RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 NISCHQ9Y2I1 1504 aa40.35■■■■■ 4.05
RGPD1-205ENST00000641339 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
RGPD1-205ENST00000641339 ABCC9O60706 1549 aa35.29■■■■□ 3.24
RGPD1-205ENST00000641339 DCAF8L2P0C7V8 631 aa33.79■■■■□ 3
RGPD1-205ENST00000641339 RB1CC1Q8TDY2 1594 aa33.78■■■■□ 3
RGPD1-205ENST00000641339 NACADO15069 1562 aa33.75■■■□□ 2.99
RGPD1-205ENST00000641339 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.97
RGPD1-205ENST00000641339 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
RGPD1-205ENST00000641339 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
RGPD1-205ENST00000641339 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
RGPD1-205ENST00000641339 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
RGPD1-205ENST00000641339 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
RGPD1-205ENST00000641339 BICRAQ9NZM4 1560 aa32.84■■■□□ 2.85
RGPD1-205ENST00000641339 SCRIBQ14160 1630 aa32.7■■■□□ 2.83
RGPD1-205ENST00000641339 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
RGPD1-205ENST00000641339 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
RGPD1-205ENST00000641339 CC2D2AQ9P2K1 1620 aa31.85■■■□□ 2.69
RGPD1-205ENST00000641339 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
RGPD1-205ENST00000641339 SMARCA4P51532 1647 aa31.28■■■□□ 2.6
RGPD1-205ENST00000641339 BAZ1AQ9NRL2 1556 aaPredicted RBP31.23■■■□□ 2.59
RGPD1-205ENST00000641339 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
RGPD1-205ENST00000641339 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
RGPD1-205ENST00000641339 MROH2BQ7Z745 1585 aa31.11■■■□□ 2.57
RGPD1-205ENST00000641339 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
RGPD1-205ENST00000641339 PEG3Q9GZU2 1588 aa31■■■□□ 2.55
RGPD1-205ENST00000641339 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
RGPD1-205ENST00000641339 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.53
RGPD1-205ENST00000641339 RSF1Q96T23 1441 aaPredicted RBP30.75■■■□□ 2.51
RGPD1-205ENST00000641339 WIZO95785 1651 aa30.73■■■□□ 2.51
RGPD1-205ENST00000641339 NESP48681 1621 aa30.49■■■□□ 2.47
RGPD1-205ENST00000641339 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
RGPD1-205ENST00000641339 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
RGPD1-205ENST00000641339 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.44
RGPD1-205ENST00000641339 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
RGPD1-205ENST00000641339 CUX2O14529 1486 aa30.25■■■□□ 2.43
RGPD1-205ENST00000641339 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
RGPD1-205ENST00000641339 PDS5BQ9NTI5 1447 aa30.16■■■□□ 2.42
RGPD1-205ENST00000641339 CCDC88BA6NC98 1476 aa30.1■■■□□ 2.41
RGPD1-205ENST00000641339 CFTRP13569 1480 aa30.09■■■□□ 2.41
RGPD1-205ENST00000641339 KIF21AQ7Z4S6 1674 aa30.01■■■□□ 2.4
RGPD1-205ENST00000641339 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
RGPD1-205ENST00000641339 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
RGPD1-205ENST00000641339 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
RGPD1-205ENST00000641339 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
RGPD1-205ENST00000641339 MRC2Q9UBG0 1479 aa29.84■■■□□ 2.37
RGPD1-205ENST00000641339 WDR62O43379 1518 aa29.75■■■□□ 2.35
RGPD1-205ENST00000641339 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
RGPD1-205ENST00000641339 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
RGPD1-205ENST00000641339 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
RGPD1-205ENST00000641339 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
RGPD1-205ENST00000641339 DNMBPQ6XZF7 1577 aa29.34■■■□□ 2.29
RGPD1-205ENST00000641339 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
RGPD1-205ENST00000641339 CUX1P39880 1505 aa29.18■■■□□ 2.26
RGPD1-205ENST00000641339 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
RGPD1-205ENST00000641339 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
RGPD1-205ENST00000641339 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
RGPD1-205ENST00000641339 SOGA1O94964 1423 aa29.08■■■□□ 2.25
RGPD1-205ENST00000641339 RAD54L2Q9Y4B4 1467 aa29.08■■■□□ 2.25
RGPD1-205ENST00000641339 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
RGPD1-205ENST00000641339 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
RGPD1-205ENST00000641339 AQRO60306 1485 aaKnown RBP eCLIP29.01■■■□□ 2.23
RGPD1-205ENST00000641339 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
RGPD1-205ENST00000641339 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.22
RGPD1-205ENST00000641339 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
RGPD1-205ENST00000641339 OSCARQ8IYS5 282 aa28.93■■■□□ 2.22
RGPD1-205ENST00000641339 SYNJ1O43426 1573 aa28.87■■■□□ 2.21
RGPD1-205ENST00000641339 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
RGPD1-205ENST00000641339 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
RGPD1-205ENST00000641339 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
RGPD1-205ENST00000641339 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
RGPD1-205ENST00000641339 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
RGPD1-205ENST00000641339 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
RGPD1-205ENST00000641339 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
RGPD1-205ENST00000641339 FBLN2P98095 1184 aa28.65■■■□□ 2.18
RGPD1-205ENST00000641339 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
RGPD1-205ENST00000641339 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
RGPD1-205ENST00000641339 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
RGPD1-205ENST00000641339 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
RGPD1-205ENST00000641339 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
RGPD1-205ENST00000641339 CHD1O14646 1710 aa28.6■■■□□ 2.17
RGPD1-205ENST00000641339 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
RGPD1-205ENST00000641339 PBRM1Q86U86 1689 aa28.55■■■□□ 2.16
RGPD1-205ENST00000641339 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
RGPD1-205ENST00000641339 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
RGPD1-205ENST00000641339 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
RGPD1-205ENST00000641339 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
RGPD1-205ENST00000641339 ADAMTS12P58397 1594 aa28.37■■■□□ 2.13
RGPD1-205ENST00000641339 CLASP1Q7Z460 1538 aa28.35■■■□□ 2.13
RGPD1-205ENST00000641339 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
RGPD1-205ENST00000641339 IGF1RP08069 1367 aa28.33■■■□□ 2.13
RGPD1-205ENST00000641339 KIF27Q86VH2 1401 aa28.33■■■□□ 2.13
RGPD1-205ENST00000641339 CYB5RLQ6IPT4 315 aa28.32■■■□□ 2.12
RGPD1-205ENST00000641339 NUP160Q12769 1436 aa28.25■■■□□ 2.11
RGPD1-205ENST00000641339 ARAP1Q96P48 1450 aa28.23■■■□□ 2.11
RGPD1-205ENST00000641339 CEP170Q5SW79 1584 aa28.2■■■□□ 2.11
RGPD1-205ENST00000641339 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
RGPD1-205ENST00000641339 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
RGPD1-205ENST00000641339 CUL7Q14999 1698 aa28.09■■■□□ 2.09
RGPD1-205ENST00000641339 JPH4Q96JJ6 628 aa28.01■■■□□ 2.07
RGPD1-205ENST00000641339 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms