RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
SPIN3-219ENST00000639053 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.5
SPIN3-219ENST00000639053 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
SPIN3-219ENST00000639053 ABCC9O60706 1549 aa29.36■■■□□ 2.29
SPIN3-219ENST00000639053 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
SPIN3-219ENST00000639053 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
SPIN3-219ENST00000639053 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
SPIN3-219ENST00000639053 NACADO15069 1562 aa28.67■■■□□ 2.18
SPIN3-219ENST00000639053 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
SPIN3-219ENST00000639053 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
SPIN3-219ENST00000639053 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
SPIN3-219ENST00000639053 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
SPIN3-219ENST00000639053 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
SPIN3-219ENST00000639053 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
SPIN3-219ENST00000639053 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
SPIN3-219ENST00000639053 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
SPIN3-219ENST00000639053 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
SPIN3-219ENST00000639053 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
SPIN3-219ENST00000639053 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
SPIN3-219ENST00000639053 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
SPIN3-219ENST00000639053 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
SPIN3-219ENST00000639053 WIZO95785 1651 aa26.84■■□□□ 1.89
SPIN3-219ENST00000639053 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
SPIN3-219ENST00000639053 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
SPIN3-219ENST00000639053 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
SPIN3-219ENST00000639053 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
SPIN3-219ENST00000639053 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
SPIN3-219ENST00000639053 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
SPIN3-219ENST00000639053 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
SPIN3-219ENST00000639053 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
SPIN3-219ENST00000639053 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
SPIN3-219ENST00000639053 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
SPIN3-219ENST00000639053 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
SPIN3-219ENST00000639053 CFTRP13569 1480 aa25.79■■□□□ 1.72
SPIN3-219ENST00000639053 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
SPIN3-219ENST00000639053 NESP48681 1621 aa25.68■■□□□ 1.7
SPIN3-219ENST00000639053 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
SPIN3-219ENST00000639053 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
SPIN3-219ENST00000639053 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
SPIN3-219ENST00000639053 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
SPIN3-219ENST00000639053 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
SPIN3-219ENST00000639053 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.67
SPIN3-219ENST00000639053 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
SPIN3-219ENST00000639053 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
SPIN3-219ENST00000639053 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
SPIN3-219ENST00000639053 CUX1P39880 1505 aa25.34■■□□□ 1.65
SPIN3-219ENST00000639053 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
SPIN3-219ENST00000639053 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
SPIN3-219ENST00000639053 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
SPIN3-219ENST00000639053 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
SPIN3-219ENST00000639053 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
SPIN3-219ENST00000639053 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
SPIN3-219ENST00000639053 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
SPIN3-219ENST00000639053 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.62
SPIN3-219ENST00000639053 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
SPIN3-219ENST00000639053 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
SPIN3-219ENST00000639053 SOGA1O94964 1423 aa25.09■■□□□ 1.61
SPIN3-219ENST00000639053 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
SPIN3-219ENST00000639053 RUSC2Q8N2Y8 1516 aa25.03■■□□□ 1.6
SPIN3-219ENST00000639053 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
SPIN3-219ENST00000639053 WDR62O43379 1518 aa25.01■■□□□ 1.59
SPIN3-219ENST00000639053 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
SPIN3-219ENST00000639053 EEA1Q15075 1411 aa24.94■■□□□ 1.58
SPIN3-219ENST00000639053 CUX2O14529 1486 aa24.89■■□□□ 1.58
SPIN3-219ENST00000639053 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
SPIN3-219ENST00000639053 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
SPIN3-219ENST00000639053 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
SPIN3-219ENST00000639053 LOC105371045A0A1W2PR82 267 aa24.84■■□□□ 1.57
SPIN3-219ENST00000639053 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
SPIN3-219ENST00000639053 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
SPIN3-219ENST00000639053 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
SPIN3-219ENST00000639053 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
SPIN3-219ENST00000639053 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
SPIN3-219ENST00000639053 IGF1RP08069 1367 aa24.7■■□□□ 1.54
SPIN3-219ENST00000639053 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
SPIN3-219ENST00000639053 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
SPIN3-219ENST00000639053 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
SPIN3-219ENST00000639053 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
SPIN3-219ENST00000639053 KIF21BO75037 1637 aa24.64■■□□□ 1.54
SPIN3-219ENST00000639053 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
SPIN3-219ENST00000639053 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
SPIN3-219ENST00000639053 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
SPIN3-219ENST00000639053 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
SPIN3-219ENST00000639053 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
SPIN3-219ENST00000639053 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
SPIN3-219ENST00000639053 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
SPIN3-219ENST00000639053 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
SPIN3-219ENST00000639053 CUL7Q14999 1698 aa24.51■■□□□ 1.51
SPIN3-219ENST00000639053 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
SPIN3-219ENST00000639053 TNIKQ9UKE5 1360 aa24.46■■□□□ 1.51
SPIN3-219ENST00000639053 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
SPIN3-219ENST00000639053 ADAMTS12P58397 1594 aa24.41■■□□□ 1.5
SPIN3-219ENST00000639053 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
SPIN3-219ENST00000639053 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
SPIN3-219ENST00000639053 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
SPIN3-219ENST00000639053 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
SPIN3-219ENST00000639053 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
SPIN3-219ENST00000639053 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
SPIN3-219ENST00000639053 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
SPIN3-219ENST00000639053 CLIP1P30622 1438 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms