RNA–Protein interactions for RNA: ENST00000638942.1

NFE4-202, Transcript of nuclear factor, erythroid 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NFE4, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-202ENST00000638942 NISCHQ9Y2I1 1504 aa27.85■■■□□ 2.05
NFE4-202ENST00000638942 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
NFE4-202ENST00000638942 ABCC9O60706 1549 aa24.31■■□□□ 1.48
NFE4-202ENST00000638942 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
NFE4-202ENST00000638942 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
NFE4-202ENST00000638942 NACADO15069 1562 aa23.27■■□□□ 1.32
NFE4-202ENST00000638942 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
NFE4-202ENST00000638942 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
NFE4-202ENST00000638942 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
NFE4-202ENST00000638942 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
NFE4-202ENST00000638942 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
NFE4-202ENST00000638942 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
NFE4-202ENST00000638942 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
NFE4-202ENST00000638942 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
NFE4-202ENST00000638942 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
NFE4-202ENST00000638942 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
NFE4-202ENST00000638942 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
NFE4-202ENST00000638942 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
NFE4-202ENST00000638942 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
NFE4-202ENST00000638942 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
NFE4-202ENST00000638942 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
NFE4-202ENST00000638942 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
NFE4-202ENST00000638942 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
NFE4-202ENST00000638942 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
NFE4-202ENST00000638942 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
NFE4-202ENST00000638942 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
NFE4-202ENST00000638942 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
NFE4-202ENST00000638942 PEG3Q9GZU2 1588 aa21.33■■□□□ 1.01
NFE4-202ENST00000638942 WIZO95785 1651 aa21.3■■□□□ 1
NFE4-202ENST00000638942 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
NFE4-202ENST00000638942 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
NFE4-202ENST00000638942 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
NFE4-202ENST00000638942 NESP48681 1621 aa21.01■□□□□ 0.95
NFE4-202ENST00000638942 ERCC6Q03468 1493 aa21■□□□□ 0.95
NFE4-202ENST00000638942 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
NFE4-202ENST00000638942 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
NFE4-202ENST00000638942 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
NFE4-202ENST00000638942 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
NFE4-202ENST00000638942 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
NFE4-202ENST00000638942 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
NFE4-202ENST00000638942 CFTRP13569 1480 aa20.71■□□□□ 0.91
NFE4-202ENST00000638942 CUX2O14529 1486 aa20.65■□□□□ 0.9
NFE4-202ENST00000638942 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
NFE4-202ENST00000638942 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.9
NFE4-202ENST00000638942 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
NFE4-202ENST00000638942 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
NFE4-202ENST00000638942 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
NFE4-202ENST00000638942 WDR62O43379 1518 aa20.48■□□□□ 0.87
NFE4-202ENST00000638942 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
NFE4-202ENST00000638942 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
NFE4-202ENST00000638942 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
NFE4-202ENST00000638942 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
NFE4-202ENST00000638942 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
NFE4-202ENST00000638942 CUX1P39880 1505 aa20.17■□□□□ 0.82
NFE4-202ENST00000638942 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
NFE4-202ENST00000638942 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
NFE4-202ENST00000638942 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
NFE4-202ENST00000638942 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
NFE4-202ENST00000638942 SOGA1O94964 1423 aa20.09■□□□□ 0.81
NFE4-202ENST00000638942 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
NFE4-202ENST00000638942 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
NFE4-202ENST00000638942 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
NFE4-202ENST00000638942 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
NFE4-202ENST00000638942 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
NFE4-202ENST00000638942 SYNJ1O43426 1573 aa20■□□□□ 0.79
NFE4-202ENST00000638942 TDRD9Q8NDG6 1382 aaKnown RBP19.99■□□□□ 0.79
NFE4-202ENST00000638942 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
NFE4-202ENST00000638942 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
NFE4-202ENST00000638942 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
NFE4-202ENST00000638942 FBLN2P98095 1184 aa19.89■□□□□ 0.77
NFE4-202ENST00000638942 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
NFE4-202ENST00000638942 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
NFE4-202ENST00000638942 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
NFE4-202ENST00000638942 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
NFE4-202ENST00000638942 GRIN2BQ13224 1484 aa19.83■□□□□ 0.76
NFE4-202ENST00000638942 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
NFE4-202ENST00000638942 CHD1O14646 1710 aa19.82■□□□□ 0.76
NFE4-202ENST00000638942 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
NFE4-202ENST00000638942 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
NFE4-202ENST00000638942 MAGI1Q96QZ7 1491 aaPredicted RBP19.76■□□□□ 0.75
NFE4-202ENST00000638942 SYNJ2O15056 1496 aa19.69■□□□□ 0.74
NFE4-202ENST00000638942 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
NFE4-202ENST00000638942 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
NFE4-202ENST00000638942 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
NFE4-202ENST00000638942 ADAMTS12P58397 1594 aa19.64■□□□□ 0.73
NFE4-202ENST00000638942 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
NFE4-202ENST00000638942 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
NFE4-202ENST00000638942 RIMBP3CA6NJZ7 1639 aa19.52■□□□□ 0.72
NFE4-202ENST00000638942 RIMBP3BA6NNM3 1639 aa19.52■□□□□ 0.72
NFE4-202ENST00000638942 RIMBP3Q9UFD9 1639 aa19.52■□□□□ 0.72
NFE4-202ENST00000638942 IGF1RP08069 1367 aa19.52■□□□□ 0.72
NFE4-202ENST00000638942 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
NFE4-202ENST00000638942 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
NFE4-202ENST00000638942 CUL7Q14999 1698 aa19.5■□□□□ 0.71
NFE4-202ENST00000638942 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
NFE4-202ENST00000638942 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
NFE4-202ENST00000638942 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
NFE4-202ENST00000638942 NUP160Q12769 1436 aa19.44■□□□□ 0.7
NFE4-202ENST00000638942 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
NFE4-202ENST00000638942 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms