RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C MTC1P47018 478 aaKnown RBP18.11■□□□□ 0.49
RTG3YBL103C DRS1P32892 752 aaKnown RBP17.44■□□□□ 0.38
RTG3YBL103C FAP1P53971 965 aa15.77■□□□□ 0.11
RTG3YBL103C DIP2Q12220 943 aaPredicted RBP15.1■□□□□ 0.01
RTG3YBL103C PRI1P10363 409 aa14.97□□□□□ -0.01
RTG3YBL103C ISW2Q08773 1120 aa14.89□□□□□ -0.03
RTG3YBL103C AAD16Q02895 342 aa14.82□□□□□ -0.04
RTG3YBL103C PRY3P47033 881 aa14.78□□□□□ -0.04
RTG3YBL103C RPG1P38249 964 aaKnown RBP14.75□□□□□ -0.05
RTG3YBL103C BFR2Q06631 534 aaKnown RBP14.74□□□□□ -0.05
RTG3YBL103C AVT3P36062 692 aa14.69□□□□□ -0.06
RTG3YBL103C RSE1Q04693 1361 aaKnown RBP14.44□□□□□ -0.1
RTG3YBL103C TSR3Q12094 313 aaKnown RBP14.22□□□□□ -0.13
RTG3YBL103C RPL17AP05740 184 aaKnown RBP13.98□□□□□ -0.17
RTG3YBL103C RPL17BP46990 184 aaKnown RBP13.98□□□□□ -0.17
RTG3YBL103C YCK3P39962 524 aa13.97□□□□□ -0.17
RTG3YBL103C REB1P21538 810 aa13.87□□□□□ -0.19
RTG3YBL103C HAA1Q12753 694 aaKnown RBP13.85□□□□□ -0.19
RTG3YBL103C MRPL32P25348 183 aa13.63□□□□□ -0.23
RTG3YBL103C SPT21P35209 758 aa13.38□□□□□ -0.27
RTG3YBL103C TFA1P36100 482 aa13.31□□□□□ -0.28
RTG3YBL103C YKR023WP36119 530 aaKnown RBP13.14□□□□□ -0.31
RTG3YBL103C CDC27P38042 758 aa13.06□□□□□ -0.32
RTG3YBL103C RIM101P33400 625 aa13.04□□□□□ -0.32
RTG3YBL103C YGL015CP33199 130 aa12.91□□□□□ -0.34
RTG3YBL103C HOP09932 586 aa12.91□□□□□ -0.34
RTG3YBL103C TFC8Q12308 588 aa12.86□□□□□ -0.35
RTG3YBL103C DCD1P06773 312 aa12.85□□□□□ -0.35
RTG3YBL103C OXP1P28273 1286 aa12.63□□□□□ -0.39
RTG3YBL103C MAP2P38174 421 aaKnown RBP12.59□□□□□ -0.39
RTG3YBL103C UBP10P53874 792 aaPredicted RBP12.56□□□□□ -0.4
RTG3YBL103C BCH2P36122 765 aa12.47□□□□□ -0.41
RTG3YBL103C YIL055CP40523 627 aaKnown RBP12.45□□□□□ -0.42
RTG3YBL103C SCY1P53009 804 aa12.44□□□□□ -0.42
RTG3YBL103C PTP3P40048 928 aa12.42□□□□□ -0.42
RTG3YBL103C YAH1Q12184 172 aaKnown RBP12.37□□□□□ -0.43
RTG3YBL103C RSM7P47150 247 aa12.25□□□□□ -0.45
RTG3YBL103C SLX5P32828 619 aaKnown RBP12.22□□□□□ -0.45
RTG3YBL103C EPS1P40557 701 aa12.2□□□□□ -0.46
RTG3YBL103C YLR271WQ06152 274 aa12.14□□□□□ -0.47
RTG3YBL103C BDF1P35817 686 aa12.14□□□□□ -0.47
RTG3YBL103C SSP1P38871 571 aa12.11□□□□□ -0.47
RTG3YBL103C AI2P03876 854 aa12.1□□□□□ -0.47
RTG3YBL103C TIF4632P39936 914 aaKnown RBP12.07□□□□□ -0.48
RTG3YBL103C BBC1P47068 1157 aa12.06□□□□□ -0.48
RTG3YBL103C TGL3P40308 642 aa11.99□□□□□ -0.49
RTG3YBL103C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.97□□□□□ -0.49not detected
RTG3YBL103C PSD2P53037 1138 aaKnown RBP11.89□□□□□ -0.51
RTG3YBL103C CST9Q06032 482 aa11.76□□□□□ -0.53
RTG3YBL103C MGA2P40578 1113 aa11.76□□□□□ -0.53
RTG3YBL103C MRM1P25270 412 aa11.71□□□□□ -0.53
RTG3YBL103C BUD31P25337 157 aaPredicted RBP11.59□□□□□ -0.55
RTG3YBL103C NSR1P27476 414 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
RTG3YBL103C YOR238WQ08634 303 aa11.57□□□□□ -0.56
RTG3YBL103C YAP5P40574 245 aa11.56□□□□□ -0.56
RTG3YBL103C MST1P07236 462 aa11.53□□□□□ -0.56
RTG3YBL103C RTG3P38165 486 aa11.47□□□□□ -0.57
RTG3YBL103C UBP9P39967 754 aa11.47□□□□□ -0.57
RTG3YBL103C RCR1P38212 213 aa11.44□□□□□ -0.58
RTG3YBL103C VPS29P38759 282 aa11.42□□□□□ -0.58
RTG3YBL103C PIB1Q06651 286 aa11.42□□□□□ -0.58
RTG3YBL103C YMR1P47147 688 aaKnown RBP RIP-Chip data11.36□□□□□ -0.59not detected
RTG3YBL103C YBL029C-AQ3E756 94 aa11.32□□□□□ -0.6
RTG3YBL103C DBP1P24784 617 aaKnown RBP11.32□□□□□ -0.6
RTG3YBL103C YFR006WP43590 535 aa11.32□□□□□ -0.6
RTG3YBL103C STS1P38637 319 aa11.29□□□□□ -0.6
RTG3YBL103C GTT3P39996 337 aa11.29□□□□□ -0.6
RTG3YBL103C WSC3Q12215 556 aa11.26□□□□□ -0.61
RTG3YBL103C VNX1P42839 908 aa11.21□□□□□ -0.61
RTG3YBL103C RAM2P29703 316 aa11.2□□□□□ -0.62
RTG3YBL103C VMA1P17255 1071 aaKnown RBP11.13□□□□□ -0.63
RTG3YBL103C SPP1Q03012 353 aa11.12□□□□□ -0.63
RTG3YBL103C SIS1P25294 352 aaKnown RBP11.12□□□□□ -0.63
RTG3YBL103C MAK11P20484 414 aaKnown RBP11.08□□□□□ -0.64
RTG3YBL103C TIF11P38912 153 aaKnown RBP11.05□□□□□ -0.64
RTG3YBL103C YOL036WQ08206 761 aa11.05□□□□□ -0.64
RTG3YBL103C SET4P42948 560 aa11.04□□□□□ -0.64
RTG3YBL103C SAM3Q08986 587 aa11.02□□□□□ -0.65
RTG3YBL103C MIF2P35201 549 aa11□□□□□ -0.65
RTG3YBL103C MSB4Q12317 492 aa11□□□□□ -0.65
RTG3YBL103C ULI1P43604 169 aa10.98□□□□□ -0.65
RTG3YBL103C COQ8P27697 501 aa10.94□□□□□ -0.66
RTG3YBL103C EDS1P38073 919 aa10.94□□□□□ -0.66
RTG3YBL103C GYP5Q12344 894 aa10.93□□□□□ -0.66
RTG3YBL103C EAP1P36041 632 aaKnown RBP10.92□□□□□ -0.66
RTG3YBL103C IOC2Q12072 812 aa10.92□□□□□ -0.66
RTG3YBL103C TRP5P00931 707 aaKnown RBP10.89□□□□□ -0.67
RTG3YBL103C LDB19Q12502 818 aa10.89□□□□□ -0.67
RTG3YBL103C PTC3P34221 468 aaKnown RBP10.87□□□□□ -0.67
RTG3YBL103C DCW1P36091 449 aa10.85□□□□□ -0.67
RTG3YBL103C GRE2Q12068 342 aaKnown RBP10.84□□□□□ -0.67
RTG3YBL103C ABP1P15891 592 aaKnown RBP10.81□□□□□ -0.68
RTG3YBL103C HTA1P04911 132 aaKnown RBP10.8□□□□□ -0.68
RTG3YBL103C HTA2P04912 132 aa10.8□□□□□ -0.68
RTG3YBL103C FKH1P40466 484 aa10.8□□□□□ -0.68
RTG3YBL103C SET1P38827 1080 aaKnown RBP10.79□□□□□ -0.68
RTG3YBL103C ATH1P48016 1211 aa10.79□□□□□ -0.68
RTG3YBL103C AIR2Q12476 344 aaKnown RBP10.77□□□□□ -0.69
RTG3YBL103C GUT1P32190 709 aa10.75□□□□□ -0.69
RTG3YBL103C RTG1P32607 177 aa10.75□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms