RNA–Protein interactions for RNA: ENST00000639325.1

KCNC1-208, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-208ENST00000639325 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
KCNC1-208ENST00000639325 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
KCNC1-208ENST00000639325 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
KCNC1-208ENST00000639325 CCDC180Q9P1Z9 1646 aa19.35■□□□□ 0.69
KCNC1-208ENST00000639325 ABCC9O60706 1549 aa18.72■□□□□ 0.59
KCNC1-208ENST00000639325 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
KCNC1-208ENST00000639325 NACADO15069 1562 aa18.15■□□□□ 0.5
KCNC1-208ENST00000639325 MYO15BQ96JP2 1530 aa18.15■□□□□ 0.5
KCNC1-208ENST00000639325 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
KCNC1-208ENST00000639325 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
KCNC1-208ENST00000639325 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
KCNC1-208ENST00000639325 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
KCNC1-208ENST00000639325 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
KCNC1-208ENST00000639325 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
KCNC1-208ENST00000639325 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
KCNC1-208ENST00000639325 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
KCNC1-208ENST00000639325 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
KCNC1-208ENST00000639325 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
KCNC1-208ENST00000639325 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
KCNC1-208ENST00000639325 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
KCNC1-208ENST00000639325 CECR2Q9BXF3 1484 aa17.03■□□□□ 0.32
KCNC1-208ENST00000639325 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.31
KCNC1-208ENST00000639325 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
KCNC1-208ENST00000639325 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
KCNC1-208ENST00000639325 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
KCNC1-208ENST00000639325 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
KCNC1-208ENST00000639325 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
KCNC1-208ENST00000639325 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
KCNC1-208ENST00000639325 NCAPD3P42695 1498 aa16.77■□□□□ 0.27
KCNC1-208ENST00000639325 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
KCNC1-208ENST00000639325 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
KCNC1-208ENST00000639325 WIZO95785 1651 aa16.69■□□□□ 0.26
KCNC1-208ENST00000639325 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
KCNC1-208ENST00000639325 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
KCNC1-208ENST00000639325 FOXD1Q16676 465 aa16.57■□□□□ 0.24
KCNC1-208ENST00000639325 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
KCNC1-208ENST00000639325 SUPT5HO00267 1087 aaKnown RBP16.41■□□□□ 0.22
KCNC1-208ENST00000639325 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
KCNC1-208ENST00000639325 NESP48681 1621 aa16.28■□□□□ 0.2
KCNC1-208ENST00000639325 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
KCNC1-208ENST00000639325 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
KCNC1-208ENST00000639325 CFTRP13569 1480 aa16.23■□□□□ 0.19
KCNC1-208ENST00000639325 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
KCNC1-208ENST00000639325 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
KCNC1-208ENST00000639325 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
KCNC1-208ENST00000639325 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
KCNC1-208ENST00000639325 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
KCNC1-208ENST00000639325 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
KCNC1-208ENST00000639325 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
KCNC1-208ENST00000639325 THOC2Q8NI27 1593 aaKnown RBP15.99■□□□□ 0.15
KCNC1-208ENST00000639325 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.15
KCNC1-208ENST00000639325 WDR62O43379 1518 aa15.92■□□□□ 0.14
KCNC1-208ENST00000639325 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
KCNC1-208ENST00000639325 CUX2O14529 1486 aa15.89■□□□□ 0.13
KCNC1-208ENST00000639325 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
KCNC1-208ENST00000639325 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
KCNC1-208ENST00000639325 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
KCNC1-208ENST00000639325 CUX1P39880 1505 aa15.8■□□□□ 0.12
KCNC1-208ENST00000639325 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
KCNC1-208ENST00000639325 MSH5O43196 834 aa15.75■□□□□ 0.11
KCNC1-208ENST00000639325 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
KCNC1-208ENST00000639325 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
KCNC1-208ENST00000639325 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
KCNC1-208ENST00000639325 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
KCNC1-208ENST00000639325 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
KCNC1-208ENST00000639325 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
KCNC1-208ENST00000639325 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
KCNC1-208ENST00000639325 SOGA1O94964 1423 aa15.65■□□□□ 0.1
KCNC1-208ENST00000639325 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
KCNC1-208ENST00000639325 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
KCNC1-208ENST00000639325 WDR97A6NE52 1622 aa15.59■□□□□ 0.09
KCNC1-208ENST00000639325 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.08
KCNC1-208ENST00000639325 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
KCNC1-208ENST00000639325 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
KCNC1-208ENST00000639325 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
KCNC1-208ENST00000639325 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
KCNC1-208ENST00000639325 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
KCNC1-208ENST00000639325 GAPVD1Q14C86 1478 aa15.48■□□□□ 0.07
KCNC1-208ENST00000639325 GRIN2BQ13224 1484 aa15.44■□□□□ 0.06
KCNC1-208ENST00000639325 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
KCNC1-208ENST00000639325 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
KCNC1-208ENST00000639325 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
KCNC1-208ENST00000639325 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
KCNC1-208ENST00000639325 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
KCNC1-208ENST00000639325 IGF1RP08069 1367 aa15.36■□□□□ 0.05
KCNC1-208ENST00000639325 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
KCNC1-208ENST00000639325 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
KCNC1-208ENST00000639325 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
KCNC1-208ENST00000639325 CHD1O14646 1710 aa15.31■□□□□ 0.04
KCNC1-208ENST00000639325 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
KCNC1-208ENST00000639325 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
KCNC1-208ENST00000639325 CUL7Q14999 1698 aa15.27■□□□□ 0.04
KCNC1-208ENST00000639325 FBLN2P98095 1184 aa15.27■□□□□ 0.03
KCNC1-208ENST00000639325 OSCARQ8IYS5 282 aa15.27■□□□□ 0.03
KCNC1-208ENST00000639325 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
KCNC1-208ENST00000639325 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
KCNC1-208ENST00000639325 CARMIL1Q5VZK9 1371 aa15.25■□□□□ 0.03
KCNC1-208ENST00000639325 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
KCNC1-208ENST00000639325 EEA1Q15075 1411 aa15.25■□□□□ 0.03
KCNC1-208ENST00000639325 ADRA2BP18089 450 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms