RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 NISCHQ9Y2I1 1504 aa33.76■■■■□ 3
SPIN3-242ENST00000640577 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
SPIN3-242ENST00000640577 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
SPIN3-242ENST00000640577 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.1
SPIN3-242ENST00000640577 DCAF8L2P0C7V8 631 aa27.94■■■□□ 2.06
SPIN3-242ENST00000640577 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.04
SPIN3-242ENST00000640577 ABCC9O60706 1549 aa27.35■■□□□ 1.97
SPIN3-242ENST00000640577 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
SPIN3-242ENST00000640577 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
SPIN3-242ENST00000640577 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
SPIN3-242ENST00000640577 NACADO15069 1562 aa26.99■■□□□ 1.91
SPIN3-242ENST00000640577 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
SPIN3-242ENST00000640577 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
SPIN3-242ENST00000640577 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
SPIN3-242ENST00000640577 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
SPIN3-242ENST00000640577 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
SPIN3-242ENST00000640577 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
SPIN3-242ENST00000640577 WIZO95785 1651 aa26.04■■□□□ 1.76
SPIN3-242ENST00000640577 BICRAQ9NZM4 1560 aa26.03■■□□□ 1.76
SPIN3-242ENST00000640577 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
SPIN3-242ENST00000640577 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
SPIN3-242ENST00000640577 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
SPIN3-242ENST00000640577 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
SPIN3-242ENST00000640577 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
SPIN3-242ENST00000640577 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
SPIN3-242ENST00000640577 EIF4G1Q04637 1599 aaKnown RBP25.47■■□□□ 1.67
SPIN3-242ENST00000640577 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
SPIN3-242ENST00000640577 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
SPIN3-242ENST00000640577 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
SPIN3-242ENST00000640577 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
SPIN3-242ENST00000640577 FAM9AQ8IZU1 332 aaPredicted RBP25.2■■□□□ 1.62
SPIN3-242ENST00000640577 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
SPIN3-242ENST00000640577 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
SPIN3-242ENST00000640577 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
SPIN3-242ENST00000640577 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
SPIN3-242ENST00000640577 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
SPIN3-242ENST00000640577 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
SPIN3-242ENST00000640577 SOGA1O94964 1423 aa24.8■■□□□ 1.56
SPIN3-242ENST00000640577 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
SPIN3-242ENST00000640577 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
SPIN3-242ENST00000640577 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
SPIN3-242ENST00000640577 CC2D2AQ9P2K1 1620 aa24.7■■□□□ 1.54
SPIN3-242ENST00000640577 CFTRP13569 1480 aa24.58■■□□□ 1.53
SPIN3-242ENST00000640577 EEA1Q15075 1411 aa24.56■■□□□ 1.52
SPIN3-242ENST00000640577 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
SPIN3-242ENST00000640577 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
SPIN3-242ENST00000640577 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
SPIN3-242ENST00000640577 CUX1P39880 1505 aa24.45■■□□□ 1.5
SPIN3-242ENST00000640577 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
SPIN3-242ENST00000640577 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
SPIN3-242ENST00000640577 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
SPIN3-242ENST00000640577 TNIKQ9UKE5 1360 aa24.38■■□□□ 1.49
SPIN3-242ENST00000640577 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
SPIN3-242ENST00000640577 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
SPIN3-242ENST00000640577 UBTFP17480 764 aaKnown RBP24.33■■□□□ 1.49
SPIN3-242ENST00000640577 KIF21BO75037 1637 aa24.32■■□□□ 1.48
SPIN3-242ENST00000640577 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
SPIN3-242ENST00000640577 HRCP23327 699 aa24.29■■□□□ 1.48
SPIN3-242ENST00000640577 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
SPIN3-242ENST00000640577 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
SPIN3-242ENST00000640577 DNAJC5BQ9UF47 199 aa24.22■■□□□ 1.47
SPIN3-242ENST00000640577 NESP48681 1621 aa24.21■■□□□ 1.47
SPIN3-242ENST00000640577 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
SPIN3-242ENST00000640577 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
SPIN3-242ENST00000640577 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
SPIN3-242ENST00000640577 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
SPIN3-242ENST00000640577 ERICH3Q5RHP9 1530 aa24.04■■□□□ 1.44
SPIN3-242ENST00000640577 CLIP1P30622 1438 aa24.04■■□□□ 1.44
SPIN3-242ENST00000640577 CUX2O14529 1486 aa24.01■■□□□ 1.43
SPIN3-242ENST00000640577 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
SPIN3-242ENST00000640577 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
SPIN3-242ENST00000640577 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
SPIN3-242ENST00000640577 TTBK1Q5TCY1 1321 aaPredicted RBP23.97■■□□□ 1.43
SPIN3-242ENST00000640577 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
SPIN3-242ENST00000640577 IGF1RP08069 1367 aa23.93■■□□□ 1.42
SPIN3-242ENST00000640577 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
SPIN3-242ENST00000640577 POLA1P09884 1462 aaPredicted RBP23.9■■□□□ 1.42
SPIN3-242ENST00000640577 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.41
SPIN3-242ENST00000640577 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
SPIN3-242ENST00000640577 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
SPIN3-242ENST00000640577 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
SPIN3-242ENST00000640577 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
SPIN3-242ENST00000640577 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
SPIN3-242ENST00000640577 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
SPIN3-242ENST00000640577 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
SPIN3-242ENST00000640577 ARHGAP35Q9NRY4 1499 aa23.69■■□□□ 1.38
SPIN3-242ENST00000640577 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
SPIN3-242ENST00000640577 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
SPIN3-242ENST00000640577 APLP2Q06481 763 aa23.59■■□□□ 1.37
SPIN3-242ENST00000640577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
SPIN3-242ENST00000640577 CUL7Q14999 1698 aa23.58■■□□□ 1.37
SPIN3-242ENST00000640577 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.36
SPIN3-242ENST00000640577 ZEB1P37275 1124 aaPredicted RBP23.54■■□□□ 1.36
SPIN3-242ENST00000640577 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
SPIN3-242ENST00000640577 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
SPIN3-242ENST00000640577 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
SPIN3-242ENST00000640577 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
SPIN3-242ENST00000640577 CCER1Q8TC90 406 aaPredicted RBP23.43■■□□□ 1.34
SPIN3-242ENST00000640577 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
SPIN3-242ENST00000640577 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms