RNA–Protein interactions for RNA: ENST00000640906.1

FRMD4A-212, Transcript of FERM domain containing 4A, humanhuman

TSL 4

Gene FRMD4A, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-212ENST00000640906 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
FRMD4A-212ENST00000640906 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
FRMD4A-212ENST00000640906 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
FRMD4A-212ENST00000640906 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
FRMD4A-212ENST00000640906 ABCC9O60706 1549 aa19.46■□□□□ 0.71
FRMD4A-212ENST00000640906 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
FRMD4A-212ENST00000640906 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
FRMD4A-212ENST00000640906 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
FRMD4A-212ENST00000640906 NACADO15069 1562 aa18.97■□□□□ 0.63
FRMD4A-212ENST00000640906 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.62
FRMD4A-212ENST00000640906 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
FRMD4A-212ENST00000640906 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
FRMD4A-212ENST00000640906 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
FRMD4A-212ENST00000640906 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
FRMD4A-212ENST00000640906 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
FRMD4A-212ENST00000640906 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
FRMD4A-212ENST00000640906 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
FRMD4A-212ENST00000640906 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
FRMD4A-212ENST00000640906 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
FRMD4A-212ENST00000640906 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
FRMD4A-212ENST00000640906 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
FRMD4A-212ENST00000640906 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
FRMD4A-212ENST00000640906 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
FRMD4A-212ENST00000640906 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
FRMD4A-212ENST00000640906 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
FRMD4A-212ENST00000640906 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
FRMD4A-212ENST00000640906 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
FRMD4A-212ENST00000640906 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
FRMD4A-212ENST00000640906 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
FRMD4A-212ENST00000640906 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
FRMD4A-212ENST00000640906 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
FRMD4A-212ENST00000640906 BAZ1BQ9UIG0 1483 aaKnown RBP17.33■□□□□ 0.37
FRMD4A-212ENST00000640906 WIZO95785 1651 aa17.28■□□□□ 0.36
FRMD4A-212ENST00000640906 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
FRMD4A-212ENST00000640906 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
FRMD4A-212ENST00000640906 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
FRMD4A-212ENST00000640906 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
FRMD4A-212ENST00000640906 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
FRMD4A-212ENST00000640906 CFTRP13569 1480 aa16.94■□□□□ 0.3
FRMD4A-212ENST00000640906 NESP48681 1621 aa16.9■□□□□ 0.3
FRMD4A-212ENST00000640906 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
FRMD4A-212ENST00000640906 FOXD1Q16676 465 aa16.83■□□□□ 0.28
FRMD4A-212ENST00000640906 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
FRMD4A-212ENST00000640906 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
FRMD4A-212ENST00000640906 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
FRMD4A-212ENST00000640906 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
FRMD4A-212ENST00000640906 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
FRMD4A-212ENST00000640906 CUX2O14529 1486 aa16.66■□□□□ 0.26
FRMD4A-212ENST00000640906 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
FRMD4A-212ENST00000640906 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
FRMD4A-212ENST00000640906 WDR62O43379 1518 aa16.6■□□□□ 0.25
FRMD4A-212ENST00000640906 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
FRMD4A-212ENST00000640906 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
FRMD4A-212ENST00000640906 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
FRMD4A-212ENST00000640906 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
FRMD4A-212ENST00000640906 CUX1P39880 1505 aa16.42■□□□□ 0.22
FRMD4A-212ENST00000640906 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
FRMD4A-212ENST00000640906 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
FRMD4A-212ENST00000640906 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
FRMD4A-212ENST00000640906 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
FRMD4A-212ENST00000640906 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
FRMD4A-212ENST00000640906 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
FRMD4A-212ENST00000640906 SOGA1O94964 1423 aa16.32■□□□□ 0.2
FRMD4A-212ENST00000640906 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
FRMD4A-212ENST00000640906 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
FRMD4A-212ENST00000640906 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
FRMD4A-212ENST00000640906 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
FRMD4A-212ENST00000640906 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
FRMD4A-212ENST00000640906 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
FRMD4A-212ENST00000640906 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
FRMD4A-212ENST00000640906 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
FRMD4A-212ENST00000640906 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
FRMD4A-212ENST00000640906 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
FRMD4A-212ENST00000640906 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
FRMD4A-212ENST00000640906 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
FRMD4A-212ENST00000640906 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
FRMD4A-212ENST00000640906 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
FRMD4A-212ENST00000640906 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
FRMD4A-212ENST00000640906 ERICH3Q5RHP9 1530 aa16.06■□□□□ 0.16
FRMD4A-212ENST00000640906 IGF1RP08069 1367 aa16.02■□□□□ 0.16
FRMD4A-212ENST00000640906 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
FRMD4A-212ENST00000640906 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
FRMD4A-212ENST00000640906 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
FRMD4A-212ENST00000640906 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
FRMD4A-212ENST00000640906 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
FRMD4A-212ENST00000640906 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
FRMD4A-212ENST00000640906 CHMP7Q8WUX9 453 aaPredicted RBP15.95■□□□□ 0.14
FRMD4A-212ENST00000640906 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
FRMD4A-212ENST00000640906 EEA1Q15075 1411 aa15.94■□□□□ 0.14
FRMD4A-212ENST00000640906 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
FRMD4A-212ENST00000640906 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
FRMD4A-212ENST00000640906 CUL7Q14999 1698 aa15.9■□□□□ 0.14
FRMD4A-212ENST00000640906 GRIN2AQ12879 1464 aa15.89■□□□□ 0.13
FRMD4A-212ENST00000640906 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
FRMD4A-212ENST00000640906 CHD1O14646 1710 aa15.88■□□□□ 0.13
FRMD4A-212ENST00000640906 FBLN2P98095 1184 aa15.87■□□□□ 0.13
FRMD4A-212ENST00000640906 NUP160Q12769 1436 aa15.86■□□□□ 0.13
FRMD4A-212ENST00000640906 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
FRMD4A-212ENST00000640906 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
FRMD4A-212ENST00000640906 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms