RNA–Protein interactions for RNA: ENST00000639006.1

PAX6-248, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-248ENST00000639006 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
PAX6-248ENST00000639006 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
PAX6-248ENST00000639006 ABCC9O60706 1549 aa22.12■■□□□ 1.13
PAX6-248ENST00000639006 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.02
PAX6-248ENST00000639006 NACADO15069 1562 aa21.31■■□□□ 1
PAX6-248ENST00000639006 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
PAX6-248ENST00000639006 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■■□□□ 1
PAX6-248ENST00000639006 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
PAX6-248ENST00000639006 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.98
PAX6-248ENST00000639006 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
PAX6-248ENST00000639006 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
PAX6-248ENST00000639006 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
PAX6-248ENST00000639006 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
PAX6-248ENST00000639006 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
PAX6-248ENST00000639006 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
PAX6-248ENST00000639006 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
PAX6-248ENST00000639006 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
PAX6-248ENST00000639006 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
PAX6-248ENST00000639006 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
PAX6-248ENST00000639006 SMARCA4P51532 1647 aa19.78■□□□□ 0.76
PAX6-248ENST00000639006 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
PAX6-248ENST00000639006 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
PAX6-248ENST00000639006 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
PAX6-248ENST00000639006 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
PAX6-248ENST00000639006 PEG3Q9GZU2 1588 aa19.6■□□□□ 0.73
PAX6-248ENST00000639006 HMGXB3Q12766 1538 aa19.55■□□□□ 0.72
PAX6-248ENST00000639006 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
PAX6-248ENST00000639006 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
PAX6-248ENST00000639006 WIZO95785 1651 aa19.46■□□□□ 0.7
PAX6-248ENST00000639006 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
PAX6-248ENST00000639006 NESP48681 1621 aa19.17■□□□□ 0.66
PAX6-248ENST00000639006 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
PAX6-248ENST00000639006 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
PAX6-248ENST00000639006 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
PAX6-248ENST00000639006 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
PAX6-248ENST00000639006 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
PAX6-248ENST00000639006 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
PAX6-248ENST00000639006 CFTRP13569 1480 aa19.01■□□□□ 0.63
PAX6-248ENST00000639006 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
PAX6-248ENST00000639006 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
PAX6-248ENST00000639006 CUX2O14529 1486 aa18.85■□□□□ 0.61
PAX6-248ENST00000639006 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.61
PAX6-248ENST00000639006 THOC2Q8NI27 1593 aaKnown RBP18.82■□□□□ 0.6
PAX6-248ENST00000639006 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
PAX6-248ENST00000639006 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
PAX6-248ENST00000639006 WDR62O43379 1518 aa18.72■□□□□ 0.59
PAX6-248ENST00000639006 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
PAX6-248ENST00000639006 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
PAX6-248ENST00000639006 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
PAX6-248ENST00000639006 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
PAX6-248ENST00000639006 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
PAX6-248ENST00000639006 CUX1P39880 1505 aa18.45■□□□□ 0.54
PAX6-248ENST00000639006 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
PAX6-248ENST00000639006 SOGA1O94964 1423 aa18.39■□□□□ 0.53
PAX6-248ENST00000639006 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
PAX6-248ENST00000639006 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
PAX6-248ENST00000639006 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
PAX6-248ENST00000639006 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
PAX6-248ENST00000639006 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
PAX6-248ENST00000639006 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
PAX6-248ENST00000639006 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
PAX6-248ENST00000639006 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
PAX6-248ENST00000639006 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
PAX6-248ENST00000639006 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.52
PAX6-248ENST00000639006 DNAJC5Q9H3Z4 198 aa18.27■□□□□ 0.51
PAX6-248ENST00000639006 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
PAX6-248ENST00000639006 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
PAX6-248ENST00000639006 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
PAX6-248ENST00000639006 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
PAX6-248ENST00000639006 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
PAX6-248ENST00000639006 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
PAX6-248ENST00000639006 ABCA5Q8WWZ7 1642 aa18.11■□□□□ 0.49
PAX6-248ENST00000639006 FBLN2P98095 1184 aa18.08■□□□□ 0.49
PAX6-248ENST00000639006 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
PAX6-248ENST00000639006 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
PAX6-248ENST00000639006 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
PAX6-248ENST00000639006 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
PAX6-248ENST00000639006 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
PAX6-248ENST00000639006 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
PAX6-248ENST00000639006 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
PAX6-248ENST00000639006 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
PAX6-248ENST00000639006 CHD1O14646 1710 aa18■□□□□ 0.47
PAX6-248ENST00000639006 IGF1RP08069 1367 aa17.96■□□□□ 0.46
PAX6-248ENST00000639006 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
PAX6-248ENST00000639006 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
PAX6-248ENST00000639006 GRIN2AQ12879 1464 aa17.89■□□□□ 0.46
PAX6-248ENST00000639006 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
PAX6-248ENST00000639006 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
PAX6-248ENST00000639006 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
PAX6-248ENST00000639006 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
PAX6-248ENST00000639006 NUP160Q12769 1436 aa17.82■□□□□ 0.44
PAX6-248ENST00000639006 CUL7Q14999 1698 aa17.81■□□□□ 0.44
PAX6-248ENST00000639006 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
PAX6-248ENST00000639006 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
PAX6-248ENST00000639006 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
PAX6-248ENST00000639006 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
PAX6-248ENST00000639006 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
PAX6-248ENST00000639006 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
PAX6-248ENST00000639006 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
PAX6-248ENST00000639006 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms