RNA–Protein interactions for RNA: ENST00000640766.1

PAX6-278, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-278ENST00000640766 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
PAX6-278ENST00000640766 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.95
PAX6-278ENST00000640766 ABCC9O60706 1549 aa27.03■■□□□ 1.92
PAX6-278ENST00000640766 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
PAX6-278ENST00000640766 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
PAX6-278ENST00000640766 NACADO15069 1562 aa25.75■■□□□ 1.71
PAX6-278ENST00000640766 MYO15BQ96JP2 1530 aa25.51■■□□□ 1.67
PAX6-278ENST00000640766 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
PAX6-278ENST00000640766 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
PAX6-278ENST00000640766 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
PAX6-278ENST00000640766 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
PAX6-278ENST00000640766 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
PAX6-278ENST00000640766 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
PAX6-278ENST00000640766 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
PAX6-278ENST00000640766 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
PAX6-278ENST00000640766 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
PAX6-278ENST00000640766 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
PAX6-278ENST00000640766 CECR2Q9BXF3 1484 aa24.33■■□□□ 1.48
PAX6-278ENST00000640766 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
PAX6-278ENST00000640766 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
PAX6-278ENST00000640766 SMARCA4P51532 1647 aa23.74■■□□□ 1.39
PAX6-278ENST00000640766 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
PAX6-278ENST00000640766 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
PAX6-278ENST00000640766 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
PAX6-278ENST00000640766 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
PAX6-278ENST00000640766 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
PAX6-278ENST00000640766 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.35
PAX6-278ENST00000640766 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
PAX6-278ENST00000640766 NESP48681 1621 aa23.28■■□□□ 1.32
PAX6-278ENST00000640766 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
PAX6-278ENST00000640766 WIZO95785 1651 aa23.26■■□□□ 1.31
PAX6-278ENST00000640766 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
PAX6-278ENST00000640766 CUX2O14529 1486 aa23.15■■□□□ 1.3
PAX6-278ENST00000640766 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
PAX6-278ENST00000640766 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
PAX6-278ENST00000640766 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
PAX6-278ENST00000640766 CFTRP13569 1480 aa22.91■■□□□ 1.26
PAX6-278ENST00000640766 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
PAX6-278ENST00000640766 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
PAX6-278ENST00000640766 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
PAX6-278ENST00000640766 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
PAX6-278ENST00000640766 MRC2Q9UBG0 1479 aa22.84■■□□□ 1.25
PAX6-278ENST00000640766 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
PAX6-278ENST00000640766 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
PAX6-278ENST00000640766 WDR62O43379 1518 aa22.71■■□□□ 1.23
PAX6-278ENST00000640766 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
PAX6-278ENST00000640766 URB2Q14146 1524 aaKnown RBP22.58■■□□□ 1.21
PAX6-278ENST00000640766 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
PAX6-278ENST00000640766 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
PAX6-278ENST00000640766 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
PAX6-278ENST00000640766 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
PAX6-278ENST00000640766 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
PAX6-278ENST00000640766 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
PAX6-278ENST00000640766 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
PAX6-278ENST00000640766 SOGA1O94964 1423 aa22.21■■□□□ 1.15
PAX6-278ENST00000640766 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.15
PAX6-278ENST00000640766 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
PAX6-278ENST00000640766 RAD54L2Q9Y4B4 1467 aa22.14■■□□□ 1.14
PAX6-278ENST00000640766 CUX1P39880 1505 aa22.12■■□□□ 1.13
PAX6-278ENST00000640766 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
PAX6-278ENST00000640766 TARBP1Q13395 1621 aaKnown RBP22.12■■□□□ 1.13
PAX6-278ENST00000640766 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
PAX6-278ENST00000640766 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
PAX6-278ENST00000640766 FBLN2P98095 1184 aa22.07■■□□□ 1.12
PAX6-278ENST00000640766 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
PAX6-278ENST00000640766 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
PAX6-278ENST00000640766 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
PAX6-278ENST00000640766 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
PAX6-278ENST00000640766 GRIN2BQ13224 1484 aa21.93■■□□□ 1.1
PAX6-278ENST00000640766 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
PAX6-278ENST00000640766 GAPVD1Q14C86 1478 aa21.89■■□□□ 1.1
PAX6-278ENST00000640766 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
PAX6-278ENST00000640766 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
PAX6-278ENST00000640766 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
PAX6-278ENST00000640766 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
PAX6-278ENST00000640766 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
PAX6-278ENST00000640766 CHD1O14646 1710 aa21.79■■□□□ 1.08
PAX6-278ENST00000640766 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
PAX6-278ENST00000640766 ARHGEF11O15085 1522 aa21.77■■□□□ 1.08
PAX6-278ENST00000640766 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
PAX6-278ENST00000640766 RIMBP3CA6NJZ7 1639 aa21.75■■□□□ 1.07
PAX6-278ENST00000640766 RIMBP3BA6NNM3 1639 aa21.75■■□□□ 1.07
PAX6-278ENST00000640766 RIMBP3Q9UFD9 1639 aa21.75■■□□□ 1.07
PAX6-278ENST00000640766 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
PAX6-278ENST00000640766 PBRM1Q86U86 1689 aa21.68■■□□□ 1.06
PAX6-278ENST00000640766 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
PAX6-278ENST00000640766 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
PAX6-278ENST00000640766 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
PAX6-278ENST00000640766 GRIN2AQ12879 1464 aa21.61■■□□□ 1.05
PAX6-278ENST00000640766 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
PAX6-278ENST00000640766 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
PAX6-278ENST00000640766 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
PAX6-278ENST00000640766 NUP160Q12769 1436 aa21.53■■□□□ 1.04
PAX6-278ENST00000640766 IGF1RP08069 1367 aa21.51■■□□□ 1.03
PAX6-278ENST00000640766 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
PAX6-278ENST00000640766 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
PAX6-278ENST00000640766 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
PAX6-278ENST00000640766 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.01
PAX6-278ENST00000640766 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
PAX6-278ENST00000640766 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms