RNA–Protein interactions for RNA: ENST00000639778.1

STRADA-239, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-239ENST00000639778 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
STRADA-239ENST00000639778 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
STRADA-239ENST00000639778 ABCC9O60706 1549 aa23.21■■□□□ 1.31
STRADA-239ENST00000639778 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
STRADA-239ENST00000639778 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
STRADA-239ENST00000639778 NACADO15069 1562 aa22.08■■□□□ 1.12
STRADA-239ENST00000639778 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
STRADA-239ENST00000639778 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
STRADA-239ENST00000639778 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
STRADA-239ENST00000639778 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
STRADA-239ENST00000639778 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
STRADA-239ENST00000639778 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
STRADA-239ENST00000639778 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
STRADA-239ENST00000639778 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
STRADA-239ENST00000639778 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
STRADA-239ENST00000639778 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
STRADA-239ENST00000639778 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
STRADA-239ENST00000639778 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
STRADA-239ENST00000639778 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
STRADA-239ENST00000639778 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
STRADA-239ENST00000639778 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
STRADA-239ENST00000639778 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
STRADA-239ENST00000639778 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
STRADA-239ENST00000639778 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
STRADA-239ENST00000639778 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
STRADA-239ENST00000639778 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
STRADA-239ENST00000639778 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
STRADA-239ENST00000639778 WIZO95785 1651 aa20.17■□□□□ 0.82
STRADA-239ENST00000639778 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
STRADA-239ENST00000639778 NESP48681 1621 aa20.06■□□□□ 0.8
STRADA-239ENST00000639778 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
STRADA-239ENST00000639778 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
STRADA-239ENST00000639778 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
STRADA-239ENST00000639778 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
STRADA-239ENST00000639778 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
STRADA-239ENST00000639778 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
STRADA-239ENST00000639778 CUX2O14529 1486 aa19.72■□□□□ 0.75
STRADA-239ENST00000639778 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
STRADA-239ENST00000639778 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
STRADA-239ENST00000639778 CFTRP13569 1480 aa19.67■□□□□ 0.74
STRADA-239ENST00000639778 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
STRADA-239ENST00000639778 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
STRADA-239ENST00000639778 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
STRADA-239ENST00000639778 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.72
STRADA-239ENST00000639778 WDR62O43379 1518 aa19.48■□□□□ 0.71
STRADA-239ENST00000639778 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
STRADA-239ENST00000639778 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
STRADA-239ENST00000639778 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
STRADA-239ENST00000639778 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
STRADA-239ENST00000639778 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
STRADA-239ENST00000639778 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
STRADA-239ENST00000639778 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
STRADA-239ENST00000639778 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
STRADA-239ENST00000639778 CUX1P39880 1505 aa19.11■□□□□ 0.65
STRADA-239ENST00000639778 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
STRADA-239ENST00000639778 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
STRADA-239ENST00000639778 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
STRADA-239ENST00000639778 SOGA1O94964 1423 aa19.07■□□□□ 0.64
STRADA-239ENST00000639778 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
STRADA-239ENST00000639778 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
STRADA-239ENST00000639778 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
STRADA-239ENST00000639778 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.63
STRADA-239ENST00000639778 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
STRADA-239ENST00000639778 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
STRADA-239ENST00000639778 FBLN2P98095 1184 aa18.93■□□□□ 0.62
STRADA-239ENST00000639778 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
STRADA-239ENST00000639778 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
STRADA-239ENST00000639778 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
STRADA-239ENST00000639778 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
STRADA-239ENST00000639778 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
STRADA-239ENST00000639778 CHD1O14646 1710 aa18.83■□□□□ 0.61
STRADA-239ENST00000639778 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
STRADA-239ENST00000639778 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
STRADA-239ENST00000639778 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
STRADA-239ENST00000639778 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
STRADA-239ENST00000639778 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
STRADA-239ENST00000639778 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
STRADA-239ENST00000639778 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
STRADA-239ENST00000639778 MAGI1Q96QZ7 1491 aaPredicted RBP18.74■□□□□ 0.59
STRADA-239ENST00000639778 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
STRADA-239ENST00000639778 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
STRADA-239ENST00000639778 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
STRADA-239ENST00000639778 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
STRADA-239ENST00000639778 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
STRADA-239ENST00000639778 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
STRADA-239ENST00000639778 CYB5RLQ6IPT4 315 aa18.58■□□□□ 0.56
STRADA-239ENST00000639778 ERICH3Q5RHP9 1530 aa18.58■□□□□ 0.56
STRADA-239ENST00000639778 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
STRADA-239ENST00000639778 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
STRADA-239ENST00000639778 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
STRADA-239ENST00000639778 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
STRADA-239ENST00000639778 IGF1RP08069 1367 aa18.53■□□□□ 0.56
STRADA-239ENST00000639778 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
STRADA-239ENST00000639778 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
STRADA-239ENST00000639778 NUP160Q12769 1436 aa18.48■□□□□ 0.55
STRADA-239ENST00000639778 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
STRADA-239ENST00000639778 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
STRADA-239ENST00000639778 CARMIL1Q5VZK9 1371 aa18.42■□□□□ 0.54
STRADA-239ENST00000639778 CUL7Q14999 1698 aa18.38■□□□□ 0.53
STRADA-239ENST00000639778 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms