RNA–Protein interactions for RNA: ENST00000639950.1

PAX6-262, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-262ENST00000639950 NISCHQ9Y2I1 1504 aa41.21■■■■■ 4.19
PAX6-262ENST00000639950 CCDC180Q9P1Z9 1646 aa35.42■■■■□ 3.26
PAX6-262ENST00000639950 ZCCHC6Q5VYS8 1495 aaKnown RBP34.74■■■■□ 3.15
PAX6-262ENST00000639950 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
PAX6-262ENST00000639950 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
PAX6-262ENST00000639950 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
PAX6-262ENST00000639950 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
PAX6-262ENST00000639950 ABCC9O60706 1549 aa33.29■■■□□ 2.92
PAX6-262ENST00000639950 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
PAX6-262ENST00000639950 SCRIBQ14160 1630 aa33.03■■■□□ 2.88
PAX6-262ENST00000639950 NACADO15069 1562 aa32.85■■■□□ 2.85
PAX6-262ENST00000639950 RB1CC1Q8TDY2 1594 aa32.46■■■□□ 2.79
PAX6-262ENST00000639950 RSF1Q96T23 1441 aaPredicted RBP32.32■■■□□ 2.76
PAX6-262ENST00000639950 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
PAX6-262ENST00000639950 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
PAX6-262ENST00000639950 UNC13AQ9UPW8 1703 aa32.07■■■□□ 2.72
PAX6-262ENST00000639950 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.72
PAX6-262ENST00000639950 WIZO95785 1651 aa31.82■■■□□ 2.68
PAX6-262ENST00000639950 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
PAX6-262ENST00000639950 BICRAQ9NZM4 1560 aa31.66■■■□□ 2.66
PAX6-262ENST00000639950 PABPN1Q86U42 306 aaKnown RBP eCLIP31.66■■■□□ 2.66
PAX6-262ENST00000639950 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
PAX6-262ENST00000639950 TOP2AP11388 1531 aaKnown RBP31.3■■■□□ 2.6
PAX6-262ENST00000639950 LOC105371045A0A1W2PR82 267 aa31.29■■■□□ 2.6
PAX6-262ENST00000639950 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
PAX6-262ENST00000639950 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
PAX6-262ENST00000639950 CCDC88BA6NC98 1476 aa31.13■■■□□ 2.57
PAX6-262ENST00000639950 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
PAX6-262ENST00000639950 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
PAX6-262ENST00000639950 FAM9AQ8IZU1 332 aaPredicted RBP30.97■■■□□ 2.55
PAX6-262ENST00000639950 ATAD2BQ9ULI0 1458 aa30.87■■■□□ 2.53
PAX6-262ENST00000639950 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
PAX6-262ENST00000639950 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
PAX6-262ENST00000639950 EHMT2Q96KQ7 1210 aa30.71■■■□□ 2.51
PAX6-262ENST00000639950 PCGF6Q9BYE7 350 aa30.52■■■□□ 2.48
PAX6-262ENST00000639950 NCAPD3P42695 1498 aa30.39■■■□□ 2.46
PAX6-262ENST00000639950 SOGA1O94964 1423 aa30.38■■■□□ 2.45
PAX6-262ENST00000639950 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
PAX6-262ENST00000639950 WRNQ14191 1432 aaPredicted RBP eCLIP30.36■■■□□ 2.45
PAX6-262ENST00000639950 SYNJ1O43426 1573 aa30.31■■■□□ 2.44
PAX6-262ENST00000639950 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
PAX6-262ENST00000639950 TRIM26Q12899 539 aaPredicted RBP30.11■■■□□ 2.41
PAX6-262ENST00000639950 CSRNP3Q8WYN3 585 aa30.08■■■□□ 2.41
PAX6-262ENST00000639950 EEA1Q15075 1411 aa30.07■■■□□ 2.4
PAX6-262ENST00000639950 HRCP23327 699 aa30.06■■■□□ 2.4
PAX6-262ENST00000639950 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
PAX6-262ENST00000639950 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
PAX6-262ENST00000639950 CFTRP13569 1480 aa29.96■■■□□ 2.39
PAX6-262ENST00000639950 BIVM-ERCC5R4GMW8 1640 aa29.91■■■□□ 2.38
PAX6-262ENST00000639950 PPARGC1BQ86YN6 1023 aaKnown RBP29.91■■■□□ 2.38
PAX6-262ENST00000639950 CEP162Q5TB80 1403 aa29.89■■■□□ 2.38
PAX6-262ENST00000639950 TNIKQ9UKE5 1360 aa29.89■■■□□ 2.38
PAX6-262ENST00000639950 UBTFP17480 764 aaKnown RBP29.86■■■□□ 2.37
PAX6-262ENST00000639950 GOLGA3Q08378 1498 aa29.85■■■□□ 2.37
PAX6-262ENST00000639950 CUX1P39880 1505 aa29.85■■■□□ 2.37
PAX6-262ENST00000639950 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
PAX6-262ENST00000639950 KIF21BO75037 1637 aa29.77■■■□□ 2.36
PAX6-262ENST00000639950 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
PAX6-262ENST00000639950 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
PAX6-262ENST00000639950 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
PAX6-262ENST00000639950 TTBK1Q5TCY1 1321 aaPredicted RBP29.54■■■□□ 2.32
PAX6-262ENST00000639950 NESP48681 1621 aa29.5■■■□□ 2.31
PAX6-262ENST00000639950 PRXQ9BXM0 1461 aa29.47■■■□□ 2.31
PAX6-262ENST00000639950 CLIP1P30622 1438 aa29.47■■■□□ 2.31
PAX6-262ENST00000639950 KIF27Q86VH2 1401 aa29.46■■■□□ 2.31
PAX6-262ENST00000639950 FANCD2Q9BXW9 1451 aa29.46■■■□□ 2.31
PAX6-262ENST00000639950 RANGAP1P46060 587 aaPredicted RBP29.45■■■□□ 2.31
PAX6-262ENST00000639950 DNAJC5BQ9UF47 199 aa29.45■■■□□ 2.31
PAX6-262ENST00000639950 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
PAX6-262ENST00000639950 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
PAX6-262ENST00000639950 CUX2O14529 1486 aa29.35■■■□□ 2.29
PAX6-262ENST00000639950 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
PAX6-262ENST00000639950 IGF1RP08069 1367 aa29.23■■■□□ 2.27
PAX6-262ENST00000639950 DNMBPQ6XZF7 1577 aa29.23■■■□□ 2.27
PAX6-262ENST00000639950 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
PAX6-262ENST00000639950 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
PAX6-262ENST00000639950 RAD54L2Q9Y4B4 1467 aa29.19■■■□□ 2.26
PAX6-262ENST00000639950 POLA1P09884 1462 aaPredicted RBP29.15■■■□□ 2.26
PAX6-262ENST00000639950 ARAP1Q96P48 1450 aa29.15■■■□□ 2.26
PAX6-262ENST00000639950 URB2Q14146 1524 aaKnown RBP29.11■■■□□ 2.25
PAX6-262ENST00000639950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.08■■■□□ 2.25
PAX6-262ENST00000639950 CARMIL1Q5VZK9 1371 aa29.08■■■□□ 2.25
PAX6-262ENST00000639950 ZEB1P37275 1124 aaPredicted RBP29.06■■■□□ 2.24
PAX6-262ENST00000639950 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
PAX6-262ENST00000639950 KIF21AQ7Z4S6 1674 aa29.03■■■□□ 2.24
PAX6-262ENST00000639950 ARHGAP35Q9NRY4 1499 aa29■■■□□ 2.23
PAX6-262ENST00000639950 PDS5BQ9NTI5 1447 aa28.99■■■□□ 2.23
PAX6-262ENST00000639950 APLP2Q06481 763 aa28.98■■■□□ 2.23
PAX6-262ENST00000639950 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
PAX6-262ENST00000639950 CCER1Q8TC90 406 aaPredicted RBP28.9■■■□□ 2.22
PAX6-262ENST00000639950 KANK4Q5T7N3 995 aaPredicted RBP28.85■■■□□ 2.21
PAX6-262ENST00000639950 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
PAX6-262ENST00000639950 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
PAX6-262ENST00000639950 ABCA5Q8WWZ7 1642 aa28.78■■■□□ 2.2
PAX6-262ENST00000639950 CUL7Q14999 1698 aa28.78■■■□□ 2.2
PAX6-262ENST00000639950 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
PAX6-262ENST00000639950 TARBP1Q13395 1621 aaKnown RBP28.71■■■□□ 2.19
PAX6-262ENST00000639950 P3H3Q8IVL6 736 aa28.7■■■□□ 2.19
PAX6-262ENST00000639950 CTTNBP2Q8WZ74 1663 aa28.65■■■□□ 2.18
PAX6-262ENST00000639950 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms