RNA–Protein interactions for RNA: ENST00000640726.1

SLC35A3-223, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 1,636 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-223ENST00000640726 NISCHQ9Y2I1 1504 aa50.88■■■■■ 5.74
SLC35A3-223ENST00000640726 CCDC180Q9P1Z9 1646 aa44.87■■■■■ 4.77
SLC35A3-223ENST00000640726 ABCC9O60706 1549 aa43.19■■■■■ 4.5
SLC35A3-223ENST00000640726 ZCCHC6Q5VYS8 1495 aaKnown RBP42.54■■■■■ 4.4
SLC35A3-223ENST00000640726 DCAF8L2P0C7V8 631 aa42.26■■■■■ 4.36
SLC35A3-223ENST00000640726 DCAF1Q9Y4B6 1507 aa42.13■■■■■ 4.33
SLC35A3-223ENST00000640726 MYO15BQ96JP2 1530 aa42.02■■■■■ 4.32
SLC35A3-223ENST00000640726 NACADO15069 1562 aa42.02■■■■■ 4.32
SLC35A3-223ENST00000640726 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.3
SLC35A3-223ENST00000640726 SCRIBQ14160 1630 aa41.01■■■■■ 4.16
SLC35A3-223ENST00000640726 UNC13AQ9UPW8 1703 aa40.95■■■■■ 4.15
SLC35A3-223ENST00000640726 SHROOM4Q9ULL8 1493 aa40.68■■■■■ 4.1
SLC35A3-223ENST00000640726 BICRAQ9NZM4 1560 aa40.57■■■■■ 4.09
SLC35A3-223ENST00000640726 PABPN1Q86U42 306 aaKnown RBP eCLIP40.52■■■■■ 4.08
SLC35A3-223ENST00000640726 CECR2Q9BXF3 1484 aa39.55■■■■□ 3.92
SLC35A3-223ENST00000640726 EIF4G1Q04637 1599 aaKnown RBP39.46■■■■□ 3.91
SLC35A3-223ENST00000640726 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.89
SLC35A3-223ENST00000640726 SMARCA4P51532 1647 aa39.31■■■■□ 3.88
SLC35A3-223ENST00000640726 MROH2BQ7Z745 1585 aa39.23■■■■□ 3.87
SLC35A3-223ENST00000640726 CC2D2AQ9P2K1 1620 aa39.1■■■■□ 3.85
SLC35A3-223ENST00000640726 RSF1Q96T23 1441 aaPredicted RBP39.07■■■■□ 3.84
SLC35A3-223ENST00000640726 DNAJC5BQ9UF47 199 aa38.96■■■■□ 3.83
SLC35A3-223ENST00000640726 PEG3Q9GZU2 1588 aa38.92■■■■□ 3.82
SLC35A3-223ENST00000640726 ATAD2BQ9ULI0 1458 aa38.91■■■■□ 3.82
SLC35A3-223ENST00000640726 SMARCA2P51531 1590 aa38.9■■■■□ 3.82
SLC35A3-223ENST00000640726 WIZO95785 1651 aa38.84■■■■□ 3.81
SLC35A3-223ENST00000640726 NCAPD3P42695 1498 aa38.78■■■■□ 3.8
SLC35A3-223ENST00000640726 SUPT5HO00267 1087 aaKnown RBP38.7■■■■□ 3.79
SLC35A3-223ENST00000640726 HMGXB3Q12766 1538 aa38.64■■■■□ 3.78
SLC35A3-223ENST00000640726 BAZ1BQ9UIG0 1483 aaKnown RBP38.63■■■■□ 3.77
SLC35A3-223ENST00000640726 TOP2AP11388 1531 aaKnown RBP38.47■■■■□ 3.75
SLC35A3-223ENST00000640726 CCDC88BA6NC98 1476 aa38.04■■■■□ 3.68
SLC35A3-223ENST00000640726 CADPSQ9ULU8 1353 aa37.7■■■■□ 3.63
SLC35A3-223ENST00000640726 CFTRP13569 1480 aa37.63■■■■□ 3.61
SLC35A3-223ENST00000640726 LAMC3Q9Y6N6 1575 aa37.63■■■■□ 3.61
SLC35A3-223ENST00000640726 NESP48681 1621 aa37.6■■■■□ 3.61
SLC35A3-223ENST00000640726 PRDM2Q13029 1718 aa37.39■■■■□ 3.58
SLC35A3-223ENST00000640726 PDS5BQ9NTI5 1447 aa37.36■■■■□ 3.57
SLC35A3-223ENST00000640726 FANCD2Q9BXW9 1451 aa37.26■■■■□ 3.55
SLC35A3-223ENST00000640726 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
SLC35A3-223ENST00000640726 ERCC6Q03468 1493 aa37.17■■■■□ 3.54
SLC35A3-223ENST00000640726 CEP164Q9UPV0 1460 aa37.13■■■■□ 3.53
SLC35A3-223ENST00000640726 MRC2Q9UBG0 1479 aa36.91■■■■□ 3.5
SLC35A3-223ENST00000640726 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
SLC35A3-223ENST00000640726 THOC2Q8NI27 1593 aaKnown RBP36.84■■■■□ 3.49
SLC35A3-223ENST00000640726 WRNQ14191 1432 aaPredicted RBP eCLIP36.82■■■■□ 3.49
SLC35A3-223ENST00000640726 URB2Q14146 1524 aaKnown RBP36.82■■■■□ 3.48
SLC35A3-223ENST00000640726 DNMBPQ6XZF7 1577 aa36.76■■■■□ 3.47
SLC35A3-223ENST00000640726 WDR62O43379 1518 aa36.76■■■■□ 3.47
SLC35A3-223ENST00000640726 CUX1P39880 1505 aa36.75■■■■□ 3.47
SLC35A3-223ENST00000640726 TOPBP1Q92547 1522 aa36.74■■■■□ 3.47
SLC35A3-223ENST00000640726 SYNJ1O43426 1573 aa36.66■■■■□ 3.46
SLC35A3-223ENST00000640726 TOP2BQ02880 1626 aa36.64■■■■□ 3.46
SLC35A3-223ENST00000640726 BIVM-ERCC5R4GMW8 1640 aa36.62■■■■□ 3.45
SLC35A3-223ENST00000640726 CHIC1Q5VXU3 224 aa36.57■■■■□ 3.44
SLC35A3-223ENST00000640726 TRIM41Q8WV44 630 aa36.52■■■■□ 3.44
SLC35A3-223ENST00000640726 FGD5Q6ZNL6 1462 aa36.51■■■■□ 3.44
SLC35A3-223ENST00000640726 CUX2O14529 1486 aa36.48■■■■□ 3.43
SLC35A3-223ENST00000640726 POLA1P09884 1462 aaPredicted RBP36.48■■■■□ 3.43
SLC35A3-223ENST00000640726 SOGA1O94964 1423 aa36.36■■■■□ 3.41
SLC35A3-223ENST00000640726 IFT140Q96RY7 1462 aa36.32■■■■□ 3.4
SLC35A3-223ENST00000640726 RAD54L2Q9Y4B4 1467 aa36.32■■■■□ 3.4
SLC35A3-223ENST00000640726 TARBP1Q13395 1621 aaKnown RBP36.28■■■■□ 3.4
SLC35A3-223ENST00000640726 ABCA10Q8WWZ4 1543 aa36.2■■■■□ 3.39
SLC35A3-223ENST00000640726 WDR97A6NE52 1622 aa36.15■■■■□ 3.38
SLC35A3-223ENST00000640726 ZNF608Q9ULD9 1512 aaPredicted RBP36.09■■■■□ 3.37
SLC35A3-223ENST00000640726 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
SLC35A3-223ENST00000640726 AQRO60306 1485 aaKnown RBP eCLIP36.01■■■■□ 3.35
SLC35A3-223ENST00000640726 KIF27Q86VH2 1401 aa36■■■■□ 3.35
SLC35A3-223ENST00000640726 EIF4G3O43432 1585 aaKnown RBP35.97■■■■□ 3.35
SLC35A3-223ENST00000640726 ABCA5Q8WWZ7 1642 aa35.96■■■■□ 3.35
SLC35A3-223ENST00000640726 GAPVD1Q14C86 1478 aa35.95■■■■□ 3.35
SLC35A3-223ENST00000640726 RUSC2Q8N2Y8 1516 aa35.9■■■■□ 3.34
SLC35A3-223ENST00000640726 GRIN2BQ13224 1484 aa35.83■■■■□ 3.33
SLC35A3-223ENST00000640726 EEA1Q15075 1411 aa35.82■■■■□ 3.32
SLC35A3-223ENST00000640726 PBRM1Q86U86 1689 aa35.81■■■■□ 3.32
SLC35A3-223ENST00000640726 ERICH3Q5RHP9 1530 aa35.78■■■■□ 3.32
SLC35A3-223ENST00000640726 IGF1RP08069 1367 aa35.76■■■■□ 3.32
SLC35A3-223ENST00000640726 FAM9AQ8IZU1 332 aaPredicted RBP35.74■■■■□ 3.31
SLC35A3-223ENST00000640726 CSRNP3Q8WYN3 585 aa35.68■■■■□ 3.3
SLC35A3-223ENST00000640726 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
SLC35A3-223ENST00000640726 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
SLC35A3-223ENST00000640726 CUL7Q14999 1698 aa35.6■■■■□ 3.29
SLC35A3-223ENST00000640726 FHAD1B1AJZ9 1412 aa35.56■■■■□ 3.28
SLC35A3-223ENST00000640726 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
SLC35A3-223ENST00000640726 CARMIL1Q5VZK9 1371 aa35.56■■■■□ 3.28
SLC35A3-223ENST00000640726 SYNJ2O15056 1496 aa35.51■■■■□ 3.28
SLC35A3-223ENST00000640726 PRXQ9BXM0 1461 aa35.49■■■■□ 3.27
SLC35A3-223ENST00000640726 CHMP7Q8WUX9 453 aaPredicted RBP35.47■■■■□ 3.27
SLC35A3-223ENST00000640726 FBLN2P98095 1184 aa35.45■■■■□ 3.27
SLC35A3-223ENST00000640726 RAPGEF2Q9Y4G8 1499 aa35.43■■■■□ 3.26
SLC35A3-223ENST00000640726 CHD1O14646 1710 aa35.38■■■■□ 3.25
SLC35A3-223ENST00000640726 GRIN2AQ12879 1464 aa35.38■■■■□ 3.25
SLC35A3-223ENST00000640726 KIF21BO75037 1637 aa35.37■■■■□ 3.25
SLC35A3-223ENST00000640726 GOLGA3Q08378 1498 aa35.24■■■■□ 3.23
SLC35A3-223ENST00000640726 EHMT2Q96KQ7 1210 aa35.21■■■■□ 3.23
SLC35A3-223ENST00000640726 NUP160Q12769 1436 aa35.18■■■■□ 3.22
SLC35A3-223ENST00000640726 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
SLC35A3-223ENST00000640726 CEP170Q5SW79 1584 aa35.15■■■■□ 3.22
SLC35A3-223ENST00000640726 UBTFP17480 764 aaKnown RBP35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms