RNA–Protein interactions for RNA: ENST00000640819.1

PAX6-279, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 368 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-279ENST00000640819 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
PAX6-279ENST00000640819 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
PAX6-279ENST00000640819 ABCC9O60706 1549 aa30.95■■■□□ 2.55
PAX6-279ENST00000640819 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
PAX6-279ENST00000640819 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
PAX6-279ENST00000640819 NACADO15069 1562 aa29.68■■■□□ 2.34
PAX6-279ENST00000640819 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
PAX6-279ENST00000640819 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
PAX6-279ENST00000640819 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
PAX6-279ENST00000640819 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
PAX6-279ENST00000640819 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
PAX6-279ENST00000640819 SCRIBQ14160 1630 aa28.97■■■□□ 2.23
PAX6-279ENST00000640819 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
PAX6-279ENST00000640819 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
PAX6-279ENST00000640819 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
PAX6-279ENST00000640819 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
PAX6-279ENST00000640819 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
PAX6-279ENST00000640819 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
PAX6-279ENST00000640819 SMARCA4P51532 1647 aa27.63■■■□□ 2.01
PAX6-279ENST00000640819 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
PAX6-279ENST00000640819 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
PAX6-279ENST00000640819 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
PAX6-279ENST00000640819 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
PAX6-279ENST00000640819 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
PAX6-279ENST00000640819 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
PAX6-279ENST00000640819 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.96
PAX6-279ENST00000640819 WIZO95785 1651 aa27.25■■□□□ 1.95
PAX6-279ENST00000640819 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
PAX6-279ENST00000640819 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
PAX6-279ENST00000640819 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
PAX6-279ENST00000640819 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
PAX6-279ENST00000640819 NESP48681 1621 aa26.8■■□□□ 1.88
PAX6-279ENST00000640819 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
PAX6-279ENST00000640819 LAMC3Q9Y6N6 1575 aa26.65■■□□□ 1.86
PAX6-279ENST00000640819 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
PAX6-279ENST00000640819 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
PAX6-279ENST00000640819 PDS5BQ9NTI5 1447 aa26.51■■□□□ 1.83
PAX6-279ENST00000640819 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
PAX6-279ENST00000640819 CFTRP13569 1480 aa26.46■■□□□ 1.83
PAX6-279ENST00000640819 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
PAX6-279ENST00000640819 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
PAX6-279ENST00000640819 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
PAX6-279ENST00000640819 THOC2Q8NI27 1593 aaKnown RBP26.28■■□□□ 1.8
PAX6-279ENST00000640819 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
PAX6-279ENST00000640819 CUX2O14529 1486 aa26.22■■□□□ 1.79
PAX6-279ENST00000640819 WDR62O43379 1518 aa26.1■■□□□ 1.77
PAX6-279ENST00000640819 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
PAX6-279ENST00000640819 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
PAX6-279ENST00000640819 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
PAX6-279ENST00000640819 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
PAX6-279ENST00000640819 CUX1P39880 1505 aa25.78■■□□□ 1.72
PAX6-279ENST00000640819 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
PAX6-279ENST00000640819 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
PAX6-279ENST00000640819 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
PAX6-279ENST00000640819 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
PAX6-279ENST00000640819 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
PAX6-279ENST00000640819 SOGA1O94964 1423 aa25.66■■□□□ 1.7
PAX6-279ENST00000640819 ZNF608Q9ULD9 1512 aaPredicted RBP25.65■■□□□ 1.7
PAX6-279ENST00000640819 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
PAX6-279ENST00000640819 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
PAX6-279ENST00000640819 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
PAX6-279ENST00000640819 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
PAX6-279ENST00000640819 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.68
PAX6-279ENST00000640819 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
PAX6-279ENST00000640819 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
PAX6-279ENST00000640819 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
PAX6-279ENST00000640819 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
PAX6-279ENST00000640819 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
PAX6-279ENST00000640819 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
PAX6-279ENST00000640819 FBLN2P98095 1184 aa25.33■■□□□ 1.65
PAX6-279ENST00000640819 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
PAX6-279ENST00000640819 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
PAX6-279ENST00000640819 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
PAX6-279ENST00000640819 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
PAX6-279ENST00000640819 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
PAX6-279ENST00000640819 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
PAX6-279ENST00000640819 CHD1O14646 1710 aa25.22■■□□□ 1.63
PAX6-279ENST00000640819 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
PAX6-279ENST00000640819 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
PAX6-279ENST00000640819 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
PAX6-279ENST00000640819 SYNJ2O15056 1496 aa25.12■■□□□ 1.61
PAX6-279ENST00000640819 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
PAX6-279ENST00000640819 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
PAX6-279ENST00000640819 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
PAX6-279ENST00000640819 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
PAX6-279ENST00000640819 IGF1RP08069 1367 aa25■■□□□ 1.59
PAX6-279ENST00000640819 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
PAX6-279ENST00000640819 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
PAX6-279ENST00000640819 CUL7Q14999 1698 aa24.91■■□□□ 1.58
PAX6-279ENST00000640819 CARMIL1Q5VZK9 1371 aa24.9■■□□□ 1.58
PAX6-279ENST00000640819 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
PAX6-279ENST00000640819 CEP170Q5SW79 1584 aa24.86■■□□□ 1.57
PAX6-279ENST00000640819 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
PAX6-279ENST00000640819 NUP160Q12769 1436 aa24.82■■□□□ 1.56
PAX6-279ENST00000640819 RIMBP3CA6NJZ7 1639 aa24.82■■□□□ 1.56
PAX6-279ENST00000640819 RIMBP3BA6NNM3 1639 aa24.82■■□□□ 1.56
PAX6-279ENST00000640819 RIMBP3Q9UFD9 1639 aa24.82■■□□□ 1.56
PAX6-279ENST00000640819 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
PAX6-279ENST00000640819 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
PAX6-279ENST00000640819 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms