RNA–Protein interactions for RNA: ENST00000640530.1

ME2-217, Transcript of malic enzyme 2, humanhuman

TSL 5

Gene ME2, Length 2,426 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME2-217ENST00000640530 NISCHQ9Y2I1 1504 aa44.82■■■■■ 4.77
ME2-217ENST00000640530 CCDC180Q9P1Z9 1646 aa38.43■■■■□ 3.74
ME2-217ENST00000640530 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
ME2-217ENST00000640530 SHROOM4Q9ULL8 1493 aa37.6■■■■□ 3.61
ME2-217ENST00000640530 DCAF8L2P0C7V8 631 aa37.25■■■■□ 3.55
ME2-217ENST00000640530 DCAF1Q9Y4B6 1507 aa36.83■■■■□ 3.49
ME2-217ENST00000640530 SUPT5HO00267 1087 aaKnown RBP36.59■■■■□ 3.45
ME2-217ENST00000640530 ABCC9O60706 1549 aa36.09■■■■□ 3.37
ME2-217ENST00000640530 MYO15BQ96JP2 1530 aa36.03■■■■□ 3.36
ME2-217ENST00000640530 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
ME2-217ENST00000640530 NACADO15069 1562 aa35.7■■■■□ 3.31
ME2-217ENST00000640530 CHIC1Q5VXU3 224 aa35.31■■■■□ 3.24
ME2-217ENST00000640530 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
ME2-217ENST00000640530 RSF1Q96T23 1441 aaPredicted RBP35.2■■■■□ 3.23
ME2-217ENST00000640530 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
ME2-217ENST00000640530 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
ME2-217ENST00000640530 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
ME2-217ENST00000640530 WIZO95785 1651 aa34.54■■■■□ 3.12
ME2-217ENST00000640530 BAZ1AQ9NRL2 1556 aaPredicted RBP34.47■■■■□ 3.11
ME2-217ENST00000640530 PABPN1Q86U42 306 aaKnown RBP eCLIP34.38■■■■□ 3.09
ME2-217ENST00000640530 BICRAQ9NZM4 1560 aa34.3■■■■□ 3.08
ME2-217ENST00000640530 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
ME2-217ENST00000640530 LOC105371045A0A1W2PR82 267 aa34.2■■■■□ 3.07
ME2-217ENST00000640530 TRIM41Q8WV44 630 aa34.18■■■■□ 3.06
ME2-217ENST00000640530 TOP2AP11388 1531 aaKnown RBP34.03■■■■□ 3.04
ME2-217ENST00000640530 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
ME2-217ENST00000640530 FAM9AQ8IZU1 332 aaPredicted RBP33.81■■■■□ 3
ME2-217ENST00000640530 SMARCA2P51531 1590 aa33.81■■■■□ 3
ME2-217ENST00000640530 EIF4G1Q04637 1599 aaKnown RBP33.81■■■■□ 3
ME2-217ENST00000640530 PEG3Q9GZU2 1588 aa33.67■■■□□ 2.98
ME2-217ENST00000640530 ATAD2BQ9ULI0 1458 aa33.55■■■□□ 2.96
ME2-217ENST00000640530 ABCC8Q09428 1581 aa33.51■■■□□ 2.96
ME2-217ENST00000640530 EHMT2Q96KQ7 1210 aa33.49■■■□□ 2.95
ME2-217ENST00000640530 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
ME2-217ENST00000640530 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
ME2-217ENST00000640530 SOGA1O94964 1423 aa33.09■■■□□ 2.89
ME2-217ENST00000640530 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.89
ME2-217ENST00000640530 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
ME2-217ENST00000640530 TRIM26Q12899 539 aaPredicted RBP33.04■■■□□ 2.88
ME2-217ENST00000640530 HRCP23327 699 aa33.02■■■□□ 2.88
ME2-217ENST00000640530 HMGXB3Q12766 1538 aa32.96■■■□□ 2.87
ME2-217ENST00000640530 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
ME2-217ENST00000640530 SYNJ1O43426 1573 aa32.91■■■□□ 2.86
ME2-217ENST00000640530 CSRNP3Q8WYN3 585 aa32.88■■■□□ 2.85
ME2-217ENST00000640530 EEA1Q15075 1411 aa32.85■■■□□ 2.85
ME2-217ENST00000640530 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
ME2-217ENST00000640530 PPARGC1BQ86YN6 1023 aaKnown RBP32.65■■■□□ 2.82
ME2-217ENST00000640530 UBTFP17480 764 aaKnown RBP32.64■■■□□ 2.82
ME2-217ENST00000640530 CEP162Q5TB80 1403 aa32.61■■■□□ 2.81
ME2-217ENST00000640530 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
ME2-217ENST00000640530 CFTRP13569 1480 aa32.58■■■□□ 2.81
ME2-217ENST00000640530 GOLGA3Q08378 1498 aa32.56■■■□□ 2.8
ME2-217ENST00000640530 CC2D2AQ9P2K1 1620 aa32.52■■■□□ 2.8
ME2-217ENST00000640530 BIVM-ERCC5R4GMW8 1640 aa32.49■■■□□ 2.79
ME2-217ENST00000640530 CEP164Q9UPV0 1460 aa32.46■■■□□ 2.79
ME2-217ENST00000640530 CUX1P39880 1505 aa32.43■■■□□ 2.78
ME2-217ENST00000640530 KIF21BO75037 1637 aa32.41■■■□□ 2.78
ME2-217ENST00000640530 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
ME2-217ENST00000640530 RAPGEF2Q9Y4G8 1499 aa32.32■■■□□ 2.76
ME2-217ENST00000640530 PRDM2Q13029 1718 aa32.24■■■□□ 2.75
ME2-217ENST00000640530 TTBK1Q5TCY1 1321 aaPredicted RBP32.23■■■□□ 2.75
ME2-217ENST00000640530 CLIP1P30622 1438 aa32.16■■■□□ 2.74
ME2-217ENST00000640530 KIF27Q86VH2 1401 aa32.13■■■□□ 2.73
ME2-217ENST00000640530 PRXQ9BXM0 1461 aa32.12■■■□□ 2.73
ME2-217ENST00000640530 RANGAP1P46060 587 aaPredicted RBP32.1■■■□□ 2.73
ME2-217ENST00000640530 ERICH3Q5RHP9 1530 aa32.02■■■□□ 2.72
ME2-217ENST00000640530 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
ME2-217ENST00000640530 ZEB1P37275 1124 aaPredicted RBP32■■■□□ 2.71
ME2-217ENST00000640530 NESP48681 1621 aa31.97■■■□□ 2.71
ME2-217ENST00000640530 FGD5Q6ZNL6 1462 aa31.95■■■□□ 2.71
ME2-217ENST00000640530 VPS8Q8N3P4 1428 aa31.94■■■□□ 2.7
ME2-217ENST00000640530 CUX2O14529 1486 aa31.94■■■□□ 2.7
ME2-217ENST00000640530 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
ME2-217ENST00000640530 IGF1RP08069 1367 aa31.86■■■□□ 2.69
ME2-217ENST00000640530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.83■■■□□ 2.69
ME2-217ENST00000640530 APLP2Q06481 763 aa31.75■■■□□ 2.67
ME2-217ENST00000640530 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
ME2-217ENST00000640530 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
ME2-217ENST00000640530 ARAP1Q96P48 1450 aa31.73■■■□□ 2.67
ME2-217ENST00000640530 LAMC3Q9Y6N6 1575 aa31.71■■■□□ 2.67
ME2-217ENST00000640530 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.67
ME2-217ENST00000640530 CCER1Q8TC90 406 aaPredicted RBP31.7■■■□□ 2.67
ME2-217ENST00000640530 CARMIL1Q5VZK9 1371 aa31.69■■■□□ 2.66
ME2-217ENST00000640530 POLA1P09884 1462 aaPredicted RBP31.67■■■□□ 2.66
ME2-217ENST00000640530 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
ME2-217ENST00000640530 URB2Q14146 1524 aaKnown RBP31.58■■■□□ 2.65
ME2-217ENST00000640530 ARHGAP35Q9NRY4 1499 aa31.58■■■□□ 2.65
ME2-217ENST00000640530 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
ME2-217ENST00000640530 HNRNPUL2Q1KMD3 747 aaKnown RBP31.49■■■□□ 2.63
ME2-217ENST00000640530 KANK4Q5T7N3 995 aaPredicted RBP31.48■■■□□ 2.63
ME2-217ENST00000640530 KIF21AQ7Z4S6 1674 aa31.4■■■□□ 2.62
ME2-217ENST00000640530 TDRD9Q8NDG6 1382 aaKnown RBP31.37■■■□□ 2.61
ME2-217ENST00000640530 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
ME2-217ENST00000640530 P3H3Q8IVL6 736 aa31.28■■■□□ 2.6
ME2-217ENST00000640530 CUL7Q14999 1698 aa31.28■■■□□ 2.6
ME2-217ENST00000640530 GAPVD1Q14C86 1478 aa31.24■■■□□ 2.59
ME2-217ENST00000640530 ABCA5Q8WWZ7 1642 aa31.22■■■□□ 2.59
ME2-217ENST00000640530 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
ME2-217ENST00000640530 FHOD3Q2V2M9 1422 aa31.12■■■□□ 2.57
ME2-217ENST00000640530 FHAD1B1AJZ9 1412 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms