RNA–Protein interactions for RNA: ENST00000639347.1

RHOXF1P3-202, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 851 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-202ENST00000639347 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
RHOXF1P3-202ENST00000639347 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
RHOXF1P3-202ENST00000639347 ABCC9O60706 1549 aa24.82■■□□□ 1.56
RHOXF1P3-202ENST00000639347 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
RHOXF1P3-202ENST00000639347 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
RHOXF1P3-202ENST00000639347 NACADO15069 1562 aa23.82■■□□□ 1.4
RHOXF1P3-202ENST00000639347 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
RHOXF1P3-202ENST00000639347 MYO15BQ96JP2 1530 aa23.7■■□□□ 1.38
RHOXF1P3-202ENST00000639347 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
RHOXF1P3-202ENST00000639347 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
RHOXF1P3-202ENST00000639347 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
RHOXF1P3-202ENST00000639347 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
RHOXF1P3-202ENST00000639347 BICRAQ9NZM4 1560 aa23.19■■□□□ 1.3
RHOXF1P3-202ENST00000639347 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
RHOXF1P3-202ENST00000639347 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
RHOXF1P3-202ENST00000639347 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
RHOXF1P3-202ENST00000639347 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
RHOXF1P3-202ENST00000639347 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
RHOXF1P3-202ENST00000639347 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
RHOXF1P3-202ENST00000639347 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
RHOXF1P3-202ENST00000639347 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
RHOXF1P3-202ENST00000639347 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
RHOXF1P3-202ENST00000639347 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
RHOXF1P3-202ENST00000639347 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
RHOXF1P3-202ENST00000639347 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
RHOXF1P3-202ENST00000639347 RSF1Q96T23 1441 aaPredicted RBP21.95■■□□□ 1.1
RHOXF1P3-202ENST00000639347 WIZO95785 1651 aa21.91■■□□□ 1.1
RHOXF1P3-202ENST00000639347 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
RHOXF1P3-202ENST00000639347 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
RHOXF1P3-202ENST00000639347 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
RHOXF1P3-202ENST00000639347 NESP48681 1621 aa21.55■■□□□ 1.04
RHOXF1P3-202ENST00000639347 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
RHOXF1P3-202ENST00000639347 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
RHOXF1P3-202ENST00000639347 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
RHOXF1P3-202ENST00000639347 LAMC3Q9Y6N6 1575 aa21.37■■□□□ 1.01
RHOXF1P3-202ENST00000639347 CFTRP13569 1480 aa21.31■■□□□ 1
RHOXF1P3-202ENST00000639347 ERCC6Q03468 1493 aa21.31■■□□□ 1
RHOXF1P3-202ENST00000639347 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
RHOXF1P3-202ENST00000639347 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
RHOXF1P3-202ENST00000639347 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
RHOXF1P3-202ENST00000639347 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
RHOXF1P3-202ENST00000639347 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
RHOXF1P3-202ENST00000639347 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
RHOXF1P3-202ENST00000639347 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
RHOXF1P3-202ENST00000639347 CUX2O14529 1486 aa21■□□□□ 0.95
RHOXF1P3-202ENST00000639347 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
RHOXF1P3-202ENST00000639347 WDR62O43379 1518 aa20.97■□□□□ 0.95
RHOXF1P3-202ENST00000639347 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
RHOXF1P3-202ENST00000639347 DNMBPQ6XZF7 1577 aa20.8■□□□□ 0.92
RHOXF1P3-202ENST00000639347 CUX1P39880 1505 aa20.76■□□□□ 0.91
RHOXF1P3-202ENST00000639347 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
RHOXF1P3-202ENST00000639347 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
RHOXF1P3-202ENST00000639347 FGD5Q6ZNL6 1462 aa20.65■□□□□ 0.9
RHOXF1P3-202ENST00000639347 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
RHOXF1P3-202ENST00000639347 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
RHOXF1P3-202ENST00000639347 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
RHOXF1P3-202ENST00000639347 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
RHOXF1P3-202ENST00000639347 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
RHOXF1P3-202ENST00000639347 SOGA1O94964 1423 aa20.61■□□□□ 0.89
RHOXF1P3-202ENST00000639347 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
RHOXF1P3-202ENST00000639347 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
RHOXF1P3-202ENST00000639347 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
RHOXF1P3-202ENST00000639347 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.88
RHOXF1P3-202ENST00000639347 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RHOXF1P3-202ENST00000639347 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
RHOXF1P3-202ENST00000639347 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
RHOXF1P3-202ENST00000639347 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
RHOXF1P3-202ENST00000639347 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
RHOXF1P3-202ENST00000639347 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
RHOXF1P3-202ENST00000639347 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
RHOXF1P3-202ENST00000639347 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
RHOXF1P3-202ENST00000639347 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
RHOXF1P3-202ENST00000639347 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
RHOXF1P3-202ENST00000639347 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
RHOXF1P3-202ENST00000639347 FBLN2P98095 1184 aa20.24■□□□□ 0.83
RHOXF1P3-202ENST00000639347 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
RHOXF1P3-202ENST00000639347 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
RHOXF1P3-202ENST00000639347 CHD1O14646 1710 aa20.19■□□□□ 0.82
RHOXF1P3-202ENST00000639347 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
RHOXF1P3-202ENST00000639347 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
RHOXF1P3-202ENST00000639347 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
RHOXF1P3-202ENST00000639347 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
RHOXF1P3-202ENST00000639347 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
RHOXF1P3-202ENST00000639347 IGF1RP08069 1367 aa20.16■□□□□ 0.82
RHOXF1P3-202ENST00000639347 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
RHOXF1P3-202ENST00000639347 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
RHOXF1P3-202ENST00000639347 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
RHOXF1P3-202ENST00000639347 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
RHOXF1P3-202ENST00000639347 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
RHOXF1P3-202ENST00000639347 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
RHOXF1P3-202ENST00000639347 CEP170Q5SW79 1584 aa19.99■□□□□ 0.79
RHOXF1P3-202ENST00000639347 CUL7Q14999 1698 aa19.97■□□□□ 0.79
RHOXF1P3-202ENST00000639347 NUP160Q12769 1436 aa19.97■□□□□ 0.79
RHOXF1P3-202ENST00000639347 FAM9AQ8IZU1 332 aaPredicted RBP19.94■□□□□ 0.78
RHOXF1P3-202ENST00000639347 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
RHOXF1P3-202ENST00000639347 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
RHOXF1P3-202ENST00000639347 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
RHOXF1P3-202ENST00000639347 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
RHOXF1P3-202ENST00000639347 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
RHOXF1P3-202ENST00000639347 PRXQ9BXM0 1461 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms