RNA–Protein interactions for RNA: ENST00000639495.1

KCNC1-209, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 2,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-209ENST00000639495 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
KCNC1-209ENST00000639495 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
KCNC1-209ENST00000639495 ABCC9O60706 1549 aa25.42■■□□□ 1.66
KCNC1-209ENST00000639495 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
KCNC1-209ENST00000639495 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
KCNC1-209ENST00000639495 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
KCNC1-209ENST00000639495 NACADO15069 1562 aa24.66■■□□□ 1.54
KCNC1-209ENST00000639495 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
KCNC1-209ENST00000639495 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
KCNC1-209ENST00000639495 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
KCNC1-209ENST00000639495 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.44
KCNC1-209ENST00000639495 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
KCNC1-209ENST00000639495 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
KCNC1-209ENST00000639495 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
KCNC1-209ENST00000639495 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
KCNC1-209ENST00000639495 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
KCNC1-209ENST00000639495 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
KCNC1-209ENST00000639495 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
KCNC1-209ENST00000639495 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
KCNC1-209ENST00000639495 RSF1Q96T23 1441 aaPredicted RBP23.01■■□□□ 1.27
KCNC1-209ENST00000639495 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
KCNC1-209ENST00000639495 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
KCNC1-209ENST00000639495 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
KCNC1-209ENST00000639495 WIZO95785 1651 aa22.89■■□□□ 1.25
KCNC1-209ENST00000639495 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
KCNC1-209ENST00000639495 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
KCNC1-209ENST00000639495 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
KCNC1-209ENST00000639495 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
KCNC1-209ENST00000639495 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
KCNC1-209ENST00000639495 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
KCNC1-209ENST00000639495 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
KCNC1-209ENST00000639495 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
KCNC1-209ENST00000639495 HRCP23327 699 aa22.26■■□□□ 1.15
KCNC1-209ENST00000639495 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
KCNC1-209ENST00000639495 NESP48681 1621 aa22.14■■□□□ 1.14
KCNC1-209ENST00000639495 CFTRP13569 1480 aa22.11■■□□□ 1.13
KCNC1-209ENST00000639495 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.13
KCNC1-209ENST00000639495 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
KCNC1-209ENST00000639495 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
KCNC1-209ENST00000639495 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
KCNC1-209ENST00000639495 FANCD2Q9BXW9 1451 aa21.92■■□□□ 1.1
KCNC1-209ENST00000639495 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
KCNC1-209ENST00000639495 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
KCNC1-209ENST00000639495 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
KCNC1-209ENST00000639495 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
KCNC1-209ENST00000639495 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
KCNC1-209ENST00000639495 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
KCNC1-209ENST00000639495 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
KCNC1-209ENST00000639495 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
KCNC1-209ENST00000639495 CUX1P39880 1505 aa21.64■■□□□ 1.05
KCNC1-209ENST00000639495 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
KCNC1-209ENST00000639495 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
KCNC1-209ENST00000639495 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
KCNC1-209ENST00000639495 PPARGC1BQ86YN6 1023 aaKnown RBP21.61■■□□□ 1.05
KCNC1-209ENST00000639495 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
KCNC1-209ENST00000639495 WDR62O43379 1518 aa21.58■■□□□ 1.05
KCNC1-209ENST00000639495 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
KCNC1-209ENST00000639495 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
KCNC1-209ENST00000639495 BIVM-ERCC5R4GMW8 1640 aa21.53■■□□□ 1.04
KCNC1-209ENST00000639495 PCGF6Q9BYE7 350 aa21.53■■□□□ 1.04
KCNC1-209ENST00000639495 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
KCNC1-209ENST00000639495 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
KCNC1-209ENST00000639495 CUX2O14529 1486 aa21.4■■□□□ 1.02
KCNC1-209ENST00000639495 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
KCNC1-209ENST00000639495 SOGA1O94964 1423 aa21.4■■□□□ 1.02
KCNC1-209ENST00000639495 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
KCNC1-209ENST00000639495 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
KCNC1-209ENST00000639495 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
KCNC1-209ENST00000639495 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
KCNC1-209ENST00000639495 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
KCNC1-209ENST00000639495 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
KCNC1-209ENST00000639495 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.98
KCNC1-209ENST00000639495 MYT1Q01538 1121 aa21.2■□□□□ 0.98
KCNC1-209ENST00000639495 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
KCNC1-209ENST00000639495 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
KCNC1-209ENST00000639495 FAM9AQ8IZU1 332 aaPredicted RBP21.17■□□□□ 0.98
KCNC1-209ENST00000639495 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
KCNC1-209ENST00000639495 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
KCNC1-209ENST00000639495 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.98
KCNC1-209ENST00000639495 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
KCNC1-209ENST00000639495 EEA1Q15075 1411 aa21.07■□□□□ 0.96
KCNC1-209ENST00000639495 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
KCNC1-209ENST00000639495 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
KCNC1-209ENST00000639495 IGF1RP08069 1367 aa21.05■□□□□ 0.96
KCNC1-209ENST00000639495 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
KCNC1-209ENST00000639495 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
KCNC1-209ENST00000639495 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
KCNC1-209ENST00000639495 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
KCNC1-209ENST00000639495 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
KCNC1-209ENST00000639495 CUL7Q14999 1698 aa20.92■□□□□ 0.94
KCNC1-209ENST00000639495 ADAMTS12P58397 1594 aa20.92■□□□□ 0.94
KCNC1-209ENST00000639495 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
KCNC1-209ENST00000639495 EHMT2Q96KQ7 1210 aa20.92■□□□□ 0.94
KCNC1-209ENST00000639495 FBLN2P98095 1184 aa20.91■□□□□ 0.94
KCNC1-209ENST00000639495 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
KCNC1-209ENST00000639495 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
KCNC1-209ENST00000639495 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
KCNC1-209ENST00000639495 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
KCNC1-209ENST00000639495 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
KCNC1-209ENST00000639495 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms