RNA–Protein interactions for RNA: ENST00000639321.1

KCNMA1-256, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-256ENST00000639321 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
KCNMA1-256ENST00000639321 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.75
KCNMA1-256ENST00000639321 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
KCNMA1-256ENST00000639321 ABCC9O60706 1549 aa18.72■□□□□ 0.59
KCNMA1-256ENST00000639321 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
KCNMA1-256ENST00000639321 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
KCNMA1-256ENST00000639321 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
KCNMA1-256ENST00000639321 NACADO15069 1562 aa18.4■□□□□ 0.54
KCNMA1-256ENST00000639321 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
KCNMA1-256ENST00000639321 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
KCNMA1-256ENST00000639321 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
KCNMA1-256ENST00000639321 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
KCNMA1-256ENST00000639321 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
KCNMA1-256ENST00000639321 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
KCNMA1-256ENST00000639321 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
KCNMA1-256ENST00000639321 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-256ENST00000639321 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
KCNMA1-256ENST00000639321 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
KCNMA1-256ENST00000639321 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-256ENST00000639321 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
KCNMA1-256ENST00000639321 WIZO95785 1651 aa17.25■□□□□ 0.35
KCNMA1-256ENST00000639321 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-256ENST00000639321 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.34
KCNMA1-256ENST00000639321 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
KCNMA1-256ENST00000639321 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
KCNMA1-256ENST00000639321 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
KCNMA1-256ENST00000639321 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
KCNMA1-256ENST00000639321 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
KCNMA1-256ENST00000639321 HMGXB3Q12766 1538 aa16.95■□□□□ 0.3
KCNMA1-256ENST00000639321 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
KCNMA1-256ENST00000639321 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
KCNMA1-256ENST00000639321 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
KCNMA1-256ENST00000639321 HRCP23327 699 aa16.74■□□□□ 0.27
KCNMA1-256ENST00000639321 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
KCNMA1-256ENST00000639321 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
KCNMA1-256ENST00000639321 CFTRP13569 1480 aa16.52■□□□□ 0.24
KCNMA1-256ENST00000639321 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-256ENST00000639321 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
KCNMA1-256ENST00000639321 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
KCNMA1-256ENST00000639321 ABCC8Q09428 1581 aa16.46■□□□□ 0.22
KCNMA1-256ENST00000639321 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
KCNMA1-256ENST00000639321 NESP48681 1621 aa16.39■□□□□ 0.21
KCNMA1-256ENST00000639321 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
KCNMA1-256ENST00000639321 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
KCNMA1-256ENST00000639321 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
KCNMA1-256ENST00000639321 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
KCNMA1-256ENST00000639321 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
KCNMA1-256ENST00000639321 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-256ENST00000639321 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
KCNMA1-256ENST00000639321 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
KCNMA1-256ENST00000639321 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
KCNMA1-256ENST00000639321 CUX1P39880 1505 aa16.25■□□□□ 0.19
KCNMA1-256ENST00000639321 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
KCNMA1-256ENST00000639321 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
KCNMA1-256ENST00000639321 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
KCNMA1-256ENST00000639321 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-256ENST00000639321 TOPBP1Q92547 1522 aa16.14■□□□□ 0.17
KCNMA1-256ENST00000639321 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
KCNMA1-256ENST00000639321 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
KCNMA1-256ENST00000639321 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
KCNMA1-256ENST00000639321 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
KCNMA1-256ENST00000639321 SOGA1O94964 1423 aa16.07■□□□□ 0.16
KCNMA1-256ENST00000639321 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-256ENST00000639321 EEA1Q15075 1411 aa16.06■□□□□ 0.16
KCNMA1-256ENST00000639321 POLA1P09884 1462 aaPredicted RBP16.04■□□□□ 0.16
KCNMA1-256ENST00000639321 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-256ENST00000639321 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
KCNMA1-256ENST00000639321 WDR62O43379 1518 aa16.03■□□□□ 0.16
KCNMA1-256ENST00000639321 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
KCNMA1-256ENST00000639321 MYT1Q01538 1121 aa15.97■□□□□ 0.15
KCNMA1-256ENST00000639321 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
KCNMA1-256ENST00000639321 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
KCNMA1-256ENST00000639321 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.14
KCNMA1-256ENST00000639321 CUX2O14529 1486 aa15.95■□□□□ 0.14
KCNMA1-256ENST00000639321 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
KCNMA1-256ENST00000639321 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
KCNMA1-256ENST00000639321 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
KCNMA1-256ENST00000639321 KIF21BO75037 1637 aa15.89■□□□□ 0.13
KCNMA1-256ENST00000639321 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
KCNMA1-256ENST00000639321 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
KCNMA1-256ENST00000639321 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
KCNMA1-256ENST00000639321 GOLGA3Q08378 1498 aa15.83■□□□□ 0.13
KCNMA1-256ENST00000639321 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
KCNMA1-256ENST00000639321 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
KCNMA1-256ENST00000639321 GAPVD1Q14C86 1478 aa15.81■□□□□ 0.12
KCNMA1-256ENST00000639321 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
KCNMA1-256ENST00000639321 IGF1RP08069 1367 aa15.8■□□□□ 0.12
KCNMA1-256ENST00000639321 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
KCNMA1-256ENST00000639321 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
KCNMA1-256ENST00000639321 CUL7Q14999 1698 aa15.8■□□□□ 0.12
KCNMA1-256ENST00000639321 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
KCNMA1-256ENST00000639321 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
KCNMA1-256ENST00000639321 ZNF608Q9ULD9 1512 aaPredicted RBP15.76■□□□□ 0.11
KCNMA1-256ENST00000639321 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
KCNMA1-256ENST00000639321 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
KCNMA1-256ENST00000639321 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
KCNMA1-256ENST00000639321 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
KCNMA1-256ENST00000639321 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
KCNMA1-256ENST00000639321 ADAMTS12P58397 1594 aa15.68■□□□□ 0.1
KCNMA1-256ENST00000639321 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms