RNA–Protein interactions for RNA: YBR017C

KAP104, Transcript of Transportin or cytosolic karyopherin beta 2, yeastyeast

Gene KAP104, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KAP104YBR017C MTC1P47018 478 aaKnown RBP6.94□□□□□ -1.3
KAP104YBR017C FAP1P53971 965 aa6.92□□□□□ -1.3
KAP104YBR017C PRY3P47033 881 aa6.5□□□□□ -1.37
KAP104YBR017C AAD16Q02895 342 aa6.22□□□□□ -1.41
KAP104YBR017C PRI1P10363 409 aa6.12□□□□□ -1.43
KAP104YBR017C HAA1Q12753 694 aaKnown RBP6.08□□□□□ -1.44
KAP104YBR017C DRS1P32892 752 aaKnown RBP6□□□□□ -1.45
KAP104YBR017C ISW2Q08773 1120 aa5.94□□□□□ -1.46
KAP104YBR017C YCK3P39962 524 aa5.92□□□□□ -1.46
KAP104YBR017C RPG1P38249 964 aaKnown RBP5.84□□□□□ -1.47
KAP104YBR017C TSR3Q12094 313 aaKnown RBP5.79□□□□□ -1.48
KAP104YBR017C MRPL32P25348 183 aa5.64□□□□□ -1.51
KAP104YBR017C YGL015CP33199 130 aa5.54□□□□□ -1.52
KAP104YBR017C RSE1Q04693 1361 aaKnown RBP5.44□□□□□ -1.54
KAP104YBR017C DIP2Q12220 943 aaPredicted RBP5.43□□□□□ -1.54
KAP104YBR017C REB1P21538 810 aa5.35□□□□□ -1.55
KAP104YBR017C RPL17AP05740 184 aaKnown RBP5.29□□□□□ -1.56
KAP104YBR017C RPL17BP46990 184 aaKnown RBP5.29□□□□□ -1.56
KAP104YBR017C BUD31P25337 157 aaPredicted RBP5.24□□□□□ -1.57
KAP104YBR017C CDC27P38042 758 aa5.14□□□□□ -1.59
KAP104YBR017C UBP10P53874 792 aaPredicted RBP5.13□□□□□ -1.59
KAP104YBR017C MAP2P38174 421 aaKnown RBP5.07□□□□□ -1.6
KAP104YBR017C SIS1P25294 352 aaKnown RBP5.04□□□□□ -1.6
KAP104YBR017C AVT3P36062 692 aa5.01□□□□□ -1.61
KAP104YBR017C UBP9P39967 754 aa5.01□□□□□ -1.61
KAP104YBR017C TIF4632P39936 914 aaKnown RBP4.99□□□□□ -1.61
KAP104YBR017C YKR023WP36119 530 aaKnown RBP4.98□□□□□ -1.61
KAP104YBR017C HOP09932 586 aa4.93□□□□□ -1.62
KAP104YBR017C TGL3P40308 642 aa4.91□□□□□ -1.62
KAP104YBR017C TFC8Q12308 588 aa4.91□□□□□ -1.62
KAP104YBR017C SLX5P32828 619 aaKnown RBP4.91□□□□□ -1.62
KAP104YBR017C SPT21P35209 758 aa4.91□□□□□ -1.62
KAP104YBR017C SCY1P53009 804 aa4.91□□□□□ -1.62
KAP104YBR017C DCD1P06773 312 aa4.88□□□□□ -1.63
KAP104YBR017C BFR2Q06631 534 aaKnown RBP4.77□□□□□ -1.65
KAP104YBR017C RQC2Q12532 1038 aaKnown RBP4.73□□□□□ -1.65
KAP104YBR017C BCH2P36122 765 aa4.72□□□□□ -1.65
KAP104YBR017C TFA1P36100 482 aa4.67□□□□□ -1.66
KAP104YBR017C RIM101P33400 625 aa4.66□□□□□ -1.66
KAP104YBR017C YOR238WQ08634 303 aa4.64□□□□□ -1.67
KAP104YBR017C YBL029C-AQ3E756 94 aa4.63□□□□□ -1.67
KAP104YBR017C EPS1P40557 701 aa4.59□□□□□ -1.67
KAP104YBR017C MST1P07236 462 aa4.58□□□□□ -1.68
KAP104YBR017C YJL171CP46992 396 aa4.58□□□□□ -1.68
KAP104YBR017C BDF1P35817 686 aa4.57□□□□□ -1.68
KAP104YBR017C SPP1Q03012 353 aa4.57□□□□□ -1.68
KAP104YBR017C VNX1P42839 908 aa4.56□□□□□ -1.68
KAP104YBR017C YIL055CP40523 627 aaKnown RBP4.54□□□□□ -1.68
KAP104YBR017C WSC3Q12215 556 aa4.54□□□□□ -1.68
KAP104YBR017C PTP3P40048 928 aa4.53□□□□□ -1.68
KAP104YBR017C YAP5P40574 245 aa4.52□□□□□ -1.69
KAP104YBR017C GTT3P39996 337 aa4.52□□□□□ -1.69
KAP104YBR017C BBC1P47068 1157 aa4.51□□□□□ -1.69
KAP104YBR017C TAF7Q05021 590 aa4.5□□□□□ -1.69
KAP104YBR017C NSR1P27476 414 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
KAP104YBR017C TIF11P38912 153 aaKnown RBP4.48□□□□□ -1.69
KAP104YBR017C OXP1P28273 1286 aa4.46□□□□□ -1.7
KAP104YBR017C AIR2Q12476 344 aaKnown RBP4.46□□□□□ -1.7
KAP104YBR017C FKH1P40466 484 aa4.44□□□□□ -1.7
KAP104YBR017C BMT6Q12291 365 aa4.42□□□□□ -1.7
KAP104YBR017C RSM7P47150 247 aa4.42□□□□□ -1.7
KAP104YBR017C AI2P03876 854 aa4.4□□□□□ -1.7
KAP104YBR017C ULI1P43604 169 aa4.4□□□□□ -1.7
KAP104YBR017C LDB19Q12502 818 aa4.39□□□□□ -1.71
KAP104YBR017C YAH1Q12184 172 aaKnown RBP4.36□□□□□ -1.71
KAP104YBR017C EAP1P36041 632 aaKnown RBP4.34□□□□□ -1.72
KAP104YBR017C URN1Q06525 465 aaKnown RBP4.33□□□□□ -1.72
KAP104YBR017C IOC2Q12072 812 aa4.32□□□□□ -1.72
KAP104YBR017C PIB1Q06651 286 aa4.31□□□□□ -1.72
KAP104YBR017C MSB4Q12317 492 aa4.31□□□□□ -1.72
KAP104YBR017C RTG1P32607 177 aa4.29□□□□□ -1.72
KAP104YBR017C TFG1P41895 735 aaPredicted RBP4.28□□□□□ -1.72
KAP104YBR017C NCR1Q12200 1170 aa4.28□□□□□ -1.72
KAP104YBR017C SET4P42948 560 aa4.25□□□□□ -1.73
KAP104YBR017C YNL035CP53962 389 aaKnown RBP4.25□□□□□ -1.73
KAP104YBR017C TRP5P00931 707 aaKnown RBP4.23□□□□□ -1.73
KAP104YBR017C SEC61P32915 480 aa4.23□□□□□ -1.73
KAP104YBR017C YOL036WQ08206 761 aa4.23□□□□□ -1.73
KAP104YBR017C MRM1P25270 412 aa4.22□□□□□ -1.73
KAP104YBR017C EBP2P36049 427 aaKnown RBP4.2□□□□□ -1.74
KAP104YBR017C BCK2P33306 851 aa4.19□□□□□ -1.74
KAP104YBR017C NOP2P40991 618 aaKnown RBP4.18□□□□□ -1.74
KAP104YBR017C CAB3P36076 571 aa4.18□□□□□ -1.74
KAP104YBR017C YLR271WQ06152 274 aa4.18□□□□□ -1.74
KAP104YBR017C SAP30P38429 201 aa4.17□□□□□ -1.74
KAP104YBR017C YMR1P47147 688 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
KAP104YBR017C PSD2P53037 1138 aaKnown RBP4.17□□□□□ -1.74
KAP104YBR017C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
KAP104YBR017C DBP1P24784 617 aaKnown RBP4.15□□□□□ -1.74
KAP104YBR017C SIS2P36024 562 aa4.15□□□□□ -1.74
KAP104YBR017C CHL1P22516 861 aaPredicted RBP4.14□□□□□ -1.75
KAP104YBR017C JIP4Q03361 876 aa4.14□□□□□ -1.75
KAP104YBR017C YFR006WP43590 535 aa4.14□□□□□ -1.75
KAP104YBR017C VMA1P17255 1071 aaKnown RBP4.13□□□□□ -1.75
KAP104YBR017C YDL129WQ07555 291 aa4.13□□□□□ -1.75
KAP104YBR017C ABP1P15891 592 aaKnown RBP4.13□□□□□ -1.75
KAP104YBR017C YRB30P53107 440 aaPredicted RBP4.13□□□□□ -1.75
KAP104YBR017C SKI3P17883 1432 aaKnown RBP4.12□□□□□ -1.75
KAP104YBR017C RTG3P38165 486 aa4.12□□□□□ -1.75
KAP104YBR017C SAM3Q08986 587 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms