RNA–Protein interactions for RNA: ENST00000639204.1

KCNMA1-253, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-253ENST00000639204 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
KCNMA1-253ENST00000639204 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
KCNMA1-253ENST00000639204 CHIC1Q5VXU3 224 aa16.26■□□□□ 0.19
KCNMA1-253ENST00000639204 ABCC9O60706 1549 aa16.23■□□□□ 0.19
KCNMA1-253ENST00000639204 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
KCNMA1-253ENST00000639204 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.06
KCNMA1-253ENST00000639204 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
KCNMA1-253ENST00000639204 NACADO15069 1562 aa15.21■□□□□ 0.03
KCNMA1-253ENST00000639204 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
KCNMA1-253ENST00000639204 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
KCNMA1-253ENST00000639204 UNC13AQ9UPW8 1703 aa14.96□□□□□ -0.01
KCNMA1-253ENST00000639204 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
KCNMA1-253ENST00000639204 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
KCNMA1-253ENST00000639204 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
KCNMA1-253ENST00000639204 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
KCNMA1-253ENST00000639204 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
KCNMA1-253ENST00000639204 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
KCNMA1-253ENST00000639204 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
KCNMA1-253ENST00000639204 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
KCNMA1-253ENST00000639204 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
KCNMA1-253ENST00000639204 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
KCNMA1-253ENST00000639204 MYT1Q01538 1121 aa14.44□□□□□ -0.1
KCNMA1-253ENST00000639204 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
KCNMA1-253ENST00000639204 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.12
KCNMA1-253ENST00000639204 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
KCNMA1-253ENST00000639204 CUX2O14529 1486 aa14.13□□□□□ -0.15
KCNMA1-253ENST00000639204 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
KCNMA1-253ENST00000639204 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
KCNMA1-253ENST00000639204 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
KCNMA1-253ENST00000639204 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
KCNMA1-253ENST00000639204 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
KCNMA1-253ENST00000639204 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
KCNMA1-253ENST00000639204 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
KCNMA1-253ENST00000639204 NESP48681 1621 aa13.86□□□□□ -0.19
KCNMA1-253ENST00000639204 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
KCNMA1-253ENST00000639204 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
KCNMA1-253ENST00000639204 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
KCNMA1-253ENST00000639204 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.21
KCNMA1-253ENST00000639204 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
KCNMA1-253ENST00000639204 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
KCNMA1-253ENST00000639204 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
KCNMA1-253ENST00000639204 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
KCNMA1-253ENST00000639204 TRIM41Q8WV44 630 aa13.64□□□□□ -0.23
KCNMA1-253ENST00000639204 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
KCNMA1-253ENST00000639204 RSF1Q96T23 1441 aaPredicted RBP13.62□□□□□ -0.23
KCNMA1-253ENST00000639204 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
KCNMA1-253ENST00000639204 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
KCNMA1-253ENST00000639204 WDR62O43379 1518 aa13.54□□□□□ -0.24
KCNMA1-253ENST00000639204 WIZO95785 1651 aa13.49□□□□□ -0.25
KCNMA1-253ENST00000639204 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
KCNMA1-253ENST00000639204 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
KCNMA1-253ENST00000639204 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
KCNMA1-253ENST00000639204 CFTRP13569 1480 aa13.4□□□□□ -0.26
KCNMA1-253ENST00000639204 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-253ENST00000639204 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.29
KCNMA1-253ENST00000639204 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
KCNMA1-253ENST00000639204 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
KCNMA1-253ENST00000639204 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
KCNMA1-253ENST00000639204 FOXD1Q16676 465 aa13.25□□□□□ -0.29
KCNMA1-253ENST00000639204 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-253ENST00000639204 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
KCNMA1-253ENST00000639204 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
KCNMA1-253ENST00000639204 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
KCNMA1-253ENST00000639204 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
KCNMA1-253ENST00000639204 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
KCNMA1-253ENST00000639204 HRCP23327 699 aa13.19□□□□□ -0.3
KCNMA1-253ENST00000639204 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
KCNMA1-253ENST00000639204 APLP2Q06481 763 aa13.15□□□□□ -0.3
KCNMA1-253ENST00000639204 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
KCNMA1-253ENST00000639204 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
KCNMA1-253ENST00000639204 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
KCNMA1-253ENST00000639204 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
KCNMA1-253ENST00000639204 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
KCNMA1-253ENST00000639204 EIF4G3O43432 1585 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-253ENST00000639204 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
KCNMA1-253ENST00000639204 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-253ENST00000639204 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.32
KCNMA1-253ENST00000639204 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
KCNMA1-253ENST00000639204 CHD1O14646 1710 aa13.04□□□□□ -0.32
KCNMA1-253ENST00000639204 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
KCNMA1-253ENST00000639204 FBLN2P98095 1184 aa13.04□□□□□ -0.32
KCNMA1-253ENST00000639204 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-253ENST00000639204 SOGA1O94964 1423 aa12.95□□□□□ -0.34
KCNMA1-253ENST00000639204 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
KCNMA1-253ENST00000639204 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
KCNMA1-253ENST00000639204 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
KCNMA1-253ENST00000639204 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
KCNMA1-253ENST00000639204 CLASP1Q7Z460 1538 aa12.91□□□□□ -0.34
KCNMA1-253ENST00000639204 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
KCNMA1-253ENST00000639204 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-253ENST00000639204 BCL11AQ9H165 835 aa12.89□□□□□ -0.35
KCNMA1-253ENST00000639204 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
KCNMA1-253ENST00000639204 MAGI1Q96QZ7 1491 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-253ENST00000639204 FAM9AQ8IZU1 332 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-253ENST00000639204 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
KCNMA1-253ENST00000639204 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
KCNMA1-253ENST00000639204 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
KCNMA1-253ENST00000639204 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
KCNMA1-253ENST00000639204 CUX1P39880 1505 aa12.81□□□□□ -0.36
KCNMA1-253ENST00000639204 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms