RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
PAX6-271ENST00000640431 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
PAX6-271ENST00000640431 ABCC9O60706 1549 aa29.39■■■□□ 2.3
PAX6-271ENST00000640431 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
PAX6-271ENST00000640431 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
PAX6-271ENST00000640431 NACADO15069 1562 aa28.21■■■□□ 2.11
PAX6-271ENST00000640431 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
PAX6-271ENST00000640431 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
PAX6-271ENST00000640431 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
PAX6-271ENST00000640431 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
PAX6-271ENST00000640431 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
PAX6-271ENST00000640431 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
PAX6-271ENST00000640431 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
PAX6-271ENST00000640431 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
PAX6-271ENST00000640431 DNAJC5BQ9UF47 199 aa26.75■■□□□ 1.87
PAX6-271ENST00000640431 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
PAX6-271ENST00000640431 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
PAX6-271ENST00000640431 CC2D2AQ9P2K1 1620 aa26.52■■□□□ 1.84
PAX6-271ENST00000640431 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
PAX6-271ENST00000640431 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
PAX6-271ENST00000640431 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
PAX6-271ENST00000640431 BAZ1AQ9NRL2 1556 aaPredicted RBP26.39■■□□□ 1.82
PAX6-271ENST00000640431 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
PAX6-271ENST00000640431 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
PAX6-271ENST00000640431 WIZO95785 1651 aa26.2■■□□□ 1.78
PAX6-271ENST00000640431 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
PAX6-271ENST00000640431 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
PAX6-271ENST00000640431 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
PAX6-271ENST00000640431 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
PAX6-271ENST00000640431 HMGXB3Q12766 1538 aa25.95■■□□□ 1.75
PAX6-271ENST00000640431 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
PAX6-271ENST00000640431 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
PAX6-271ENST00000640431 NESP48681 1621 aa25.58■■□□□ 1.68
PAX6-271ENST00000640431 CCDC88BA6NC98 1476 aa25.57■■□□□ 1.68
PAX6-271ENST00000640431 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
PAX6-271ENST00000640431 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
PAX6-271ENST00000640431 CFTRP13569 1480 aa25.29■■□□□ 1.64
PAX6-271ENST00000640431 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
PAX6-271ENST00000640431 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
PAX6-271ENST00000640431 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
PAX6-271ENST00000640431 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
PAX6-271ENST00000640431 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
PAX6-271ENST00000640431 CEP164Q9UPV0 1460 aa25.03■■□□□ 1.6
PAX6-271ENST00000640431 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
PAX6-271ENST00000640431 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
PAX6-271ENST00000640431 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
PAX6-271ENST00000640431 HRCP23327 699 aa24.91■■□□□ 1.58
PAX6-271ENST00000640431 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
PAX6-271ENST00000640431 PCGF6Q9BYE7 350 aa24.88■■□□□ 1.57
PAX6-271ENST00000640431 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
PAX6-271ENST00000640431 WDR62O43379 1518 aa24.81■■□□□ 1.56
PAX6-271ENST00000640431 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
PAX6-271ENST00000640431 CUX1P39880 1505 aa24.76■■□□□ 1.55
PAX6-271ENST00000640431 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
PAX6-271ENST00000640431 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
PAX6-271ENST00000640431 CUX2O14529 1486 aa24.68■■□□□ 1.54
PAX6-271ENST00000640431 WRNQ14191 1432 aaPredicted RBP eCLIP24.67■■□□□ 1.54
PAX6-271ENST00000640431 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
PAX6-271ENST00000640431 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
PAX6-271ENST00000640431 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
PAX6-271ENST00000640431 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.53
PAX6-271ENST00000640431 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
PAX6-271ENST00000640431 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
PAX6-271ENST00000640431 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
PAX6-271ENST00000640431 SOGA1O94964 1423 aa24.48■■□□□ 1.51
PAX6-271ENST00000640431 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
PAX6-271ENST00000640431 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
PAX6-271ENST00000640431 IFT140Q96RY7 1462 aa24.44■■□□□ 1.5
PAX6-271ENST00000640431 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
PAX6-271ENST00000640431 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
PAX6-271ENST00000640431 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.49
PAX6-271ENST00000640431 PPARGC1BQ86YN6 1023 aaKnown RBP24.35■■□□□ 1.49
PAX6-271ENST00000640431 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
PAX6-271ENST00000640431 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
PAX6-271ENST00000640431 ABCA10Q8WWZ4 1543 aa24.29■■□□□ 1.48
PAX6-271ENST00000640431 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
PAX6-271ENST00000640431 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.47
PAX6-271ENST00000640431 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
PAX6-271ENST00000640431 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
PAX6-271ENST00000640431 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
PAX6-271ENST00000640431 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
PAX6-271ENST00000640431 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
PAX6-271ENST00000640431 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
PAX6-271ENST00000640431 FBLN2P98095 1184 aa24.06■■□□□ 1.44
PAX6-271ENST00000640431 IGF1RP08069 1367 aa24■■□□□ 1.43
PAX6-271ENST00000640431 CHD1O14646 1710 aa23.99■■□□□ 1.43
PAX6-271ENST00000640431 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
PAX6-271ENST00000640431 MAGI1Q96QZ7 1491 aaPredicted RBP23.96■■□□□ 1.43
PAX6-271ENST00000640431 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
PAX6-271ENST00000640431 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
PAX6-271ENST00000640431 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
PAX6-271ENST00000640431 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
PAX6-271ENST00000640431 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
PAX6-271ENST00000640431 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
PAX6-271ENST00000640431 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
PAX6-271ENST00000640431 CUL7Q14999 1698 aa23.82■■□□□ 1.4
PAX6-271ENST00000640431 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
PAX6-271ENST00000640431 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
PAX6-271ENST00000640431 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
PAX6-271ENST00000640431 PRXQ9BXM0 1461 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms