.22□□□□□ -1.41
TSC3YBR058C-A SET4P42948 560 aa6.21□□□□□ -1.42
TSC3YBR058C-A COQ8P27697 501 aa6.2□□□□□ -1.42
TSC3YBR058C-A SIS1P25294 352 aaKnown RBP6.17□□□□□ -1.42
TSC3YBR058C-A MIF2P35201 549 aa6.17□□□□□ -1.42
TSC3YBR058C-A IOC2Q12072 812 aa6.16□□□□□ -1.42
TSC3YBR058C-A PTC3P34221 468 aaKnown RBP6.15□□□□□ -1.42
TSC3YBR058C-A ULI1P43604 169 aa6.15□□□□□ -1.42
TSC3YBR058C-A GYP5Q12344 894 aa6.15□□□□□ -1.42
TSC3YBR058C-A EAP1P36041 632 aaKnown RBP6.14□□□□□ -1.43
TSC3YBR058C-A TRP5P00931 707 aaKnown RBP6.13□□□□□ -1.43
TSC3YBR058C-A ABP1P15891 592 aaKnown RBP6.13□□□□□ -1.43
TSC3YBR058C-A FKH1P40466 484 aa6.13□□□□□ -1.43
TSC3YBR058C-A LDB19Q12502 818 aa6.12□□□□□ -1.43
TSC3YBR058C-A GRE2Q12068 342 aaKnown RBP6.11□□□□□ -1.43
TSC3YBR058C-A SET1P38827 1080 aaKnown RBP6.1□□□□□ -1.43
TSC3YBR058C-A NOP53Q12080 455 aaKnown RBP6.1□□□□□ -1.43
TSC3YBR058C-A DCW1P36091 449 aa6.09□□□□□ -1.43
TSC3YBR058C-A HTA1P04911 132 aaKnown RBP6.08□□□□□ -1.44
TSC3YBR058C-A HTA2P04912 132 aa6.08□□□□□ -1.44
TSC3YBR058C-A AIR2Q12476 344 aaKnown RBP6.08□□□□□ -1.44
TSC3YBR058C-A GUT1P32190 709 aa6.07□□□□□ -1.44
TSC3YBR058C-A DMA1P38823 416 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms